Experiment: bismuth(III) chloride 0.000025 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4905 and Pf6N2E2_4906 overlap by 15 nucleotides Pf6N2E2_4906 and Pf6N2E2_4907 are separated by 149 nucleotides Pf6N2E2_4907 and Pf6N2E2_4908 overlap by 8 nucleotides
Pf6N2E2_4905 - Lhr-like helicases, at 5,659,301 to 5,663,584
_4905
Pf6N2E2_4906 - hypothetical protein, at 5,663,570 to 5,663,692
_4906
Pf6N2E2_4907 - dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133), at 5,663,842 to 5,664,711
_4907
Pf6N2E2_4908 - UDP-glucose 4-epimerase (EC 5.1.3.2), at 5,664,704 to 5,665,633
_4908
Position (kb)
5663
5664
5665 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 5662.877 kb on + strand, within Pf6N2E2_4905 at 5662.877 kb on + strand, within Pf6N2E2_4905 at 5662.877 kb on + strand, within Pf6N2E2_4905 at 5662.877 kb on + strand, within Pf6N2E2_4905 at 5662.877 kb on + strand, within Pf6N2E2_4905 at 5662.878 kb on - strand, within Pf6N2E2_4905 at 5662.878 kb on - strand, within Pf6N2E2_4905 at 5662.878 kb on - strand, within Pf6N2E2_4905 at 5662.878 kb on - strand, within Pf6N2E2_4905 at 5662.878 kb on - strand, within Pf6N2E2_4905 at 5662.927 kb on + strand, within Pf6N2E2_4905 at 5662.927 kb on + strand, within Pf6N2E2_4905 at 5662.927 kb on + strand, within Pf6N2E2_4905 at 5662.927 kb on + strand, within Pf6N2E2_4905 at 5662.927 kb on + strand, within Pf6N2E2_4905 at 5662.927 kb on + strand, within Pf6N2E2_4905 at 5662.927 kb on + strand, within Pf6N2E2_4905 at 5662.927 kb on + strand, within Pf6N2E2_4905 at 5662.927 kb on + strand, within Pf6N2E2_4905 at 5662.927 kb on + strand, within Pf6N2E2_4905 at 5662.928 kb on - strand, within Pf6N2E2_4905 at 5662.928 kb on - strand, within Pf6N2E2_4905 at 5662.928 kb on - strand, within Pf6N2E2_4905 at 5662.928 kb on - strand, within Pf6N2E2_4905 at 5662.928 kb on - strand, within Pf6N2E2_4905 at 5662.928 kb on - strand, within Pf6N2E2_4905 at 5662.928 kb on - strand, within Pf6N2E2_4905 at 5663.151 kb on + strand, within Pf6N2E2_4905 at 5663.151 kb on + strand, within Pf6N2E2_4905 at 5663.152 kb on - strand, within Pf6N2E2_4905 at 5663.152 kb on - strand, within Pf6N2E2_4905 at 5663.358 kb on + strand at 5663.359 kb on - strand at 5663.359 kb on - strand at 5663.359 kb on - strand at 5663.359 kb on - strand at 5663.614 kb on + strand, within Pf6N2E2_4906 at 5663.614 kb on + strand, within Pf6N2E2_4906 at 5663.614 kb on + strand, within Pf6N2E2_4906 at 5663.615 kb on - strand, within Pf6N2E2_4906 at 5663.653 kb on + strand, within Pf6N2E2_4906 at 5663.653 kb on + strand, within Pf6N2E2_4906 at 5663.653 kb on + strand, within Pf6N2E2_4906 at 5663.653 kb on + strand, within Pf6N2E2_4906 at 5663.653 kb on + strand, within Pf6N2E2_4906 at 5663.653 kb on + strand, within Pf6N2E2_4906 at 5663.653 kb on + strand, within Pf6N2E2_4906 at 5663.654 kb on - strand, within Pf6N2E2_4906 at 5663.654 kb on - strand, within Pf6N2E2_4906 at 5663.659 kb on + strand, within Pf6N2E2_4906 at 5663.659 kb