Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02681

Experiment: PYE_noCalcium 4C survival rep1 58 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 4C survival rep1 58 days
2,832,779	-				+0.2
2,832,809	+				-1.9
2,832,817	-				+0.3
2,832,817	-				+2.2
2,832,817	-				-0.8
2,832,817	-				+0.3
2,832,817	-				-1.7
2,832,817	-				-1.6
2,832,817	-				-0.3
2,832,817	-				-0.6
2,832,840	+		CCNA_02680	0.10	+0.4
2,832,851	+		CCNA_02680	0.12	+1.0
2,832,867	+		CCNA_02680	0.13	-1.0
2,832,871	+		CCNA_02680	0.14	-2.3
2,832,871	+		CCNA_02680	0.14	-1.9
2,832,879	-		CCNA_02680	0.15	-0.6
2,832,879	-		CCNA_02680	0.15	-0.8
2,832,879	-		CCNA_02680	0.15	-0.8
2,832,897	+		CCNA_02680	0.17	+0.4
2,832,905	-		CCNA_02680	0.17	+1.8
2,832,905	-		CCNA_02680	0.17	-1.1
2,832,971	-		CCNA_02680	0.24	-1.9
2,833,036	+		CCNA_02680	0.31	-1.6
2,833,036	+		CCNA_02680	0.31	-0.0
2,833,036	+		CCNA_02680	0.31	-2.1
2,833,044	-		CCNA_02680	0.32	-1.2
2,833,044	-		CCNA_02680	0.32	-1.3
2,833,044	-		CCNA_02680	0.32	-1.0
2,833,044	-		CCNA_02680	0.32	-0.4
2,833,051	-		CCNA_02680	0.33	+1.3
2,833,051	-		CCNA_02680	0.33	-0.1
2,833,086	+		CCNA_02680	0.37	+0.5
2,833,093	+		CCNA_02680	0.37	-1.0
2,833,101	-		CCNA_02680	0.38	-0.2
2,833,101	-		CCNA_02680	0.38	-2.2
2,833,106	+		CCNA_02680	0.39	+2.0
2,833,106	+		CCNA_02680	0.39	+1.0
2,833,120	-		CCNA_02680	0.40	-1.8
2,833,122	+		CCNA_02680	0.40	-0.8
2,833,127	+		CCNA_02680	0.41	-2.6
2,833,130	-		CCNA_02680	0.41	+0.6
2,833,132	+		CCNA_02680	0.42	+2.0
2,833,140	-		CCNA_02680	0.42	+0.7
2,833,145	-		CCNA_02680	0.43	-1.3
2,833,162	+		CCNA_02680	0.45	-0.5
2,833,162	+		CCNA_02680	0.45	-0.6
2,833,162	+		CCNA_02680	0.45	+2.0
2,833,162	+		CCNA_02680	0.45	-1.8
2,833,162	+		CCNA_02680	0.45	-1.2
2,833,162	+		CCNA_02680	0.45	-2.1
2,833,162	+		CCNA_02680	0.45	-1.7
2,833,162	+		CCNA_02680	0.45	-1.5
2,833,170	-		CCNA_02680	0.46	-1.0
2,833,170	-		CCNA_02680	0.46	-0.8
2,833,170	-		CCNA_02680	0.46	-1.2
2,833,170	-		CCNA_02680	0.46	-0.2
2,833,170	-		CCNA_02680	0.46	+1.0
2,833,170	-		CCNA_02680	0.46	-1.1
2,833,232	+		CCNA_02680	0.52	-0.6
2,833,267	+		CCNA_02680	0.56	-0.5
2,833,275	-		CCNA_02680	0.57	-1.2
2,833,286	+		CCNA_02680	0.58	+1.0
2,833,286	+		CCNA_02680	0.58	-1.9
2,833,291	+		CCNA_02680	0.58	-0.0
2,833,294	-		CCNA_02680	0.59	-2.2
2,833,294	-		CCNA_02680	0.59	-2.6
2,833,297	-		CCNA_02680	0.59	+1.0
2,833,308	-		CCNA_02680	0.60	-0.8
