Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02505

Experiment: PYE_noCalcium 4C survival rep1 58 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 4C survival rep1 58 days
2,653,806	-		CCNA_02504	0.18	-1.8
2,653,820	-		CCNA_02504	0.19	+2.0
2,653,888	+		CCNA_02504	0.25	-0.6
2,653,888	+		CCNA_02504	0.25	-0.1
2,653,900	+		CCNA_02504	0.26	-0.3
2,653,901	-		CCNA_02504	0.26	-3.0
2,653,901	-		CCNA_02504	0.26	-0.6
2,653,906	-		CCNA_02504	0.27	+1.1
2,653,928	-		CCNA_02504	0.29	+1.5
2,653,928	-		CCNA_02504	0.29	-1.0
2,653,928	-		CCNA_02504	0.29	-1.0
2,653,929	-		CCNA_02504	0.29	-2.2
2,653,946	-		CCNA_02504	0.30	+1.2
2,653,946	-		CCNA_02504	0.30	-1.3
2,653,963	-		CCNA_02504	0.32	-1.9
2,654,007	+		CCNA_02504	0.36	+2.5
2,654,016	+		CCNA_02504	0.36	+0.6
2,654,024	-		CCNA_02504	0.37	-0.4
2,654,033	-		CCNA_02504	0.38	+0.3
2,654,048	+		CCNA_02504	0.39	-1.5
2,654,059	+		CCNA_02504	0.40	+3.6
2,654,067	-		CCNA_02504	0.41	-0.4
2,654,116	-		CCNA_02504	0.45	-0.7
2,654,133	-		CCNA_02504	0.47	-0.1
2,654,179	+		CCNA_02504	0.51	+0.2
2,654,188	-		CCNA_02504	0.51	-2.0
2,654,197	+		CCNA_02504	0.52	-1.2
2,654,248	+		CCNA_02504	0.57	+0.4
2,654,250	+		CCNA_02504	0.57	-3.0
2,654,256	-		CCNA_02504	0.57	-0.7
2,654,256	-		CCNA_02504	0.57	-1.4
2,654,276	+		CCNA_02504	0.59	+0.6
2,654,291	+		CCNA_02504	0.60	-1.8
2,654,299	-		CCNA_02504	0.61	-2.4
2,654,305	+		CCNA_02504	0.61	-2.4
2,654,309	+		CCNA_02504	0.62	-0.8
2,654,310	+		CCNA_02504	0.62	+1.4
2,654,324	+		CCNA_02504	0.63	+0.1
2,654,324	+		CCNA_02504	0.63	-1.5
2,654,327	-		CCNA_02504	0.63	+0.5
2,654,332	-		CCNA_02504	0.64	-1.0
2,654,332	-		CCNA_02504	0.64	-0.2
2,654,332	-		CCNA_02504	0.64	-0.6
2,654,332	-		CCNA_02504	0.64	-0.6
2,654,332	-		CCNA_02504	0.64	-0.3
2,654,343	+		CCNA_02504	0.65	-2.3
2,654,343	+		CCNA_02504	0.65	+0.6
2,654,343	+		CCNA_02504	0.65	-2.1
2,654,351	-		CCNA_02504	0.65	-0.9
2,654,351	-		CCNA_02504	0.65	-0.3
2,654,351	-		CCNA_02504	0.65	+1.4
2,654,351	-		CCNA_02504	0.65	-1.6
2,654,365	+		CCNA_02504	0.67	-2.6
2,654,373	-		CCNA_02504	0.67	-2.5
2,654,384	-		CCNA_02504	0.68	+0.2
2,654,407	+		CCNA_02504	0.70	-1.5
2,654,415	-		CCNA_02504	0.71	-0.1
2,654,415	-		CCNA_02504	0.71	-1.0
2,654,478	+		CCNA_02504	0.76	-0.5
2,654,486	-		CCNA_02504	0.77	+0.4
2,654,486	-		CCNA_02504	0.77	+0.3
2,654,509	-		CCNA_02504	0.79	+2.0
2,654,509	-		CCNA_02504	0.79	+1.0
2,654,537	-		CCNA_02504	0.82	+2.4
2,654,539	+		CCNA_02504	0.82	-2.1
2,654,539	+		CCNA_02504	0.82	-0.0
2,654,541	+		CCNA_02504	0.82	+0.8
2,654,547	-		CCNA_02504	0.82	-1.6
2,654,549	-		CCNA_02504	0.83	+0.2
2,654,549	-		CCNA_02504	0.83	-1.8
2,654,574	+		CCNA_02504	0.85	-2.8
2,654,600	+		CCNA_02504	0.87	+1.4
2,654,632	+		CCNA_02504	0.90	+0.4
2,654,632	+		CCNA_02504	0.90	-1.2
2,654,638	-				+1.2
2,654,640	+				+0.2
2,654,673	+				+0.0
2,654,673	+				+1.0
2,654,673	+				-0.2
2,654,673	+				+0.3
2,654,731	+				+0.0
2,654,739	+				-1.2
2,654,749	+				-0.6
2,654,749	+				+2.5
2,654,755	-				+0.7
2,654,755	-				+2.3
2,654,764	-				+1.0
2,654,764	-				-0.1
2,654,789	+				-0.1
2,654,797	-				-0.5
