Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03651 and H281DRAFT_03652 are separated by 112 nucleotides H281DRAFT_03652 and H281DRAFT_03653 are separated by 327 nucleotides H281DRAFT_03653 and H281DRAFT_03654 overlap by 4 nucleotides
H281DRAFT_03651: H281DRAFT_03651 - sarcosine oxidase, at 163,804 to 164,907
_03651
H281DRAFT_03652: H281DRAFT_03652 - Protein of unknown function (DUF3562), at 165,020 to 165,223
_03652
H281DRAFT_03653: H281DRAFT_03653 - cytochrome b561, at 165,551 to 166,150
_03653
H281DRAFT_03654: H281DRAFT_03654 - Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase, at 166,147 to 167,655
_03654
Position (kb) 165
166 Strain fitness (log2 ratio) -1
0
1
2 at 164.168 kb on + strand, within H281DRAFT_03651 at 164.541 kb on - strand, within H281DRAFT_03651 at 164.706 kb on + strand, within H281DRAFT_03651 at 164.707 kb on - strand, within H281DRAFT_03651 at 164.865 kb on + strand at 164.865 kb on + strand at 164.866 kb on - strand at 164.869 kb on + strand at 164.870 kb on - strand at 164.925 kb on + strand at 164.926 kb on - strand at 164.954 kb on + strand at 164.954 kb on + strand at 165.008 kb on - strand at 165.008 kb on - strand at 165.053 kb on - strand, within H281DRAFT_03652 at 165.087 kb on + strand, within H281DRAFT_03652 at 165.087 kb on + strand, within H281DRAFT_03652 at 165.088 kb on - strand, within H281DRAFT_03652 at 165.088 kb on - strand, within H281DRAFT_03652 at 165.339 kb on + strand at 165.340 kb on - strand at 165.364 kb on + strand at 165.364 kb on + strand at 165.382 kb on - strand at 165.510 kb on + strand at 165.511 kb on - strand at 165.550 kb on + strand at 165.550 kb on + strand at 165.550 kb on + strand at 165.550 kb on + strand at 165.550 kb on + strand at 165.550 kb on + strand at 165.550 kb on + strand at 165.550 kb on + strand at 165.551 kb on - strand at 165.551 kb on - strand at 165.551 kb on - strand at 165.557 kb on - strand at 165.609 kb on - strand at 165.609 kb on - strand at 165.656 kb on - strand, within H281DRAFT_03653 at 165.759 kb on + strand, within H281DRAFT_03653 at 165.867 kb on - strand, within H281DRAFT_03653 at 165.867 kb on - strand, within H281DRAFT_03653 at 165.973 kb on + strand, within H281DRAFT_03653 at 166.042 kb on + strand, within H281DRAFT_03653 at 166.042 kb on + strand, within H281DRAFT_03653 at 166.042 kb on + strand, within H281DRAFT_03653 at 166.042 kb on + strand, within H281DRAFT_03653 at 166.042 kb on + strand, within H281DRAFT_03653 at 166.043 kb on - strand, within H281DRAFT_03653 at 166.043 kb on - strand, within H281DRAFT_03653 at 166.064 kb on + strand, within H281DRAFT_03653 at 166.197 kb on - strand at 166.200 kb on + strand at 166.200 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 164,168 + H281DRAFT_03651 0.33 -0.4 164,541 - H281DRAFT_03651 0.67 +2.1 164,706 + H281DRAFT_03651 0.82 +0.3 164,707 - H281DRAFT_03651 0.82 -0.0 164,865 + +0.1 164,865 + -0.8 164,866 - +0.4 164,869 + +0.8 164,870 - -0.1 164,925 + +0.0 164,926 - -0.3 164,954 + -0.0 164,954 + +0.3 165,008 - -0.1 165,008 - -0.3 165,053 - H281DRAFT_03652 0.16 +0.4 165,087 + H281DRAFT_03652 0.33 +1.6 165,087 + H281DRAFT_03652 0.33 -0.3 165,088 - H281DRAFT_03652 0.33 -0.2 165,088 - H281DRAFT_03652 0.33 +0.8 165,339 + -1.0 165,340 - +1.4 165,364 + -0.1 165,364 + -0.9 165,382 - +1.5 165,510 + -0.5 165,511 - -0.0 165,550 + -0.3 165,550 + +0.6 165,550 + +1.2 165,550 + +0.2 165,550 + -0.7 165,550 + -1.0 165,550 + +0.5 165,550 + +1.2 165,551 - +0.8 165,551 - +0.3 165,551 - +0.0 165,557 - -0.7 165,609 - -0.4 165,609 - -0.3 165,656 - H281DRAFT_03653 0.17 -0.3 165,759 + H281DRAFT_03653 0.35 -0.7 165,867 - H281DRAFT_03653 0.53 +0.1 165,867 - H281DRAFT_03653 0.53 -0.3 165,973 + H281DRAFT_03653 0.70 -1.6 166,042 + H281DRAFT_03653 0.82 -0.9 166,042 + H281DRAFT_03653 0.82 +0.3 166,042 + H281DRAFT_03653 0.82 +0.2 166,042 + H281DRAFT_03653 0.82 +1.1 166,042 + H281DRAFT_03653 0.82 +1.1 166,043 - H281DRAFT_03653 0.82 -1.4 166,043 - H281DRAFT_03653 0.82 -0.2 166,064 + H281DRAFT_03653 0.85 -0.4 166,197 - -0.6 166,200 + -0.4 166,200 + +0.1
Or see this region's nucleotide sequence