Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02459

Experiment: PYE_noCalcium 4C survival rep1 58 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 4C survival rep1 58 days
2,600,069	+		CCNA_02458	0.32	+1.4
2,600,069	+		CCNA_02458	0.32	-2.5
2,600,069	+		CCNA_02458	0.32	-1.4
2,600,069	+		CCNA_02458	0.32	-1.6
2,600,069	+		CCNA_02458	0.32	-1.5
2,600,077	-		CCNA_02458	0.32	-1.4
2,600,077	-		CCNA_02458	0.32	+0.4
2,600,077	-		CCNA_02458	0.32	-2.3
2,600,137	+		CCNA_02458	0.36	-0.9
2,600,137	+		CCNA_02458	0.36	-1.4
2,600,154	+		CCNA_02458	0.37	-1.4
2,600,166	+		CCNA_02458	0.38	-3.5
2,600,168	+		CCNA_02458	0.38	+1.9
2,600,195	+		CCNA_02458	0.40	-0.1
2,600,195	+		CCNA_02458	0.40	-0.3
2,600,205	+		CCNA_02458	0.41	-2.7
2,600,215	+		CCNA_02458	0.42	-1.4
2,600,228	-		CCNA_02458	0.42	-1.2
2,600,229	-		CCNA_02458	0.43	-0.1
2,600,272	-		CCNA_02458	0.46	+1.9
2,600,301	+		CCNA_02458	0.48	-1.3
2,600,301	+		CCNA_02458	0.48	-2.5
2,600,301	+		CCNA_02458	0.48	-2.7
2,600,306	+		CCNA_02458	0.48	-0.4
2,600,309	-		CCNA_02458	0.48	+1.9
2,600,312	+		CCNA_02458	0.48	-3.3
2,600,314	-		CCNA_02458	0.48	-0.4
2,600,314	-		CCNA_02458	0.48	-0.2
2,600,315	-		CCNA_02458	0.48	+1.9
2,600,319	+		CCNA_02458	0.49	+1.9
2,600,319	+		CCNA_02458	0.49	-0.5
2,600,319	+		CCNA_02458	0.49	-1.8
2,600,319	+		CCNA_02458	0.49	-2.6
2,600,319	+		CCNA_02458	0.49	-1.1
2,600,324	+		CCNA_02458	0.49	-2.9
2,600,327	-		CCNA_02458	0.49	-0.9
2,600,327	-		CCNA_02458	0.49	-1.1
2,600,327	-		CCNA_02458	0.49	-0.6
2,600,327	-		CCNA_02458	0.49	+1.9
2,600,327	-		CCNA_02458	0.49	-1.2
2,600,329	+		CCNA_02458	0.49	-2.9
2,600,329	+		CCNA_02458	0.49	-1.6
2,600,334	+		CCNA_02458	0.50	-3.6
2,600,337	-		CCNA_02458	0.50	-1.4
2,600,337	-		CCNA_02458	0.50	+0.9
2,600,337	-		CCNA_02458	0.50	-1.1
2,600,337	-		CCNA_02458	0.50	-1.2
2,600,337	-		CCNA_02458	0.50	-1.1
2,600,352	+		CCNA_02458	0.51	+1.9
2,600,375	-				-2.1
2,600,379	+		CCNA_02458	0.53	-1.3
2,600,379	+		CCNA_02458	0.53	-3.2
2,600,387	-		CCNA_02458	0.53	-0.1
2,600,407	+		CCNA_02458	0.55	-1.0
2,600,430	-		CCNA_02458	0.56	-2.8
2,600,444	+		CCNA_02458	0.57	+1.9
2,600,453	+		CCNA_02458	0.58	-2.6
2,600,456	-		CCNA_02458	0.58	+1.9
2,600,505	+		CCNA_02458	0.62	-3.3