2,833,357	+		CCNA_02680	0.65	-0.5
2,833,357	+		CCNA_02680	0.65	-3.4
2,833,365	-		CCNA_02680	0.66	-1.0
2,833,365	-		CCNA_02680	0.66	-3.3
2,833,365	-		CCNA_02680	0.66	-3.0
2,833,398	+		CCNA_02680	0.70	-1.0
2,833,406	-		CCNA_02680	0.71	+0.6
2,833,406	-		CCNA_02680	0.71	+0.5
2,833,476	+		CCNA_02680	0.78	-2.7
2,833,484	-		CCNA_02680	0.79	-0.8
2,833,489	-		CCNA_02680	0.80	-1.0
2,833,497	+		CCNA_02680	0.80	-1.8
2,833,505	+		CCNA_02680	0.81	-0.5
2,833,563	-		CCNA_02680	0.87	-1.6
2,833,594	-				-1.9
2,833,594	-				+1.5
2,833,594	-				-1.5
2,833,594	-				-1.2
2,833,598	+				-2.3
2,833,611	-				-1.4
2,833,717	+				-1.6
2,833,720	-				-0.3
2,833,725	-				-0.7
2,833,725	-				+0.4
2,833,725	-				+0.1
2,833,725	-				-0.5
2,833,730	+				+1.0
2,833,762	+				+2.0
2,833,772	-				+0.2
2,833,788	+				+2.3
2,833,806	+				-1.3
2,833,814	-				-1.0
2,833,814	-				-2.2
2,833,814	-				+1.0
2,833,857	+				-0.2
2,833,857	+				+1.0
2,833,865	-				+2.0
2,833,865	-				-0.8
2,833,900	-				-0.2
2,833,917	+				-1.2
2,833,917	+				-1.9
2,833,925	-		CCNA_02681	0.10	+2.0
2,833,963	+		CCNA_02681	0.13	+0.3
2,833,994	+		CCNA_02681	0.15	-1.9
2,833,994	+				+0.1
2,833,994	+		CCNA_02681	0.15	-0.2
2,833,994	+		CCNA_02681	0.15	-1.0
2,834,002	-		CCNA_02681	0.16	-2.0
2,834,002	-		CCNA_02681	0.16	-0.8
2,834,007	+		CCNA_02681	0.16	-1.9
2,834,054	-		CCNA_02681	0.19	+1.0
2,834,066	+		CCNA_02681	0.20	-1.3
2,834,066	+		CCNA_02681	0.20	-1.9
2,834,069	-		CCNA_02681	0.20	-2.6
2,834,161	-		CCNA_02681	0.27	-1.7
2,834,161	-		CCNA_02681	0.27	-1.9
2,834,161	-		CCNA_02681	0.27	+2.3
2,834,161	-		CCNA_02681	0.27	-1.7
2,834,161	-		CCNA_02681	0.27	-1.9
2,834,181	+		CCNA_02681	0.28	-0.9
2,834,207	+		CCNA_02681	0.30	-0.5
2,834,257	+		CCNA_02681	0.34	-3.2
2,834,261	+		CCNA_02681	0.34	+0.4
2,834,271	+		CCNA_02681	0.35	-0.6
2,834,271	+		CCNA_02681	0.35	-1.1
2,834,271	+		CCNA_02681	0.35	+0.8
2,834,354	-		CCNA_02681	0.40	+1.4
2,834,412	+		CCNA_02681	0.44	-0.6
2,834,420	-		CCNA_02681	0.45	-0.8
2,834,439	-		CCNA_02681	0.46	-0.4
2,834,444	-		CCNA_02681	0.47	-0.0
2,834,565	-		CCNA_02681	0.55	+0.4
2,834,579	+		CCNA_02681	0.56	-1.3
2,834,592	+		CCNA_02681	0.57	+0.2
2,834,595	-		CCNA_02681	0.57	-0.4
2,834,600	-		CCNA_02681	0.58	+0.4
2,834,618	+		CCNA_02681	0.59	-1.8
2,834,618	+		CCNA_02681	0.59	-2.7
2,834,618	+		CCNA_02681	0.59	-1.7
2,834,626	-		CCNA_02681	0.59	-2.2
