Experiment: MoLS4 with L-Serine (N) without Tungstate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt glnQ and glnP are separated by 73 nucleotides glnP and glnH are separated by 114 nucleotides glnH and DVU0108 are separated by 291 nucleotides
DVU0105: glnQ - glutamine ABC transporter, ATP-binding protein (TIGR), at 138,176 to 138,910
glnQ
DVU0106: glnP - glutamine ABC transporter, permease protein (TIGR), at 138,984 to 139,655
glnP
DVU0107: glnH - glutamine ABC transporter, periplasmic glutamine-binding protein (TIGR), at 139,770 to 140,519
glnH
DVU0108: DVU0108 - hypothetical protein (TIGR), at 140,811 to 140,918
DVU0108
Position (kb)
139
140
141 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 138.775 kb on - strand, within glnQ at 138.790 kb on + strand, within glnQ at 138.798 kb on - strand, within glnQ at 138.875 kb on - strand at 139.039 kb on + strand at 139.049 kb on - strand at 139.188 kb on - strand, within glnP at 139.226 kb on + strand, within glnP at 139.231 kb on + strand, within glnP at 139.252 kb on + strand, within glnP at 139.252 kb on + strand, within glnP at 139.252 kb on + strand, within glnP at 139.252 kb on + strand, within glnP at 139.260 kb on - strand, within glnP at 139.260 kb on - strand, within glnP at 139.260 kb on - strand, within glnP at 139.285 kb on + strand, within glnP at 139.285 kb on + strand, within glnP at 139.293 kb on - strand, within glnP at 139.293 kb on - strand, within glnP at 139.295 kb on + strand, within glnP at 139.405 kb on - strand, within glnP at 139.532 kb on + strand, within glnP at 139.532 kb on + strand, within glnP at 139.573 kb on - strand, within glnP at 139.693 kb on - strand at 139.742 kb on + strand at 139.831 kb on + strand at 139.831 kb on + strand at 139.831 kb on + strand at 139.839 kb on - strand at 139.849 kb on - strand, within glnH at 139.897 kb on + strand, within glnH at 139.905 kb on - strand, within glnH at 139.905 kb on - strand, within glnH at 139.930 kb on + strand, within glnH at 139.930 kb on + strand, within glnH at 139.930 kb on + strand, within glnH at 139.936 kb on + strand, within glnH at 139.937 kb on - strand, within glnH at 139.938 kb on - strand, within glnH at 139.947 kb on + strand, within glnH at 139.967 kb on + strand, within glnH at 140.011 kb on + strand, within glnH at 140.044 kb on + strand, within glnH at 140.136 kb on + strand, within glnH at 140.144 kb on - strand, within glnH at 140.146 kb on + strand, within glnH at 140.154 kb on - strand, within glnH at 140.176 kb on + strand, within glnH at 140.336 kb on - strand, within glnH at 140.343 kb on - strand, within glnH at 140.399 kb on - strand, within glnH at 140.465 kb on - strand at 140.501 kb on - strand at 140.543 kb on + strand at 140.564 kb on - strand at 140.658 kb on + strand at 140.666 kb on + strand at 140.668 kb on + strand at 140.757 kb on + strand at 140.757 kb on + strand at 140.788 kb on + strand at 140.808 kb on - strand at 140.818 kb on - strand at 140.898 kb on - strand, within DVU0108 at 140.898 kb on - strand, within DVU0108 at 140.927 kb on - strand at 141.065 kb on + strand at 141.155 kb on + strand at 141.163 kb on - strand at 141.199 kb on - strand at 141.215 kb on + strand at 141.239 kb on + strand at 141.247 kb on - strand at 141.284 kb on + strand at 141.302 kb on - strand at 141.302 kb on - strand at 141.355 kb on - strand at 141.369 kb on - strand at 141.373 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Serine (N) without Tungstate remove 138,775 - glnQ DVU0105 0.81 -1.0 138,790 + glnQ DVU0105 0.84 +0.1 138,798 - glnQ DVU0105 0.85 -0.3 138,875 - -0.9 139,039 + -0.9 139,049 - -1.9 139,188 - glnP DVU0106 0.30 -0.1 139,226 + glnP DVU0106 0.36 -2.6 139,231 + glnP DVU0106 0.37 -1.2 139,252 + glnP DVU0106 0.40 -0.9 139,252 + glnP DVU0106 0.40 -1.0 139,252 + glnP DVU0106 0.40 -1.1 139,252 + glnP DVU0106 0.40 -0.8 139,260 - glnP DVU0106 0.41 +2.3 139,260 - glnP DVU0106 0.41 -0.8 139,260 - glnP DVU0106 0.41 -0.6 139,285 + glnP DVU0106 0.45 -0.4 139,285 + glnP DVU0106 0.45 -0.7 139,293 - glnP DVU0106 0.46 -1.1 139,293 - glnP DVU0106 0.46 -1.2 139,295 + glnP DVU0106 0.46 -1.2 139,405 - glnP DVU0106 0.63 -0.1 139,532 + glnP DVU0106 0.82 -1.3 139,532 + glnP DVU0106 0.82 +0.3 139,573 - glnP DVU0106 0.88 -1.1 139,693 - -1.1 139,742 + -1.4 139,831 + -1.0 139,831 + -1.0 139,831 + -0.2 139,839 - +0.3 139,849 - glnH DVU0107 0.11 +0.7 139,897 + glnH DVU0107 0.17 -1.2 139,905 - glnH DVU0107 0.18 +0.1 139,905 - glnH DVU0107 0.18 -0.4 139,930 + glnH DVU0107 0.21 -0.6 139,930 + glnH DVU0107 0.21 -2.3 139,930 + glnH DVU0107 0.21 -1.2 139,936 + glnH DVU0107 0.22 -1.2 139,937 - glnH DVU0107 0.22 -1.0 139,938 - glnH DVU0107 0.22 -0.5 139,947 + glnH DVU0107 0.24 -1.3 139,967 + glnH DVU0107 0.26 -1.2 140,011 + glnH DVU0107 0.32 -1.0 140,044 + glnH DVU0107 0.37 -1.2 140,136 + glnH DVU0107 0.49 +0.2 140,144 - glnH DVU0107 0.50 -1.1 140,146 + glnH DVU0107 0.50 -1.1 140,154 - glnH DVU0107 0.51 -1.0 140,176 + glnH DVU0107 0.54 -1.7 140,336 - glnH DVU0107 0.75 -0.8 140,343 - glnH DVU0107 0.76 -1.2 140,399 - glnH DVU0107 0.84 +1.0 140,465 - +0.9 140,501 - -1.2 140,543 + -0.7 140,564 - +0.7 140,658 + -0.1 140,666 + -0.6 140,668 + -0.1 140,757 + -1.1 140,757 + -0.1 140,788 + +0.2 140,808 - -0.3 140,818 - -0.1 140,898 - DVU0108 0.81 -0.2 140,898 - DVU0108 0.81 +0.4 140,927 - -0.2 141,065 + -0.3 141,155 + -0.1 141,163 - -0.0 141,199 - -0.7 141,215 + +0.6 141,239 + -0.1 141,247 - -1.2 141,284 + -0.3 141,302 - -0.2 141,302 - -1.0 141,355 - -0.8 141,369 - -0.3 141,373 + -0.2
Or see this region's nucleotide sequence