Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01733 and H281DRAFT_01734 are separated by 19 nucleotides H281DRAFT_01734 and H281DRAFT_01735 overlap by 20 nucleotides
H281DRAFT_01733: H281DRAFT_01733 - RND family efflux transporter, MFP subunit, at 623,866 to 625,107
_01733
H281DRAFT_01734: H281DRAFT_01734 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 625,127 to 626,623
_01734
H281DRAFT_01735: H281DRAFT_01735 - two-component system, OmpR family, heavy metal sensor histidine kinase CusS, at 626,604 to 628,028
_01735
Position (kb) 625
626
627 Strain fitness (log2 ratio) -2
-1
0
1
2 at 624.160 kb on + strand, within H281DRAFT_01733 at 624.833 kb on - strand, within H281DRAFT_01733 at 624.991 kb on + strand at 624.991 kb on + strand at 624.992 kb on - strand at 625.214 kb on + strand at 625.214 kb on + strand at 625.431 kb on - strand, within H281DRAFT_01734 at 625.607 kb on + strand, within H281DRAFT_01734 at 625.698 kb on + strand, within H281DRAFT_01734 at 625.748 kb on + strand, within H281DRAFT_01734 at 625.869 kb on + strand, within H281DRAFT_01734 at 625.869 kb on + strand, within H281DRAFT_01734 at 626.078 kb on + strand, within H281DRAFT_01734 at 626.079 kb on - strand, within H281DRAFT_01734 at 626.841 kb on - strand, within H281DRAFT_01735 at 626.925 kb on - strand, within H281DRAFT_01735 at 627.176 kb on - strand, within H281DRAFT_01735 at 627.272 kb on - strand, within H281DRAFT_01735 at 627.549 kb on - strand, within H281DRAFT_01735
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 624,160 + H281DRAFT_01733 0.24 +1.2 624,833 - H281DRAFT_01733 0.78 -2.1 624,991 + +0.4 624,991 + -0.5 624,992 - -0.5 625,214 + -2.0 625,214 + +0.6 625,431 - H281DRAFT_01734 0.20 +0.4 625,607 + H281DRAFT_01734 0.32 +0.2 625,698 + H281DRAFT_01734 0.38 +0.4 625,748 + H281DRAFT_01734 0.41 +2.0 625,869 + H281DRAFT_01734 0.50 +0.1 625,869 + H281DRAFT_01734 0.50 +1.0 626,078 + H281DRAFT_01734 0.64 +0.7 626,079 - H281DRAFT_01734 0.64 +0.2 626,841 - H281DRAFT_01735 0.17 -0.0 626,925 - H281DRAFT_01735 0.23 -1.8 627,176 - H281DRAFT_01735 0.40 +1.8 627,272 - H281DRAFT_01735 0.47 -1.2 627,549 - H281DRAFT_01735 0.66 -0.9
Or see this region's nucleotide sequence