2,654,811	-				+0.4
2,654,819	+				+1.0
2,654,819	+				-1.5
2,654,819	+				-0.0
2,654,819	+				-1.0
2,654,827	-				-0.3
2,654,864	+		CCNA_02505	0.12	-1.3
2,654,948	+		CCNA_02505	0.21	+0.7
2,654,970	+		CCNA_02505	0.23	-1.4
2,654,970	+		CCNA_02505	0.23	-1.6
2,654,975	+		CCNA_02505	0.24	+1.2
2,654,975	+		CCNA_02505	0.24	-0.0
2,654,983	-		CCNA_02505	0.25	+0.3
2,654,983	-		CCNA_02505	0.25	-1.4
2,655,009	-		CCNA_02505	0.27	-2.0
2,655,014	-		CCNA_02505	0.28	-1.3
2,655,084	-		CCNA_02505	0.35	-1.8
2,655,131	-		CCNA_02505	0.40	+0.5
2,655,131	-		CCNA_02505	0.40	+1.0
2,655,131	-		CCNA_02505	0.40	+0.4
2,655,163	-		CCNA_02505	0.43	-0.8
2,655,183	+		CCNA_02505	0.45	+1.0
2,655,274	-		CCNA_02505	0.55	-0.2
2,655,278	+		CCNA_02505	0.55	-0.0
2,655,278	+		CCNA_02505	0.55	-2.7
2,655,278	+		CCNA_02505	0.55	-0.3
2,655,278	+		CCNA_02505	0.55	+0.4
2,655,278	+		CCNA_02505	0.55	-2.3
2,655,286	-		CCNA_02505	0.56	-0.3
2,655,286	-		CCNA_02505	0.56	-2.3
2,655,286	-		CCNA_02505	0.56	-0.1
2,655,286	-		CCNA_02505	0.56	-0.7
2,655,286	-		CCNA_02505	0.56	-1.2
2,655,286	-		CCNA_02505	0.56	-1.3
2,655,342	+		CCNA_02505	0.62	-1.0
2,655,393	+		CCNA_02505	0.67	+0.4
2,655,398	+		CCNA_02505	0.67	-2.5
2,655,406	-		CCNA_02505	0.68	-1.5
2,655,424	-		CCNA_02505	0.70	+1.0
2,655,447	-		CCNA_02505	0.72	-3.3
2,655,480	-		CCNA_02505	0.76	+0.5
2,655,482	-		CCNA_02505	0.76	-1.6
2,655,482	-		CCNA_02505	0.76	+0.2
2,655,508	-		CCNA_02505	0.79	-0.8
2,655,523	-		CCNA_02505	0.80	-0.5
2,655,537	-		CCNA_02505	0.82	-0.0
2,655,559	+		CCNA_02505	0.84	+0.1
2,655,563	+		CCNA_02505	0.84	-1.9
2,655,585	-		CCNA_02505	0.87	+1.0
2,655,593	-		CCNA_02505	0.88	+0.1
2,655,603	-		CCNA_02505	0.89	+2.0
2,655,608	-		CCNA_02505	0.89	-0.0
2,655,613	-		CCNA_02505	0.90	-1.3
2,655,618	+				-0.6
2,655,618	+				-2.1
2,655,628	+				-0.2
2,655,654	+				-2.7
2,655,715	-				-2.3
2,655,795	-				-1.2
2,655,798	+				-0.2
2,655,798	+				-0.3
2,655,806	-				-1.0
2,655,807	-				+0.7
2,655,835	+				-0.3
2,655,835	+				-2.8
2,655,835	+				-1.1
2,655,835	+				-2.0
2,655,842	-				+1.1
2,655,843	-				+1.1
2,655,863	+				-1.2
2,655,871	-				+0.5
2,655,886	+				-0.2
2,655,886	+				-1.0
2,655,910	+				-1.3
2,655,941	-				-2.0
2,655,981	+				-2.0
2,655,989	-				-0.1
2,655,989	-				-0.8
2,655,990	-				-0.5
2,656,031	-				+0.6
2,656,031	-				+0.4
2,656,038	+				+2.0
2,656,040	+				-0.1
2,656,040	+				-0.6
2,656,046	-				-0.8
2,656,058	+				-1.3
2,656,067	-				-1.5
2,656,076	+				-2.5
2,656,093	-		CCNA_02506	0.13	+1.2
2,656,113	+		CCNA_02506	0.28	-2.2
2,656,113	-		CCNA_02506	0.28	-0.0
2,656,145	+		CCNA_02506	0.50	-0.3
2,656,145	+		CCNA_02506	0.50	+1.0
2,656,145	+		CCNA_02506	0.50	+0.6
2,656,153	-		CCNA_02506	0.56	-1.0
2,656,193	-		CCNA_02506	0.84	-1.5
2,656,217	+				-1.5
2,656,259	-				+0.4
2,656,313	-				-0.6
2,656,371	+				+0.7
2,656,379	-				+0.1
2,656,379	-				-0.1
2,656,379	-				-1.4
2,656,653	+				-0.8
2,656,655	+				-0.9
2,656,663	+				-0.8
2,656,666	-				+0.1
2,656,669	+				+1.0
2,656,671	-				-1.0
2,656,677	-				+2.0
2,656,684	-				+0.3
2,656,691	-				-0.1