2,600,510	+		CCNA_02458	0.62	-3.4
2,600,675	-		CCNA_02458	0.73	+0.9
2,600,685	+		CCNA_02458	0.74	-0.6
2,600,722	+		CCNA_02458	0.77	-0.1
2,600,726	-		CCNA_02458	0.77	+0.4
2,600,801	+		CCNA_02458	0.82	-2.0
2,600,802	+		CCNA_02458	0.82	+0.9
2,600,808	+		CCNA_02458	0.82	-2.7
2,600,808	+		CCNA_02458	0.82	-2.7
2,600,808	+		CCNA_02458	0.82	-1.1
2,600,809	-		CCNA_02458	0.83	-0.9
2,600,856	+		CCNA_02458	0.86	-1.8
2,600,856	+		CCNA_02458	0.86	+1.9
2,600,856	+		CCNA_02458	0.86	-2.2
2,600,856	+		CCNA_02458	0.86	-2.1
2,600,856	+		CCNA_02458	0.86	-2.3
2,600,856	+		CCNA_02458	0.86	-0.6
2,600,856	+		CCNA_02458	0.86	-1.6
2,600,856	+		CCNA_02458	0.86	-2.0
2,600,864	-		CCNA_02458	0.86	-0.4
2,600,864	-		CCNA_02458	0.86	-0.6
2,600,864	-		CCNA_02458	0.86	-1.8
2,600,864	-		CCNA_02458	0.86	-1.6
2,600,864	-		CCNA_02458	0.86	+1.9
2,600,864	-		CCNA_02458	0.86	-1.9
2,600,872	+		CCNA_02458	0.87	+1.9
2,600,894	+				-2.3
2,600,907	+		CCNA_02458	0.89	-3.4
2,600,912	+		CCNA_02458	0.90	-0.9
2,600,947	+				+3.5
2,600,977	+				-2.4
2,600,977	+				-2.5
2,600,978	-				-1.5
2,600,985	-				-2.6
2,601,007	+				-1.4
2,601,015	-				-2.9
2,601,047	+				+0.2
2,601,053	-				-0.9
2,601,116	+				-3.3
2,601,139	+				-3.2
2,601,139	+				+0.6
2,601,144	+				-2.3
2,601,149	+				-1.1
2,601,151	+				-1.4
2,601,157	-				-0.6
2,601,157	-				-0.1
2,601,159	-				-0.9
2,601,199	+				+1.9
2,601,248	+				-2.5
2,601,256	-				-0.6
2,601,261	-				-1.1
2,601,284	-		CCNA_02459	0.10	-0.4
2,601,286	+		CCNA_02459	0.10	-1.2
2,601,303	+		CCNA_02459	0.11	-0.1
2,601,321	+		CCNA_02459	0.12	-1.6
2,601,321	-		CCNA_02459	0.12	-1.8
2,601,408	-		CCNA_02459	0.16	-0.1
2,601,423	+		CCNA_02459	0.17	-1.5
2,601,423	+		CCNA_02459	0.17	-2.3
2,601,423	+		CCNA_02459	0.17	+0.4
2,601,431	-		CCNA_02459	0.17	-1.8
2,601,474	-		CCNA_02459	0.19	+0.9
2,601,486	+		CCNA_02459	0.20	-2.6
2,601,486	+		CCNA_02459	0.20	-2.2
2,601,486	+		CCNA_02459	0.20	-1.3
2,601,494	-		CCNA_02459	0.20	+1.9
2,601,534	-		CCNA_02459	0.22	-1.2
2,601,534	-		CCNA_02459	0.22	+0.4
2,601,541	+		CCNA_02459	0.22	-2.4
2,601,588	-		CCNA_02459	0.24	-0.4
2,601,606	+		CCNA_02459	0.25	-0.9
2,601,638	+		CCNA_02459	0.27	-2.1
2,601,646	+		CCNA_02459	0.27	-1.6
2,601,654	-		CCNA_02459	0.27	-1.9
