Experiment: bismuth(III) chloride 0.000025 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1916 and Pf6N2E2_1917 overlap by 11 nucleotides Pf6N2E2_1917 and Pf6N2E2_1918 are separated by 498 nucleotides
Pf6N2E2_1916 - Transcriptional regulator, LysR family, at 2,270,692 to 2,270,970
_1916
Pf6N2E2_1917 - hypothetical protein, at 2,270,960 to 2,271,241
_1917
Pf6N2E2_1918 - Major facilitator family transporter, at 2,271,740 to 2,272,900
_1918
Position (kb)
2270
2271
2272 Strain fitness (log2 ratio)
-1
0
1
2 at 2269.996 kb on - strand at 2270.066 kb on - strand at 2270.109 kb on - strand at 2270.109 kb on - strand at 2270.109 kb on - strand at 2270.111 kb on - strand at 2270.208 kb on + strand at 2270.209 kb on - strand at 2270.209 kb on - strand at 2270.244 kb on - strand at 2270.461 kb on - strand at 2270.461 kb on - strand at 2270.461 kb on - strand at 2270.596 kb on - strand at 2270.596 kb on - strand at 2270.634 kb on + strand at 2270.657 kb on - strand at 2270.705 kb on - strand at 2270.705 kb on - strand at 2270.705 kb on - strand at 2270.705 kb on - strand at 2270.705 kb on - strand at 2270.705 kb on - strand at 2270.839 kb on - strand, within Pf6N2E2_1916 at 2270.839 kb on - strand, within Pf6N2E2_1916 at 2270.839 kb on - strand, within Pf6N2E2_1916 at 2270.860 kb on + strand, within Pf6N2E2_1916 at 2270.861 kb on - strand, within Pf6N2E2_1916 at 2270.861 kb on - strand, within Pf6N2E2_1916 at 2271.155 kb on - strand, within Pf6N2E2_1917 at 2271.156 kb on + strand, within Pf6N2E2_1917 at 2271.157 kb on - strand, within Pf6N2E2_1917 at 2271.157 kb on - strand, within Pf6N2E2_1917 at 2271.256 kb on + strand at 2271.257 kb on - strand at 2271.257 kb on - strand at 2271.272 kb on - strand at 2271.398 kb on + strand at 2271.425 kb on - strand at 2271.441 kb on - strand at 2271.571 kb on - strand at 2271.725 kb on - strand at 2271.725 kb on - strand at 2271.725 kb on - strand at 2271.727 kb on - strand at 2271.727 kb on - strand at 2271.737 kb on - strand at 2271.828 kb on - strand at 2271.828 kb on - strand at 2271.828 kb on - strand at 2271.828 kb on - strand at 2271.828 kb on - strand at 2271.828 kb on - strand at 2271.840 kb on + strand at 2271.841 kb on - strand at 2271.841 kb on - strand at 2271.846 kb on - strand at 2271.928 kb on + strand, within Pf6N2E2_1918 at 2271.968 kb on - strand, within Pf6N2E2_1918 at 2272.102 kb on + strand, within Pf6N2E2_1918 at 2272.102 kb on + strand, within Pf6N2E2_1918 at 2272.102 kb on + strand, within Pf6N2E2_1918 at 2272.103 kb on - strand, within Pf6N2E2_1918 at 2272.128 kb on - strand, within Pf6N2E2_1918 at 2272.216 kb on - strand, within Pf6N2E2_1918 at 2272.216 kb on - strand, within Pf6N2E2_1918 at 2272.216 kb on - strand, within Pf6N2E2_1918 at 2272.221 kb on + strand, within Pf6N2E2_1918 at 2272.222 kb on - strand, within Pf6N2E2_1918 at 2272.222 kb on - strand, within Pf6N2E2_1918 at 2272.222 kb on - strand, within Pf6N2E2_1918 at 2272.222 kb on - strand, within Pf6N2E2_1918 at 2272.231 kb on - strand, within Pf6N2E2_1918
Per-strain Table
Position Strand Gene LocusTag Fraction bismuth(III) chloride 0.000025 M remove 2,269,996 - +1.8 2,270,066 - -0.2 2,270,109 - -0.9 2,270,109 - +1.3 2,270,109 - -0.6 2,270,111 - +1.0 2,270,208 + -0.5 2,270,209 - +1.9 2,270,209 - -0.9 2,270,244 - +0.3 2,270,461 - +0.7 2,270,461 - +0.3 2,270,461 - +2.5 2,270,596 - +0.0 2,270,596 - -0.1 2,270,634 + +1.5 2,270,657 - +0.1 2,270,705 - -1.1 2,270,705 - +0.2 2,270,705 - -1.3 2,270,705 - +0.9 2,270,705 - +0.4 2,270,705 - +0.3 2,270,839 - Pf6N2E2_1916 0.53 +1.9 2,270,839 - Pf6N2E2_1916 0.53 -0.1 2,270,839 - Pf6N2E2_1916 0.53 +0.4 2,270,860 + Pf6N2E2_1916 0.60 +0.1 2,270,861 - Pf6N2E2_1916 0.61 +0.0 2,270,861 - Pf6N2E2_1916 0.61 +0.3 2,271,155 - Pf6N2E2_1917 0.69 -0.2 2,271,156 + Pf6N2E2_1917 0.70 -0.8 2,271,157 - Pf6N2E2_1917 0.70 -0.3 2,271,157 - Pf6N2E2_1917 0.70 -1.4 2,271,256 + -0.1 2,271,257 - -1.4 2,271,257 - +0.0 2,271,272 - +0.1 2,271,398 + -1.1 2,271,425 - +0.8 2,271,441 - +0.4 2,271,571 - +0.5 2,271,725 - +1.5 2,271,725 - -0.9 2,271,725 - -0.9 2,271,727 - -0.5 2,271,727 - -0.4 2,271,737 - -0.0 2,271,828 - -0.3 2,271,828 - +1.5 2,271,828 - +0.8 2,271,828 - +0.0 2,271,828 - +0.6 2,271,828 - -0.9 2,271,840 + +0.9 2,271,841 - +0.4 2,271,841 - -0.8 2,271,846 - -0.2 2,271,928 + Pf6N2E2_1918 0.16 +0.1 2,271,968 - Pf6N2E2_1918 0.20 +1.2 2,272,102 + Pf6N2E2_1918 0.31 +0.1 2,272,102 + Pf6N2E2_1918 0.31 +0.3 2,272,102 + Pf6N2E2_1918 0.31 -1.7 2,272,103 - Pf6N2E2_1918 0.31 -1.1 2,272,128 - Pf6N2E2_1918 0.33 +0.2 2,272,216 - Pf6N2E2_1918 0.41 -0.1 2,272,216 - Pf6N2E2_1918 0.41 -0.1 2,272,216 - Pf6N2E2_1918 0.41 +0.2 2,272,221 + Pf6N2E2_1918 0.41 -0.3 2,272,222 - Pf6N2E2_1918 0.42 -0.1 2,272,222 - Pf6N2E2_1918 0.42 -0.5 2,272,222 - Pf6N2E2_1918 0.42 -0.5 2,272,222 - Pf6N2E2_1918 0.42 +0.8 2,272,231 - Pf6N2E2_1918 0.42 +1.3
Or see this region's nucleotide sequence