Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01229 and H281DRAFT_01230 are separated by 113 nucleotides H281DRAFT_01230 and H281DRAFT_01231 are separated by 260 nucleotides H281DRAFT_01231 and H281DRAFT_01232 are separated by 170 nucleotides
H281DRAFT_01229: H281DRAFT_01229 - Sugar phosphate permease, at 67,127 to 68,452
_01229
H281DRAFT_01230: H281DRAFT_01230 - 3-oxoacyl-[acyl-carrier protein] reductase, at 68,566 to 69,318
_01230
H281DRAFT_01231: H281DRAFT_01231 - hypothetical protein, at 69,579 to 69,923
_01231
H281DRAFT_01232: H281DRAFT_01232 - Predicted arabinose efflux permease, MFS family, at 70,094 to 71,356
_01232
Position (kb)
68
69
70 Strain fitness (log2 ratio)
-2
-1
0
1 at 67.695 kb on + strand, within H281DRAFT_01229 at 68.571 kb on - strand at 68.705 kb on + strand, within H281DRAFT_01230 at 68.705 kb on + strand, within H281DRAFT_01230 at 68.818 kb on + strand, within H281DRAFT_01230 at 68.975 kb on - strand, within H281DRAFT_01230 at 69.362 kb on - strand at 69.395 kb on + strand at 69.397 kb on + strand at 69.397 kb on + strand at 69.398 kb on - strand at 69.666 kb on + strand, within H281DRAFT_01231 at 69.841 kb on + strand, within H281DRAFT_01231 at 69.842 kb on - strand, within H281DRAFT_01231 at 69.968 kb on - strand at 70.013 kb on + strand at 70.015 kb on + strand at 70.019 kb on + strand at 70.096 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 67,695 + H281DRAFT_01229 0.43 -0.2 68,571 - -1.2 68,705 + H281DRAFT_01230 0.18 -0.7 68,705 + H281DRAFT_01230 0.18 -0.8 68,818 + H281DRAFT_01230 0.33 -0.5 68,975 - H281DRAFT_01230 0.54 -0.1 69,362 - +0.7 69,395 + +0.6 69,397 + +0.4 69,397 + -0.3 69,398 - -0.5 69,666 + H281DRAFT_01231 0.25 +0.0 69,841 + H281DRAFT_01231 0.76 +0.2 69,842 - H281DRAFT_01231 0.76 -0.8 69,968 - +1.3 70,013 + +0.5 70,015 + +0.4 70,019 + -1.8 70,096 - +0.5
Or see this region's nucleotide sequence