2,601,655	+		CCNA_02459	0.27	-1.1
2,601,699	-		CCNA_02459	0.29	-0.9
2,601,706	+		CCNA_02459	0.30	-0.2
2,601,714	-		CCNA_02459	0.30	-0.6
2,601,742	+		CCNA_02459	0.31	+0.4
2,601,788	+		CCNA_02459	0.34	-1.0
2,601,788	+		CCNA_02459	0.34	+0.6
2,601,788	+		CCNA_02459	0.34	-2.3
2,601,788	+		CCNA_02459	0.34	+0.1
2,601,788	+		CCNA_02459	0.34	-1.6
2,601,796	-		CCNA_02459	0.34	-1.2
2,601,798	+				-1.2
2,601,798	+		CCNA_02459	0.34	-0.2
2,601,798	+		CCNA_02459	0.34	-1.9
2,601,798	+		CCNA_02459	0.34	-0.4
2,601,798	+		CCNA_02459	0.34	-2.3
2,601,798	+		CCNA_02459	0.34	-1.4
2,601,798	+		CCNA_02459	0.34	+1.9
2,601,799	+		CCNA_02459	0.34	-1.8
2,601,800	+		CCNA_02459	0.34	-0.1
2,601,806	-		CCNA_02459	0.34	-2.4
2,601,806	-		CCNA_02459	0.34	-3.5
2,601,806	-		CCNA_02459	0.34	-0.6
2,601,806	-		CCNA_02459	0.34	-0.1
2,601,806	-		CCNA_02459	0.34	-1.2
2,601,812	-		CCNA_02459	0.35	-1.1
2,601,823	+		CCNA_02459	0.35	-2.1
2,601,823	+		CCNA_02459	0.35	-1.1
2,601,865	-		CCNA_02459	0.37	+1.9
2,601,865	-		CCNA_02459	0.37	-2.2
2,601,909	-		CCNA_02459	0.39	+1.9
2,601,938	-		CCNA_02459	0.41	-0.9
2,601,956	-		CCNA_02459	0.41	-0.9
2,601,998	+		CCNA_02459	0.43	-0.7
2,602,045	+		CCNA_02459	0.46	-2.6
2,602,077	-		CCNA_02459	0.47	-0.6
2,602,112	+		CCNA_02459	0.49	-2.0
2,602,112	+		CCNA_02459	0.49	-2.4
2,602,112	+		CCNA_02459	0.49	-2.3
2,602,112	-		CCNA_02459	0.49	-2.7
2,602,133	-		CCNA_02459	0.50	+1.9
2,602,144	+		CCNA_02459	0.50	-2.5
2,602,144	+		CCNA_02459	0.50	-2.6
2,602,152	-		CCNA_02459	0.51	-3.0
2,602,176	+		CCNA_02459	0.52	-0.6
2,602,189	+		CCNA_02459	0.52	+0.9
2,602,259	-		CCNA_02459	0.56	-1.6
2,602,264	+		CCNA_02459	0.56	-2.1
2,602,264	+		CCNA_02459	0.56	-3.1
2,602,299	-		CCNA_02459	0.57	+0.9
2,602,299	-		CCNA_02459	0.57	-1.2
2,602,310	-		CCNA_02459	0.58	-0.4
2,602,310	-		CCNA_02459	0.58	-0.1
2,602,311	+		CCNA_02459	0.58	-2.8
2,602,318	+		CCNA_02459	0.58	-2.0
2,602,318	+		CCNA_02459	0.58	-2.3
2,602,319	-		CCNA_02459	0.58	-1.2
2,602,319	-		CCNA_02459	0.58	+0.9
2,602,338	+		CCNA_02459	0.59	-0.4
2,602,340	-		CCNA_02459	0.59	-0.1
2,602,348	-		CCNA_02459	0.60	-1.8
2,602,353	-				-0.9
2,602,353	-		CCNA_02459	0.60	+1.9
2,602,356	+		CCNA_02459	0.60	-2.6
2,602,364	-		CCNA_02459	0.60	+1.9
2,602,399	-		CCNA_02459	0.62	-0.6
