Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01288 and H281DRAFT_01289 overlap by 4 nucleotides H281DRAFT_01289 and H281DRAFT_01290 overlap by 4 nucleotides H281DRAFT_01290 and H281DRAFT_01291 are separated by 108 nucleotides
H281DRAFT_01288: H281DRAFT_01288 - mxaC protein, at 126,063 to 127,052
_01288
H281DRAFT_01289: H281DRAFT_01289 - mxaA protein, at 127,049 to 127,984
_01289
H281DRAFT_01290: H281DRAFT_01290 - Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain), at 127,981 to 128,835
_01290
H281DRAFT_01291: H281DRAFT_01291 - MoxR-like ATPase, at 128,944 to 129,963
_01291
Position (kb) 127
128
129 Strain fitness (log2 ratio) -1
0
1 at 127.785 kb on + strand, within H281DRAFT_01289 at 128.043 kb on - strand at 128.246 kb on + strand, within H281DRAFT_01290 at 128.246 kb on + strand, within H281DRAFT_01290 at 129.249 kb on - strand, within H281DRAFT_01291 at 129.368 kb on + strand, within H281DRAFT_01291 at 129.672 kb on + strand, within H281DRAFT_01291 at 129.698 kb on + strand, within H281DRAFT_01291 at 129.698 kb on + strand, within H281DRAFT_01291 at 129.699 kb on - strand, within H281DRAFT_01291 at 129.766 kb on + strand, within H281DRAFT_01291
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 127,785 + H281DRAFT_01289 0.79 +0.6 128,043 - +0.6 128,246 + H281DRAFT_01290 0.31 +0.3 128,246 + H281DRAFT_01290 0.31 +0.9 129,249 - H281DRAFT_01291 0.30 -0.2 129,368 + H281DRAFT_01291 0.42 +0.0 129,672 + H281DRAFT_01291 0.71 +0.3 129,698 + H281DRAFT_01291 0.74 -0.0 129,698 + H281DRAFT_01291 0.74 +0.5 129,699 - H281DRAFT_01291 0.74 +0.1 129,766 + H281DRAFT_01291 0.81 +0.0
Or see this region's nucleotide sequence