2,834,626	-		CCNA_02681	0.59	-1.5
2,834,632	-		CCNA_02681	0.60	+2.0
2,834,632	-		CCNA_02681	0.60	-1.6
2,834,646	+		CCNA_02681	0.61	-2.0
2,834,666	-		CCNA_02681	0.62	-1.9
2,834,666	-		CCNA_02681	0.62	-0.8
2,834,678	-		CCNA_02681	0.63	-0.4
2,834,776	-		CCNA_02681	0.70	-1.8
2,834,783	+		CCNA_02681	0.70	-1.9
2,834,844	-		CCNA_02681	0.75	+0.8
2,834,852	+		CCNA_02681	0.75	-0.2
2,834,901	+		CCNA_02681	0.79	-0.5
2,834,909	-		CCNA_02681	0.79	-1.7
2,834,962	-		CCNA_02681	0.83	-2.9
2,834,987	-		CCNA_02681	0.85	-2.6
2,835,002	+		CCNA_02681	0.86	-1.1
2,835,059	+		CCNA_02681	0.90	-0.8
2,835,197	+				+1.2
2,835,198	+				+1.0
2,835,248	+				+0.4
2,835,248	+				-0.0
2,835,250	-				+1.0
2,835,256	-				-1.1
2,835,268	+				-0.2
2,835,275	+				-0.9
2,835,287	+				-0.2
2,835,346	-		CCNA_02682	0.17	-1.0
2,835,353	+		CCNA_02682	0.18	-0.1
2,835,353	+		CCNA_02682	0.18	-1.0
2,835,353	+		CCNA_02682	0.18	-1.6
2,835,353	+		CCNA_02682	0.18	-0.4
2,835,353	+		CCNA_02682	0.18	+1.1
2,835,354	+		CCNA_02682	0.18	+2.1
2,835,361	-		CCNA_02682	0.19	-0.0
2,835,361	-		CCNA_02682	0.19	-1.5
2,835,361	-		CCNA_02682	0.19	-1.9
2,835,372	+		CCNA_02682	0.20	+0.6
2,835,372	+		CCNA_02682	0.20	+2.0
2,835,386	-		CCNA_02682	0.22	-0.6
2,835,419	-		CCNA_02682	0.26	-0.8
2,835,441	+		CCNA_02682	0.29	-1.5
2,835,476	-		CCNA_02682	0.34	+1.7
2,835,576	+		CCNA_02682	0.47	-0.6
2,835,583	+		CCNA_02682	0.48	-3.1
2,835,594	+		CCNA_02682	0.49	+3.0
2,835,610	-		CCNA_02682	0.51	-1.5
2,835,615	+		CCNA_02682	0.52	+0.3
2,835,623	+		CCNA_02682	0.53	+1.5
2,835,698	+		CCNA_02682	0.63	+0.1
2,835,715	+		CCNA_02682	0.65	+0.5
2,835,735	-		CCNA_02682	0.67	+2.0
2,835,738	+		CCNA_02682	0.68	+2.0
2,835,746	-		CCNA_02682	0.69	-1.0
2,835,746	-		CCNA_02682	0.69	-0.7
2,835,764	+		CCNA_02682	0.71	+0.6
2,835,790	-		CCNA_02682	0.74	-2.4
2,835,792	+		CCNA_02682	0.75	+1.0
2,835,818	-		CCNA_02682	0.78	-0.3
2,835,818	-		CCNA_02682	0.78	-1.9
2,835,826	+		CCNA_02682	0.79	-1.7
2,835,887	-		CCNA_02682	0.87	-2.8
2,835,893	-		CCNA_02682	0.88	-1.7
2,835,905	-		CCNA_02682	0.89	-2.5
2,835,906	-		CCNA_02682	0.89	-0.7
2,835,921	-				-1.8
2,835,943	+				-0.4
2,836,004	-				-0.2
2,836,011	+				-0.9
2,836,022	+				-0.0
2,836,030	-				+0.2
2,836,053	-				-0.1
2,836,080	+				+1.3
2,836,083	-				-2.9
2,836,103	-				-1.9
2,836,118	+		CCNA_02683	0.10	-1.8
2,836,178	-		CCNA_02683	0.15	-3.7
2,836,178	-		CCNA_02683	0.15	+1.0