Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03075 and H281DRAFT_03076 are separated by 85 nucleotides H281DRAFT_03076 and H281DRAFT_03077 are separated by 84 nucleotides H281DRAFT_03077 and H281DRAFT_03078 overlap by 4 nucleotides
H281DRAFT_03075: H281DRAFT_03075 - taurine dioxygenase, at 104,821 to 105,798
_03075
H281DRAFT_03076: H281DRAFT_03076 - NitT/TauT family transport system substrate-binding protein, at 105,884 to 106,936
_03076
H281DRAFT_03077: H281DRAFT_03077 - NitT/TauT family transport system ATP-binding protein, at 107,021 to 107,860
_03077
H281DRAFT_03078: H281DRAFT_03078 - NitT/TauT family transport system permease protein, at 107,857 to 108,735
_03078
Position (kb) 105
106
107 Strain fitness (log2 ratio) -1
0
1 at 105.271 kb on + strand, within H281DRAFT_03075 at 105.272 kb on - strand, within H281DRAFT_03075 at 105.274 kb on - strand, within H281DRAFT_03075 at 105.424 kb on + strand, within H281DRAFT_03075 at 105.620 kb on + strand, within H281DRAFT_03075 at 105.643 kb on - strand, within H281DRAFT_03075 at 105.643 kb on - strand, within H281DRAFT_03075 at 106.043 kb on + strand, within H281DRAFT_03076 at 106.281 kb on - strand, within H281DRAFT_03076 at 106.284 kb on - strand, within H281DRAFT_03076 at 106.568 kb on - strand, within H281DRAFT_03076 at 107.819 kb on - strand at 107.819 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 105,271 + H281DRAFT_03075 0.46 -0.3 105,272 - H281DRAFT_03075 0.46 +0.6 105,274 - H281DRAFT_03075 0.46 +0.2 105,424 + H281DRAFT_03075 0.62 -0.9 105,620 + H281DRAFT_03075 0.82 +0.0 105,643 - H281DRAFT_03075 0.84 +0.4 105,643 - H281DRAFT_03075 0.84 -0.1 106,043 + H281DRAFT_03076 0.15 +0.2 106,281 - H281DRAFT_03076 0.38 +1.6 106,284 - H281DRAFT_03076 0.38 +0.2 106,568 - H281DRAFT_03076 0.65 -0.2 107,819 - -0.2 107,819 - -0.2
Or see this region's nucleotide sequence