Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01024

Experiment: PYE_noCalcium 4C survival rep1 58 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 4C survival rep1 58 days
1,110,631	-		CCNA_01023	0.47	-1.6
1,110,652	+		CCNA_01023	0.48	+1.3
1,110,671	-		CCNA_01023	0.49	-0.0
1,110,687	+		CCNA_01023	0.50	-0.5
1,110,687	+		CCNA_01023	0.50	+0.8
1,110,687	+		CCNA_01023	0.50	-0.2
1,110,687	+		CCNA_01023	0.50	-0.6
1,110,687	+		CCNA_01023	0.50	+0.6
1,110,687	+		CCNA_01023	0.50	+0.5
1,110,687	+		CCNA_01023	0.50	-0.7
1,110,687	+		CCNA_01023	0.50	+0.9
1,110,687	+		CCNA_01023	0.50	-2.1
1,110,687	+		CCNA_01023	0.50	-0.0
1,110,687	+		CCNA_01023	0.50	+2.0
1,110,687	+		CCNA_01023	0.50	-0.6
1,110,687	+		CCNA_01023	0.50	+1.0
1,110,687	+		CCNA_01023	0.50	+0.6
1,110,687	+		CCNA_01023	0.50	-1.3
1,110,689	+		CCNA_01023	0.50	-0.0
1,110,689	+		CCNA_01023	0.50	-0.4
1,110,695	-		CCNA_01023	0.51	-0.2
1,110,695	-		CCNA_01023	0.51	-0.9
1,110,695	-		CCNA_01023	0.51	-1.5
1,110,695	-		CCNA_01023	0.51	+0.4
1,110,695	-		CCNA_01023	0.51	-1.3
1,110,695	-		CCNA_01023	0.51	-1.4
1,110,695	-		CCNA_01023	0.51	-2.2
1,110,695	-		CCNA_01023	0.51	+0.7
1,110,695	-		CCNA_01023	0.51	+0.4
1,110,695	-		CCNA_01023	0.51	+0.6
1,110,695	-		CCNA_01023	0.51	+3.0
1,110,695	-		CCNA_01023	0.51	-1.9
1,110,695	-		CCNA_01023	0.51	-1.3
1,110,695	-		CCNA_01023	0.51	+0.4
1,110,695	-		CCNA_01023	0.51	-1.8
1,110,695	-		CCNA_01023	0.51	+1.2
1,110,695	-		CCNA_01023	0.51	+1.0
1,110,695	-		CCNA_01023	0.51	-1.6
1,110,697	-		CCNA_01023	0.51	-0.3
1,110,699	+		CCNA_01023	0.51	+0.4
1,110,706	+		CCNA_01023	0.51	+0.6
1,110,707	-		CCNA_01023	0.52	-0.3
1,110,707	-		CCNA_01023	0.52	-0.8
1,110,713	-		CCNA_01023	0.52	-0.3
1,110,731	-		CCNA_01023	0.53	-1.8
1,110,747	-		CCNA_01023	0.54	-2.6
1,110,774	-		CCNA_01023	0.56	-0.7
1,110,774	-		CCNA_01023	0.56	-1.0
1,110,781	-		CCNA_01023	0.56	-0.0
1,110,783	+		CCNA_01023	0.56	+0.8
1,110,807	-		CCNA_01023	0.58	-1.3
1,110,814	+		CCNA_01023	0.58	-1.4
1,110,916	-		CCNA_01023	0.65	-1.0
1,110,952	+		CCNA_01023	0.67	-1.6
1,110,953	+		CCNA_01023	0.67	+0.6
1,110,960	-		CCNA_01023	0.68	-2.0
1,111,100	-		CCNA_01023	0.77	+0.3
1,111,100	-		CCNA_01023	0.77	+1.5
1,111,100	-		CCNA_01023	0.77	+1.0
1,111,110	-		CCNA_01023	0.77	-1.9
1,111,120	-		CCNA_01023	0.78	-0.3
1,111,144	+		CCNA_01023	0.80	-0.2
1,111,152	-		CCNA_01023	0.80	+0.5
1,111,160	+		CCNA_01023	0.81	-1.5
1,111,168	-		CCNA_01023	0.81	-0.8
1,111,182	+		CCNA_01023	0.82	-1.0
1,111,182	+		CCNA_01023	0.82	-0.4
