Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2374

Experiment: BG11 with nitrite 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with nitrite 2.5 mM
2,440,450	-		Synpcc7942_2373	0.11	+0.5
2,440,492	+		Synpcc7942_2373	0.15	-3.1
2,440,498	-		Synpcc7942_2373	0.15	+0.2
2,440,527	-		Synpcc7942_2373	0.18	+0.8
2,440,544	-		Synpcc7942_2373	0.20	+1.4
2,440,545	+		Synpcc7942_2373	0.20	-1.2
2,440,551	+		Synpcc7942_2373	0.20	-0.2
2,440,553	+		Synpcc7942_2373	0.21	+0.4
2,440,553	+		Synpcc7942_2373	0.21	+0.1
2,440,574	+		Synpcc7942_2373	0.23	+0.4
2,440,609	+		Synpcc7942_2373	0.26	+0.1
2,440,641	+		Synpcc7942_2373	0.29	-1.0
2,440,642	+		Synpcc7942_2373	0.29	+0.3
2,440,642	+		Synpcc7942_2373	0.29	-0.6
2,440,650	-		Synpcc7942_2373	0.30	-0.5
2,440,653	+		Synpcc7942_2373	0.30	-0.4
2,440,675	+		Synpcc7942_2373	0.32	-0.4
2,440,691	-		Synpcc7942_2373	0.34	-1.1
2,440,691	-		Synpcc7942_2373	0.34	-1.3
2,440,691	-		Synpcc7942_2373	0.34	-0.5
2,440,721	-		Synpcc7942_2373	0.37	-1.3
2,440,756	+		Synpcc7942_2373	0.40	-1.0
2,440,769	-		Synpcc7942_2373	0.42	-0.2
2,440,864	-		Synpcc7942_2373	0.51	+1.2
2,440,895	-		Synpcc7942_2373	0.54	-0.1
2,440,902	+		Synpcc7942_2373	0.54	-0.0
2,440,902	+		Synpcc7942_2373	0.54	-0.6
2,440,907	+		Synpcc7942_2373	0.55	-0.7
2,440,907	+		Synpcc7942_2373	0.55	-1.7
2,440,907	+		Synpcc7942_2373	0.55	+0.1
2,440,915	-		Synpcc7942_2373	0.56	+0.4
2,440,920	-		Synpcc7942_2373	0.56	-0.9
2,440,922	+		Synpcc7942_2373	0.56	-0.3
2,440,922	+		Synpcc7942_2373	0.56	-0.5
2,440,925	-		Synpcc7942_2373	0.57	-0.5
2,440,951	-		Synpcc7942_2373	0.59	-0.7
2,440,954	+		Synpcc7942_2373	0.59	-0.2
2,440,962	-		Synpcc7942_2373	0.60	-1.8
2,440,962	-		Synpcc7942_2373	0.60	+0.4
2,440,973	+		Synpcc7942_2373	0.61	+0.3
2,440,982	-		Synpcc7942_2373	0.62	+0.5
2,441,021	+		Synpcc7942_2373	0.66	+0.2
2,441,040	-		Synpcc7942_2373	0.68	+0.1
2,441,055	-		Synpcc7942_2373	0.69	-1.0
2,441,091	-		Synpcc7942_2373	0.73	+0.2
2,441,110	-		Synpcc7942_2373	0.74	-0.0
2,441,119	+		Synpcc7942_2373	0.75	-0.1
2,441,164	-		Synpcc7942_2373	0.80	+1.2
2,441,169	-		Synpcc7942_2373	0.80	-0.5
2,441,177	+		Synpcc7942_2373	0.81	-0.9
2,441,185	-		Synpcc7942_2373	0.82	+0.4
2,441,187	+		Synpcc7942_2373	0.82	+0.6
2,441,187	+		Synpcc7942_2373	0.82	+0.8
2,441,192	+		Synpcc7942_2373	0.82	+0.4
2,441,192	+		Synpcc7942_2373	0.82	+0.8
2,441,192	+		Synpcc7942_2373	0.82	-0.4
2,441,195	-		Synpcc7942_2373	0.83	-0.6
2,441,195	-		Synpcc7942_2373	0.83	+0.1
2,441,195	-		Synpcc7942_2373	0.83	-0.3
2,441,195	-		Synpcc7942_2373	0.83	-0.2