2,602,403	-		CCNA_02459	0.62	-0.1
2,602,407	-		CCNA_02459	0.62	-2.0
2,602,409	+		CCNA_02459	0.63	-0.9
2,602,416	+		CCNA_02459	0.63	-2.7
2,602,416	+		CCNA_02459	0.63	-1.3
2,602,424	-		CCNA_02459	0.63	-1.0
2,602,424	-		CCNA_02459	0.63	-1.8
2,602,440	+		CCNA_02459	0.64	-3.0
2,602,440	+		CCNA_02459	0.64	-2.1
2,602,448	-		CCNA_02459	0.64	-1.7
2,602,453	-		CCNA_02459	0.65	-1.2
2,602,479	-		CCNA_02459	0.66	-3.3
2,602,479	-		CCNA_02459	0.66	-1.4
2,602,527	+		CCNA_02459	0.68	-1.2
2,602,527	+		CCNA_02459	0.68	+0.2
2,602,527	+		CCNA_02459	0.68	-0.1
2,602,527	+		CCNA_02459	0.68	-2.6
2,602,535	-		CCNA_02459	0.68	+0.4
2,602,565	+		CCNA_02459	0.70	-1.1
2,602,576	+		CCNA_02459	0.70	-1.4
2,602,611	+		CCNA_02459	0.72	-3.1
2,602,678	+		CCNA_02459	0.75	-1.2
2,602,701	+		CCNA_02459	0.76	-2.7
2,602,732	-		CCNA_02459	0.78	-2.1
2,602,732	-		CCNA_02459	0.78	-1.8
2,602,767	+		CCNA_02459	0.79	-1.9
2,602,767	+		CCNA_02459	0.79	-3.3
2,602,767	+		CCNA_02459	0.79	-1.4
2,602,767	+		CCNA_02459	0.79	-3.3
2,602,767	+		CCNA_02459	0.79	-3.4
2,602,767	+		CCNA_02459	0.79	-0.9
2,602,769	-		CCNA_02459	0.79	-1.8
2,602,769	-		CCNA_02459	0.79	-3.0
2,602,774	+		CCNA_02459	0.80	-1.9
2,602,775	-		CCNA_02459	0.80	-2.9
2,602,775	-		CCNA_02459	0.80	-0.1
2,602,775	-		CCNA_02459	0.80	+0.4
2,602,799	-		CCNA_02459	0.81	-1.5
2,602,831	+		CCNA_02459	0.82	-3.2
2,602,831	+		CCNA_02459	0.82	+0.5
2,602,839	-		CCNA_02459	0.83	-0.4
2,602,840	+		CCNA_02459	0.83	-0.1
2,602,848	-		CCNA_02459	0.83	-0.4
2,602,861	+		CCNA_02459	0.84	-2.5
2,602,875	-		CCNA_02459	0.84	-1.1
2,602,914	+		CCNA_02459	0.86	-2.6
2,602,914	+		CCNA_02459	0.86	-1.6
2,602,922	-		CCNA_02459	0.86	-1.4
2,602,922	-		CCNA_02459	0.86	-0.2
2,602,956	-		CCNA_02459	0.88	-1.8
2,602,996	+		CCNA_02459	0.90	-1.4
2,603,002	+				-2.1
2,603,005	-				+1.9
2,603,009	-				-2.2
2,603,038	-				-1.6
2,603,060	-				-0.6
2,603,062	+				+0.4
2,603,062	+				-1.4
2,603,070	-				-0.9
2,603,084	-				-0.1
2,603,091	+				-0.5
2,603,091	+				-2.6
2,603,091	-				-2.1
2,603,091	-				-2.1
2,603,098	+				-1.5
2,603,099	-				-2.5
2,603,142	+				-2.1
2,603,176	+				-2.4
2,603,195	+				+0.6
2,603,200	+				-1.1
2,603,201	-				-2.7
2,603,201	-				-2.2
2,603,201	-				-3.1
2,603,203	-				-0.5