1,111,182	+		CCNA_01023	0.82	-3.3
1,111,185	-		CCNA_01023	0.82	-0.8
1,111,188	+		CCNA_01023	0.83	-0.4
1,111,188	+		CCNA_01023	0.83	-0.2
1,111,190	-		CCNA_01023	0.83	-0.4
1,111,190	-		CCNA_01023	0.83	-0.0
1,111,190	-		CCNA_01023	0.83	+0.2
1,111,196	-		CCNA_01023	0.83	-1.5
1,111,196	-		CCNA_01023	0.83	+1.0
1,111,197	-		CCNA_01023	0.83	+0.9
1,111,257	+		CCNA_01023	0.87	-1.5
1,111,259	+		CCNA_01023	0.87	-3.4
1,111,265	-		CCNA_01023	0.87	+3.9
1,111,265	-		CCNA_01023	0.87	+3.0
1,111,265	-		CCNA_01023	0.87	+0.5
1,111,265	-		CCNA_01023	0.87	+0.2
1,111,267	-		CCNA_01023	0.88	-0.3
1,111,299	-		CCNA_01023	0.90	-0.7
1,111,301	-		CCNA_01023	0.90	+0.9
1,111,301	-		CCNA_01023	0.90	+1.2
1,111,321	+				-2.3
1,111,328	+				+0.4
1,111,328	+				-2.3
1,111,328	+				-1.4
1,111,328	+				-1.4
1,111,335	-				-1.5
1,111,336	-				+0.5
1,111,336	-				-0.9
1,111,336	-				-0.1
1,111,336	-				-0.9
1,111,336	-				+0.3
1,111,336	-				+0.6
1,111,348	+				-0.8
1,111,370	-				+0.7
1,111,425	+				-1.8
1,111,440	+				+2.4
1,111,460	-				+0.7
1,111,474	+				+2.0
1,111,476	-				-0.3
1,111,504	-				+1.3
1,111,511	-				+0.2
1,111,529	+				-1.2
1,111,537	-				+0.8
1,111,537	-				+1.5
1,111,546	-				-1.5
1,111,579	+				+1.2
1,111,613	-				+0.4
1,111,613	-				+0.8
1,111,660	+				-1.5
1,111,660	+				-0.6
1,111,660	+				+0.2
1,111,660	+				-1.0
1,111,660	+				+1.0
1,111,660	+				-0.3
1,111,668	-		CCNA_01024	0.10	+1.9
1,111,668	-		CCNA_01024	0.10	+1.8
1,111,668	-		CCNA_01024	0.10	+2.0
1,111,668	-		CCNA_01024	0.10	+1.9
1,111,670	+		CCNA_01024	0.11	+3.0
1,111,712	+		CCNA_01024	0.19	+1.3
1,111,788	+		CCNA_01024	0.35	+2.0
1,111,791	-		CCNA_01024	0.35	+1.6
1,111,791	-		CCNA_01024	0.35	+4.1
1,111,791	-		CCNA_01024	0.35	+2.0
1,111,791	-		CCNA_01024	0.35	+2.4
1,111,837	+		CCNA_01024	0.44	-0.6
1,111,844	+		CCNA_01024	0.46	+0.4
1,111,845	-		CCNA_01024	0.46	+2.5
1,111,847	-		CCNA_01024	0.46	+1.5
1,111,849	+		CCNA_01024	0.47	-1.0
1,111,857	-		CCNA_01024	0.48	+2.6
1,111,857	-		CCNA_01024	0.48	+2.9
1,111,857	-		CCNA_01024	0.48	+2.6
1,111,876	-		CCNA_01024	0.52	+2.1
1,111,881	-		CCNA_01024	0.53	+2.3
1,111,881	-		CCNA_01024	0.53	+2.7
1,111,881	-		CCNA_01024	0.53	+1.7
1,111,881	-		CCNA_01024	0.53	+2.3
1,111,881	-		CCNA_01024	0.53	+1.8
1,111,881	-		CCNA_01024	0.53	+3.1
1,111,915	+		CCNA_01024	0.60	+0.7
1,111,916	+		CCNA_01024	0.60	+0.7
1,111,921	-		CCNA_01024	0.61	+3.1
1,111,923	-		CCNA_01024	0.62	+2.4
1,111,931	-		CCNA_01024	0.63	+2.6
1,111,963	+		CCNA_01024	0.70	+2.6