on + strand, within Pf6N2E2_4906 at 5663.659 kb on + strand, within Pf6N2E2_4906 at 5663.659 kb on + strand, within Pf6N2E2_4906 at 5663.659 kb on + strand, within Pf6N2E2_4906 at 5663.659 kb on + strand, within Pf6N2E2_4906 at 5663.660 kb on - strand, within Pf6N2E2_4906 at 5663.660 kb on - strand, within Pf6N2E2_4906 at 5663.690 kb on + strand at 5663.690 kb on + strand at 5663.690 kb on + strand at 5663.690 kb on + strand at 5663.691 kb on - strand at 5663.691 kb on - strand at 5663.691 kb on - strand at 5663.691 kb on - strand at 5663.740 kb on + strand at 5663.741 kb on - strand at 5663.741 kb on - strand at 5663.806 kb on + strand at 5663.806 kb on + strand at 5663.807 kb on - strand at 5663.826 kb on + strand at 5663.827 kb on - strand at 5663.827 kb on - strand at 5663.841 kb on + strand at 5663.841 kb on + strand at 5663.841 kb on + strand at 5663.841 kb on + strand at 5663.841 kb on + strand at 5663.841 kb on + strand at 5663.841 kb on + strand at 5663.842 kb on - strand at 5663.842 kb on - strand at 5663.842 kb on - strand at 5663.842 kb on - strand at 5663.842 kb on - strand at 5663.842 kb on - strand at 5663.846 kb on + strand at 5663.847 kb on - strand at 5664.007 kb on + strand, within Pf6N2E2_4907 at 5664.007 kb on + strand, within Pf6N2E2_4907 at 5664.007 kb on + strand, within Pf6N2E2_4907 at 5664.008 kb on - strand, within Pf6N2E2_4907 at 5664.008 kb on - strand, within Pf6N2E2_4907 at 5664.010 kb on + strand, within Pf6N2E2_4907 at 5664.011 kb on - strand, within Pf6N2E2_4907 at 5664.011 kb on - strand, within Pf6N2E2_4907 at 5664.011 kb on - strand, within Pf6N2E2_4907 at 5664.011 kb on - strand, within Pf6N2E2_4907 at 5664.011 kb on - strand, within Pf6N2E2_4907 at 5664.134 kb on - strand, within Pf6N2E2_4907 at 5664.166 kb on + strand, within Pf6N2E2_4907 at 5664.166 kb on + strand, within Pf6N2E2_4907 at 5664.457 kb on + strand, within Pf6N2E2_4907 at 5664.457 kb on + strand, within Pf6N2E2_4907 at 5664.457 kb on + strand, within Pf6N2E2_4907 at 5664.457 kb on + strand, within Pf6N2E2_4907 at 5664.457 kb on + strand, within Pf6N2E2_4907 at 5664.457 kb on + strand, within Pf6N2E2_4907 at 5664.457 kb on + strand, within Pf6N2E2_4907 at 5664.457 kb on + strand, within Pf6N2E2_4907 at 5664.457 kb on + strand, within Pf6N2E2_4907 at 5664.457 kb on + strand, within Pf6N2E2_4907 at 5664.458 kb on - strand, within Pf6N2E2_4907 at 5664.458 kb on - strand, within Pf6N2E2_4907 at 5664.458 kb on - strand, within Pf6N2E2_4907 at 5664.458 kb on - strand, within Pf6N2E2_4907 at 5664.458 kb on - strand, within Pf6N2E2_4907 at 5664.463 kb on + strand, within Pf6N2E2_4907 at 5664.463 kb on + strand, within Pf6N2E2_4907 at 5664.464 kb on - strand, within Pf6N2E2_4907 at 5664.483 kb on + strand, within Pf6N2E2_4907 at 5664.483 kb on + strand, within Pf6N2E2_4907 at 5664.483 kb on + strand, within Pf6N2E2_4907 at 5664.483 kb on + strand, within Pf6N2E2_4907 at 5664.484 kb on - strand, within Pf6N2E2_4907 at 5664.691 kb on - strand at 5664.691 kb on - strand at 5664.691 kb on - strand at 5664.697 kb on + strand at 5664.723 kb on + strand at 5664.723 kb on + strand at 5664.723 kb on + strand at 5664.723 kb on + strand at 5664.723 kb on + strand at 5664.724 kb on - strand at 5665.139 kb on + strand, within Pf6N2E2_4908 at 5665.140 kb on - strand, within Pf6N2E2_4908 at 5665.140 kb on - strand, within Pf6N2E2_4908 at 5665.169 kb on + strand, within Pf6N2E2_4908 at 5665.169 kb on + strand, within Pf6N2E2_4908 at 5665.169 kb on + strand, within Pf6N2E2_4908 at 5665.169 kb on + strand, within Pf6N2E2_4908 at 5665.170 kb on - strand, within Pf6N2E2_4908 at 5665.170 kb on - strand, within Pf6N2E2_4908 at 5665.181 kb on + strand, within Pf6N2E2_4908 at 5665.182 kb on - strand, within Pf6N2E2_4908 at 5665.232 kb on + strand, within Pf6N2E2_4908 at 5665.232 kb on + strand, within Pf6N2E2_4908 at 5665.232 kb on + strand, within Pf6N2E2_4908 at 5665.232 kb on + strand, within Pf6N2E2_4908 at 5665.232 kb on + strand, within Pf6N2E2_4908 at 5665.233 kb on - strand, within Pf6N2E2_4908 at 5665.355 kb on + strand, within Pf6N2E2_4908 at 5665.508 kb on + strand, within Pf6N2E2_4908 at 5665.509 kb on - strand, within Pf6N2E2_4908
Per-strain Table
Position Strand Gene LocusTag Fraction bismuth(III) chloride 0.000025 M remove 5,662,877 + Pf6N2E2_4905 0.83 -0.7 5,662,877 + Pf6N2E2_4905 0.83 +0.5 5,662,877 + Pf6N2E2_4905 0.83 +0.2 5,662,877 + Pf6N2E2_4905 0.83 +0.4 5,662,877 + Pf6N2E2_4905 0.83 +0.8 5,662,878 - Pf6N2E2_4905 0.83 +0.7 5,662,878 - Pf6N2E2_4905 0.83 +0.1 5,662,878 - Pf6N2E2_4905 0.83 -0.1 5,662,878 - Pf6N2E2_4905 0.83 +0.7 5,662,878 - Pf6N2E2_4905 0.83 -0.9 5,662,927 + Pf6N2E2_4905 0.85 +0.2 5,662,927 + Pf6N2E2_4905 0.85 -0.3 5,662,927 + Pf6N2E2_4905 0.85 -0.0 5,662,927 + Pf6N2E2_4905 0.85 -0.7 5,662,927 + Pf6N2E2_4905 0.85 -0.3 5,662,927 + Pf6N2E2_4905 0.85 -0.1 5,662,927 + Pf6N2E2_4905 0.85 +1.5 5,662,927 + Pf6N2E2_4905 0.85 -0.6 5,662,927 + Pf6N2E2_4905 0.85 -0.6 5,662,927 + Pf6N2E2_4905 0.85 +0.0 5,662,928 - Pf6N2E2_4905 0.85 -0.7 5,662,928 - Pf6N2E2_4905 0.85 -0.1 5,662,928 - Pf6N2E2_4905 0.85 -1.1 5,662,928 - Pf6N2E2_4905 0.85 +0.0 5,662,928 - Pf6N2E2_4905 0.85 +0.8 5,662,928 - Pf6N2E2_4905 0.85 -0.2 5,662,928 - Pf6N2E2_4905 0.85 -0.5 5,663,151 + Pf6N2E2_4905 0.90 +0.4 5,663,151 + Pf6N2E2_4905 0.90 -0.7 5,663,152 - Pf6N2E2_4905 0.90 +0.5 5,663,152 - Pf6N2E2_4905 0.90 +0.1 5,663,358 + -1.1 5,663,359 - -0.1 5,663,359 - +1.7 5,663,359 - -0.1 5,663,359 - +0.5 5,663,614 + Pf6N2E2_4906 0.36 +1.3 5,663,614 + Pf6N2E2_4906 0.36 +0.1 5,663,614 + Pf6N2E2_4906 0.36 -0.4 5,663,615 - Pf6N2E2_4906 0.37 -0.5 5,663,653 + Pf6N2E2_4906 0.67 +0.0 5,663,653 + Pf6N2E2_4906 0.67 +0.2 5,663,653 + Pf6N2E2_4906 0.67 +0.3 5,663,653 + Pf6N2E2_4906 0.67 -0.0 5,663,653 + Pf6N2E2_4906 0.67 +0.1 5,663,653 + Pf6N2E2_4906 0.67 +0.2 5,663,653 + Pf6N2E2_4906 0.67 -0.1 5,663,654 - Pf6N2E2_4906 0.68 -0.8 5,663,654 - Pf6N2E2_4906 0.68 +0.8 5,663,659 + Pf6N2E2_4906 0.72 +0.6 5,663,659 + Pf6N2E2_4906 0.72 +1.1 5,663,659 + Pf6N2E2_4906 0.72 -0.5 5,663,659 + Pf6N2E2_4906 0.72 +0.0 5,663,659 + Pf6N2E2_4906 0.72 +0.3 5,663,659 + Pf6N2E2_4906 0.72 +0.2 5,663,660 - Pf6N2E2_4906 0.73 -0.4 5,663,660 - Pf6N2E2_4906 0.73 +1.1 5,663,690 + +0.0 5,663,690 + +0.1 5,663,690 + -0.0 5,663,690 + -0.4 5,663,691 - -1.0 5,663,691 - +0.3 5,663,691 - +0.2 5,663,691 - +0.4 5,663,740 + +0.2 5,663,741 - -0.6 5,663,741 - -0.7 5,663,806 + -0.7 5,663,806 + +0.4 5,663,807 - -0.0 5,663,826 + +0.7 5,663,827 - -0.0 5,663,827 - +0.2 5,663,841 + +0.2 5,663,841 + -0.7 5,663,841 + -0.2 5,663,841 + +0.3 5,663,841 + +0.5 5,663,841 + +0.2 5,663,841 + -0.3 5,663,842 - -3.1 5,663,842 - +0.3 5,663,842 - -1.3 5,663,842 - -1.9 5,663,842 - -1.0 5,663,842 - -1.1 5,663,846 + -1.3 5,663,847 - +0.6 5,664,007 + Pf6N2E2_4907 0.19 +0.6 5,664,007 + Pf6N2E2_4907 0.19 -0.4 5,664,007 + Pf6N2E2_4907 0.19 +0.5 5,664,008 - Pf6N2E2_4907 0.19 -1.8 5,664,008 - Pf6N2E2_4907 0.19 -0.8 5,664,010 + Pf6N2E2_4907 0.19 +0.1 5,664,011 - Pf6N2E2_4907 0.19 -0.3 5,664,011 - Pf6N2E2_4907 0.19 -2.5 5,664,011 - Pf6N2E2_4907 0.19 -2.3 5,664,011 - Pf6N2E2_4907 0.19 -1.2 5,664,011 - Pf6N2E2_4907 0.19 -0.5 5,664,134 - Pf6N2E2_4907 0.34 -0.3 5,664,166 + Pf6N2E2_4907 0.37 -0.3 5,664,166 + Pf6N2E2_4907 0.37 -0.1 5,664,457 + Pf6N2E2_4907 0.71 -0.7 5,664,457 + Pf6N2E2_4907 0.71 -0.3 5,664,457 + Pf6N2E2_4907 0.71 +0.5 5,664,457 + Pf6N2E2_4907 0.71 -0.3 5,664,457 + Pf6N2E2_4907 0.71 +0.7 5,664,457 + Pf6N2E2_4907 0.71 -0.1 5,664,457 + Pf6N2E2_4907 0.71 +0.2 5,664,457 + Pf6N2E2_4907 0.71 -0.7 5,664,457 + Pf6N2E2_4907 0.71 -0.4 5,664,457 + Pf6N2E2_4907 0.71 +0.2 5,664,458 - Pf6N2E2_4907 0.71 +0.4 5,664,458 - Pf6N2E2_4907 0.71 +0.5 5,664,458 - Pf6N2E2_4907 0.71 +0.8 5,664,458 - Pf6N2E2_4907 0.71 -0.8 5,664,458 - Pf6N2E2_4907 0.71 -0.7 5,664,463 + Pf6N2E2_4907 0.71 -0.5 5,664,463 + Pf6N2E2_4907 0.71 +0.5 5,664,464 - Pf6N2E2_4907 0.71 -2.7 5,664,483 + Pf6N2E2_4907 0.74 -0.2 5,664,483 + Pf6N2E2_4907 0.74 +0.0 5,664,483 + Pf6N2E2_4907 0.74 -1.2 5,664,483 + Pf6N2E2_4907 0.74 +0.2 5,664,484 - Pf6N2E2_4907 0.74 -1.0 5,664,691 - -1.7 5,664,691 - -2.2 5,664,691 - -0.8 5,664,697 + -0.7 5,664,723 + -3.2 5,664,723 + -2.9 5,664,723 + -1.2 5,664,723 + -3.1 5,664,723 + -3.8 5,664,724 - -1.7 5,665,139 + Pf6N2E2_4908 0.47 -1.9 5,665,140 - Pf6N2E2_4908 0.47 -1.5 5,665,140 - Pf6N2E2_4908 0.47 -2.2 5,665,169 + Pf6N2E2_4908 0.50 -1.5 5,665,169 + Pf6N2E2_4908 0.50 -2.6 5,665,169 + Pf6N2E2_4908 0.50 -1.1 5,665,169 + Pf6N2E2_4908 0.50 -2.3 5,665,170 - Pf6N2E2_4908 0.50 -3.5 5,665,170 - Pf6N2E2_4908 0.50 -3.4 5,665,181 + Pf6N2E2_4908 0.51 -2.1 5,665,182 - Pf6N2E2_4908 0.51 -3.0 5,665,232 + Pf6N2E2_4908 0.57 -3.1 5,665,232 + Pf6N2E2_4908 0.57 -1.4 5,665,232 + Pf6N2E2_4908 0.57 -2.3 5,665,232 + Pf6N2E2_4908 0.57 -2.1 5,665,232 + Pf6N2E2_4908 0.57 -1.9 5,665,233 - Pf6N2E2_4908 0.57 -1.2 5,665,355 + Pf6N2E2_4908 0.70 -3.3 5,665,508 + Pf6N2E2_4908 0.86 -1.7 5,665,509 - Pf6N2E2_4908 0.87 -2.1
Or see this region's nucleotide sequence