2,441,197	-		Synpcc7942_2373	0.83	-1.3
2,441,200	-		Synpcc7942_2373	0.83	-0.3
2,441,210	+		Synpcc7942_2373	0.84	-0.6
2,441,210	+		Synpcc7942_2373	0.84	+0.6
2,441,228	+		Synpcc7942_2373	0.86	-0.1
2,441,228	+		Synpcc7942_2373	0.86	+0.0
2,441,228	+		Synpcc7942_2373	0.86	-2.7
2,441,231	-		Synpcc7942_2373	0.86	-1.0
2,441,256	-		Synpcc7942_2373	0.89	-1.3
2,441,271	+				+0.3
2,441,274	-				+0.3
2,441,283	+				-1.1
2,441,311	+				-0.5
2,441,348	+				+0.4
2,441,348	+				+0.3
2,441,353	-				-0.0
2,441,367	-				-0.0
2,441,395	+				-0.1
2,441,457	-				+0.8
2,441,470	+				-0.2
2,441,470	+				+1.0
2,441,475	-				+0.8
2,441,505	+				+0.2
2,441,545	+				+0.1
2,441,553	-				-0.0
2,441,553	-				+1.4
2,441,560	+				+0.5
2,441,560	+				+0.7
2,441,568	-				+0.8
2,441,573	+				+0.1
2,441,592	-		Synpcc7942_2374	0.11	+0.5
2,441,592	-		Synpcc7942_2374	0.11	-0.6
2,441,608	-		Synpcc7942_2374	0.12	+1.1
2,441,623	+		Synpcc7942_2374	0.13	+0.6
2,441,624	+		Synpcc7942_2374	0.13	+0.3
2,441,631	-		Synpcc7942_2374	0.14	+0.8
2,441,636	-		Synpcc7942_2374	0.14	+0.7
2,441,695	+		Synpcc7942_2374	0.18	-0.4
2,441,705	-		Synpcc7942_2374	0.19	+1.1
2,441,715	-		Synpcc7942_2374	0.20	+1.1
2,441,726	-		Synpcc7942_2374	0.21	-0.0
2,441,742	+		Synpcc7942_2374	0.22	+0.4
2,441,749	-		Synpcc7942_2374	0.22	-1.0
2,441,749	-		Synpcc7942_2374	0.22	-0.4
2,441,814	+		Synpcc7942_2374	0.27	+0.8
2,441,853	+		Synpcc7942_2374	0.30	+0.0
2,441,853	+		Synpcc7942_2374	0.30	+0.1
2,441,859	-		Synpcc7942_2374	0.30	+0.2
2,441,860	-		Synpcc7942_2374	0.30	+0.6
2,441,878	+		Synpcc7942_2374	0.32	+0.8
2,441,894	-		Synpcc7942_2374	0.33	+1.8
2,441,911	-		Synpcc7942_2374	0.34	-0.2
2,441,911	-		Synpcc7942_2374	0.34	+1.5
2,441,925	+		Synpcc7942_2374	0.35	+1.8
2,441,934	+		Synpcc7942_2374	0.36	+0.2
2,441,937	-		Synpcc7942_2374	0.36	+1.4
2,441,939	+		Synpcc7942_2374	0.36	-0.2
2,441,939	+		Synpcc7942_2374	0.36	+0.2
2,442,011	+		Synpcc7942_2374	0.42	+1.4
2,442,035	-		Synpcc7942_2374	0.43	+0.3
2,442,048	+		Synpcc7942_2374	0.44	+0.4
2,442,056	-		Synpcc7942_2374	0.45	+1.1
2,442,093	+		Synpcc7942_2374	0.48	+0.8
2,442,108	+		Synpcc7942_2374	0.49	+0.4
2,442,108	+		Synpcc7942_2374	0.49	-0.7
2,442,116	-		Synpcc7942_2374	0.49	-0.1
2,442,121	+		Synpcc7942_2374	0.50	+0.1
2,442,121	+		Synpcc7942_2374	0.50	+0.6
2,442,121	+		Synpcc7942_2374	0.50	-1.1
2,442,121	+		Synpcc7942_2374	0.50	-0.3
2,442,121	+		Synpcc7942_2374	0.50	+1.4
2,442,121	+		Synpcc7942_2374	0.50	-1.6
2,442,121	+		Synpcc7942_2374	0.50	+0.9
2,442,121	+		Synpcc7942_2374	0.50	-1.4