1,111,963	+		CCNA_01024	0.70	+3.0
1,111,971	-		CCNA_01024	0.72	+2.4
1,111,971	-		CCNA_01024	0.72	+2.8
1,111,971	-		CCNA_01024	0.72	+2.5
1,111,971	-		CCNA_01024	0.72	+2.7
1,111,971	-		CCNA_01024	0.72	+2.2
1,111,971	-		CCNA_01024	0.72	+2.6
1,111,971	-		CCNA_01024	0.72	+2.0
1,112,028	+		CCNA_01024	0.83	-1.8
1,112,036	-		CCNA_01024	0.85	+1.6
1,112,036	-		CCNA_01024	0.85	+2.8
1,112,036	-		CCNA_01024	0.85	+1.2
1,112,036	-		CCNA_01024	0.85	+2.2
1,112,036	-		CCNA_01024	0.85	+2.5
1,112,056	-		CCNA_01024	0.89	+3.0
1,112,103	+				-2.0
1,112,106	-				+2.3
1,112,109	-				+1.4
1,112,202	-		CCNA_01025	0.12	+1.9
1,112,257	-		CCNA_01025	0.21	+2.0
1,112,317	-		CCNA_01025	0.31	+2.4
1,112,346	+		CCNA_01025	0.36	+1.7
1,112,355	-		CCNA_01025	0.37	+1.9
1,112,377	+		CCNA_01025	0.41	+2.0
1,112,385	-		CCNA_01025	0.42	+2.4
1,112,385	-		CCNA_01025	0.42	-0.3
1,112,385	-		CCNA_01025	0.42	+2.4
1,112,389	+		CCNA_01025	0.42	-0.6
1,112,389	+		CCNA_01025	0.42	+0.4
1,112,397	-		CCNA_01025	0.44	+2.2
1,112,397	-		CCNA_01025	0.44	+2.5
1,112,397	-		CCNA_01025	0.44	+2.3
1,112,404	+		CCNA_01025	0.45	-0.6
1,112,407	-		CCNA_01025	0.45	+2.0
1,112,437	-		CCNA_01025	0.50	+2.1
1,112,461	-		CCNA_01025	0.54	+1.9
1,112,500	+		CCNA_01025	0.60	+2.0
1,112,504	-		CCNA_01025	0.61	+2.1
1,112,508	-		CCNA_01025	0.62	+2.6
1,112,515	+		CCNA_01025	0.63	-2.0
1,112,517	+		CCNA_01025	0.63	-1.3
1,112,662	+		CCNA_01025	0.86	+0.4
1,112,675	-		CCNA_01025	0.88	+2.4
1,112,675	-		CCNA_01025	0.88	+2.6
1,112,675	-		CCNA_01025	0.88	+1.0
1,112,675	-		CCNA_01025	0.88	+2.5
1,112,675	-		CCNA_01025	0.88	+1.9
1,112,675	-		CCNA_01025	0.88	+2.2
1,112,675	-		CCNA_01025	0.88	+2.9
1,112,677	-		CCNA_01025	0.89	+1.9
1,112,677	-		CCNA_01025	0.89	+1.9
1,112,688	-				+2.6
1,112,700	-				+2.1
1,112,724	-				+2.6
1,112,784	+				-0.6
1,112,792	-				+3.2
1,112,818	+		CCNA_01026	0.12	-1.8
1,112,826	-		CCNA_01026	0.13	+0.9
1,112,875	+		CCNA_01026	0.20	+3.3
1,112,883	+		CCNA_01026	0.21	-1.4
1,112,883	-		CCNA_01026	0.21	+1.2
1,112,970	-		CCNA_01026	0.33	+0.8
1,112,975	-		CCNA_01026	0.34	+0.4
1,112,975	-		CCNA_01026	0.34	+0.7
1,112,997	-		CCNA_01026	0.37	+2.6
1,113,033	+		CCNA_01026	0.42	-0.0
1,113,042	-		CCNA_01026	0.43	+0.3
1,113,042	-		CCNA_01026	0.43	+0.5
1,113,042	-		CCNA_01026	0.43	+0.7
1,113,091	+		CCNA_01026	0.50	-0.9
1,113,091	+		CCNA_01026	0.50	-0.1
1,113,092	-		CCNA_01026	0.50	-0.3
1,113,096	+		CCNA_01026	0.51	-1.6
1,113,099	-		CCNA_01026	0.51	+2.1
1,113,101	+		CCNA_01026	0.51	-0.6