2,603,205	+				+0.1
2,603,205	+				+0.9
2,603,213	-				-0.4
2,603,213	-				-0.9
2,603,240	+				-0.1
2,603,257	+		CCNA_02460	0.11	+0.8
2,603,295	+		CCNA_02460	0.19	+0.5
2,603,375	+		CCNA_02460	0.36	-0.6
2,603,391	-		CCNA_02460	0.40	+1.4
2,603,393	+		CCNA_02460	0.40	-0.2
2,603,393	+		CCNA_02460	0.40	-1.1
2,603,401	-		CCNA_02460	0.42	+0.2
2,603,416	+		CCNA_02460	0.45	-1.1
2,603,416	+		CCNA_02460	0.45	-3.1
2,603,416	+		CCNA_02460	0.45	-1.8
2,603,421	+		CCNA_02460	0.46	+0.4
2,603,421	+		CCNA_02460	0.46	-1.8
2,603,424	-		CCNA_02460	0.47	-0.9
2,603,424	-		CCNA_02460	0.47	-0.0
2,603,437	+		CCNA_02460	0.50	-0.9
2,603,447	+		CCNA_02460	0.52	+1.9
2,603,479	+		CCNA_02460	0.59	-1.6
2,603,481	+		CCNA_02460	0.59	-1.1
2,603,487	-		CCNA_02460	0.60	-1.0
2,603,520	+		CCNA_02460	0.68	-0.5
2,603,539	+		CCNA_02460	0.72	-0.4
2,603,548	-		CCNA_02460	0.74	+0.3
2,603,548	-		CCNA_02460	0.74	+0.0
2,603,549	+		CCNA_02460	0.74	+1.2
2,603,557	-		CCNA_02460	0.76	-0.1
2,603,557	-		CCNA_02460	0.76	-0.8
2,603,559	-		CCNA_02460	0.76	+0.0
2,603,575	-		CCNA_02460	0.79	+0.5
2,603,577	+		CCNA_02460	0.80	-1.3
2,603,590	-		CCNA_02460	0.83	-0.1
2,603,613	-		CCNA_02460	0.88	+0.3
2,603,673	-				+0.7
2,603,675	+				-1.9
2,603,675	+				+0.3
2,603,683	-				+0.3
2,603,683	-				+0.3
2,603,683	-				+1.5
2,603,683	-				+0.6
2,603,754	+		CCNA_02461	0.10	-1.2
2,603,755	-		CCNA_02461	0.11	+0.7
2,603,755	-		CCNA_02461	0.11	+0.7
2,603,770	-		CCNA_02461	0.14	+0.2
2,603,770	-		CCNA_02461	0.14	-1.5
2,603,790	-		CCNA_02461	0.18	-1.1
2,603,836	+		CCNA_02461	0.28	-2.4
2,603,905	-		CCNA_02461	0.43	+1.0
2,603,935	+		CCNA_02461	0.49	+0.2
2,603,935	-		CCNA_02461	0.49	+0.3
2,603,940	+		CCNA_02461	0.50	-1.1
2,603,948	-		CCNA_02461	0.52	+1.0
2,603,948	-		CCNA_02461	0.52	+1.4
2,603,973	-		CCNA_02461	0.57	-0.1
2,603,990	+		CCNA_02461	0.61	+1.9
2,603,994	-		CCNA_02461	0.62	-0.3
2,604,005	+		CCNA_02461	0.64	-1.6
2,604,013	-		CCNA_02461	0.66	+0.6
2,604,026	-		CCNA_02461	0.69	-0.3
2,604,062	-		CCNA_02461	0.77	-0.3
2,604,065	+		CCNA_02461	0.77	+0.1
2,604,073	-		CCNA_02461	0.79	-0.5
2,604,073	-		CCNA_02461	0.79	-1.9
2,604,114	+		CCNA_02461	0.88	-2.0
2,604,122	-		CCNA_02461	0.89	-0.5
2,604,173	-				-0.7
2,604,185	+				-0.1