2,442,121	+		Synpcc7942_2374	0.50	+0.2
2,442,124	-		Synpcc7942_2374	0.50	+0.8
2,442,129	-		Synpcc7942_2374	0.50	+2.0
2,442,129	-		Synpcc7942_2374	0.50	-0.1
2,442,129	-		Synpcc7942_2374	0.50	+1.1
2,442,129	-		Synpcc7942_2374	0.50	+0.3
2,442,129	-		Synpcc7942_2374	0.50	-1.3
2,442,129	-		Synpcc7942_2374	0.50	-0.2
2,442,129	-		Synpcc7942_2374	0.50	+0.8
2,442,129	-		Synpcc7942_2374	0.50	-1.0
2,442,129	-				+0.8
2,442,129	-		Synpcc7942_2374	0.50	-0.1
2,442,129	-		Synpcc7942_2374	0.50	-0.1
2,442,129	-		Synpcc7942_2374	0.50	+0.0
2,442,129	-		Synpcc7942_2374	0.50	-0.9
2,442,131	+		Synpcc7942_2374	0.50	+0.8
2,442,186	+		Synpcc7942_2374	0.54	-0.9
2,442,186	+		Synpcc7942_2374	0.54	+0.6
2,442,213	+		Synpcc7942_2374	0.56	+0.3
2,442,220	-		Synpcc7942_2374	0.57	-0.2
2,442,253	+		Synpcc7942_2374	0.59	+0.4
2,442,295	+		Synpcc7942_2374	0.62	-0.4
2,442,295	+		Synpcc7942_2374	0.62	-0.6
2,442,295	+		Synpcc7942_2374	0.62	+0.1
2,442,295	+		Synpcc7942_2374	0.62	+0.7
2,442,295	+		Synpcc7942_2374	0.62	+0.2
2,442,295	+		Synpcc7942_2374	0.62	+0.2
2,442,298	+		Synpcc7942_2374	0.63	+0.8
2,442,303	-		Synpcc7942_2374	0.63	+0.6
2,442,303	-		Synpcc7942_2374	0.63	+1.3
2,442,303	-		Synpcc7942_2374	0.63	-0.3
2,442,303	-		Synpcc7942_2374	0.63	+1.3
2,442,324	+		Synpcc7942_2374	0.65	-0.4
2,442,329	+		Synpcc7942_2374	0.65	+1.1
2,442,329	+		Synpcc7942_2374	0.65	-1.7
2,442,361	+		Synpcc7942_2374	0.67	-0.4
2,442,366	+		Synpcc7942_2374	0.68	-0.3
2,442,374	-		Synpcc7942_2374	0.68	+0.2
2,442,374	-		Synpcc7942_2374	0.68	-0.7
2,442,401	+		Synpcc7942_2374	0.70	+1.1
2,442,452	-		Synpcc7942_2374	0.74	+1.2
2,442,452	-		Synpcc7942_2374	0.74	+0.6
2,442,454	+		Synpcc7942_2374	0.74	-0.0
2,442,454	+		Synpcc7942_2374	0.74	+0.0
2,442,462	-		Synpcc7942_2374	0.75	+1.5
2,442,462	-		Synpcc7942_2374	0.75	-0.4
2,442,526	+		Synpcc7942_2374	0.79	+0.1
2,442,526	+		Synpcc7942_2374	0.79	+0.1
2,442,527	-		Synpcc7942_2374	0.79	-0.9
2,442,549	+		Synpcc7942_2374	0.81	-0.5
2,442,557	-		Synpcc7942_2374	0.82	+1.0
2,442,605	-		Synpcc7942_2374	0.85	+1.0
2,442,607	+		Synpcc7942_2374	0.85	+0.7
2,442,617	+		Synpcc7942_2374	0.86	+1.3
2,442,640	+		Synpcc7942_2374	0.88	+0.8
2,442,653	-		Synpcc7942_2374	0.89	+0.1
2,442,664	-		Synpcc7942_2374	0.90	+1.0
2,442,712	+				+0.4
2,442,756	+				-0.8
2,442,756	+				+0.1
2,442,756	+				+0.1
2,442,756	+				+0.2
2,442,756	+				+0.2
2,442,756	+				+0.6
2,442,756	+				+0.8
2,442,764	-				-0.5
2,442,764	-				+0.6
2,442,764	-				-0.8
2,442,764	-				-0.3
2,442,764	-				+0.8
2,442,764	-				-0.2
2,442,807	-				-0.4
2,442,813	-				-0.1