Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06387 and H281DRAFT_06388 are separated by 163 nucleotides H281DRAFT_06388 and H281DRAFT_06389 are separated by 2 nucleotides H281DRAFT_06389 and H281DRAFT_06390 are separated by 92 nucleotides
H281DRAFT_06387: H281DRAFT_06387 - GntR family transcriptional regulator, at 59,423 to 60,166
_06387
H281DRAFT_06388: H281DRAFT_06388 - Sugar phosphate permease, at 60,330 to 61,643
_06388
H281DRAFT_06389: H281DRAFT_06389 - Predicted metal-dependent hydrolase, TIM-barrel fold, at 61,646 to 62,536
_06389
H281DRAFT_06390: H281DRAFT_06390 - tRNA_Val_GAC, at 62,629 to 62,705
_06390
Position (kb) 60
61
62 Strain fitness (log2 ratio) -2
-1
0
1 at 59.352 kb on - strand at 59.637 kb on + strand, within H281DRAFT_06387 at 59.791 kb on + strand, within H281DRAFT_06387 at 60.180 kb on + strand at 60.180 kb on + strand at 60.192 kb on + strand at 60.192 kb on + strand at 60.196 kb on + strand at 60.196 kb on + strand at 60.197 kb on - strand at 60.202 kb on - strand at 61.054 kb on - strand at 61.252 kb on - strand, within H281DRAFT_06388 at 61.252 kb on - strand, within H281DRAFT_06388 at 61.778 kb on + strand, within H281DRAFT_06389 at 61.778 kb on + strand, within H281DRAFT_06389 at 61.778 kb on + strand, within H281DRAFT_06389 at 61.779 kb on - strand at 61.831 kb on + strand, within H281DRAFT_06389 at 61.831 kb on + strand, within H281DRAFT_06389 at 61.872 kb on + strand, within H281DRAFT_06389 at 61.872 kb on + strand, within H281DRAFT_06389 at 61.873 kb on - strand, within H281DRAFT_06389 at 61.951 kb on + strand, within H281DRAFT_06389 at 61.952 kb on - strand, within H281DRAFT_06389 at 62.258 kb on - strand, within H281DRAFT_06389 at 62.360 kb on + strand, within H281DRAFT_06389 at 62.361 kb on - strand, within H281DRAFT_06389 at 62.361 kb on - strand, within H281DRAFT_06389 at 62.379 kb on - strand, within H281DRAFT_06389 at 62.466 kb on - strand at 62.563 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 59,352 - +0.6 59,637 + H281DRAFT_06387 0.29 -0.5 59,791 + H281DRAFT_06387 0.49 -0.5 60,180 + +0.8 60,180 + -1.1 60,192 + +0.0 60,192 + +0.2 60,196 + -0.1 60,196 + -1.7 60,197 - -2.4 60,202 - +0.3 61,054 - -0.7 61,252 - H281DRAFT_06388 0.70 +0.3 61,252 - H281DRAFT_06388 0.70 +0.8 61,778 + H281DRAFT_06389 0.15 -0.1 61,778 + H281DRAFT_06389 0.15 -0.3 61,778 + H281DRAFT_06389 0.15 -0.9 61,779 - +0.4 61,831 + H281DRAFT_06389 0.21 -1.0 61,831 + H281DRAFT_06389 0.21 +1.1 61,872 + H281DRAFT_06389 0.25 +0.9 61,872 + H281DRAFT_06389 0.25 +0.1 61,873 - H281DRAFT_06389 0.25 -0.6 61,951 + H281DRAFT_06389 0.34 +0.9 61,952 - H281DRAFT_06389 0.34 +0.7 62,258 - H281DRAFT_06389 0.69 -0.8 62,360 + H281DRAFT_06389 0.80 -1.3 62,361 - H281DRAFT_06389 0.80 +0.6 62,361 - H281DRAFT_06389 0.80 +0.1 62,379 - H281DRAFT_06389 0.82 +0.6 62,466 - +0.2 62,563 - +0.4
Or see this region's nucleotide sequence