Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06412 and H281DRAFT_06413 overlap by 29 nucleotides H281DRAFT_06413 and H281DRAFT_06414 overlap by 4 nucleotides
H281DRAFT_06412: H281DRAFT_06412 - Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II, at 10,670 to 12,133
_06412
H281DRAFT_06413: H281DRAFT_06413 - adenylyl-sulfate kinase, at 12,105 to 13,370
_06413
H281DRAFT_06414: H281DRAFT_06414 - EamA domain-containing membrane protein RarD, at 13,367 to 14,239
_06414
Position (kb) 12
13
14 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 11.128 kb on - strand, within H281DRAFT_06412 at 11.210 kb on + strand, within H281DRAFT_06412 at 11.210 kb on + strand, within H281DRAFT_06412 at 11.211 kb on - strand, within H281DRAFT_06412 at 11.307 kb on + strand, within H281DRAFT_06412 at 11.335 kb on - strand, within H281DRAFT_06412 at 11.335 kb on - strand, within H281DRAFT_06412 at 11.377 kb on + strand, within H281DRAFT_06412 at 11.394 kb on - strand, within H281DRAFT_06412 at 11.397 kb on + strand, within H281DRAFT_06412 at 11.398 kb on - strand, within H281DRAFT_06412 at 11.484 kb on - strand, within H281DRAFT_06412 at 11.491 kb on + strand, within H281DRAFT_06412 at 11.491 kb on + strand at 11.492 kb on - strand, within H281DRAFT_06412 at 11.492 kb on - strand, within H281DRAFT_06412 at 11.492 kb on - strand, within H281DRAFT_06412 at 11.492 kb on - strand, within H281DRAFT_06412 at 11.494 kb on - strand, within H281DRAFT_06412 at 11.515 kb on - strand, within H281DRAFT_06412 at 11.537 kb on - strand, within H281DRAFT_06412 at 11.742 kb on + strand, within H281DRAFT_06412 at 11.742 kb on + strand, within H281DRAFT_06412 at 11.742 kb on + strand, within H281DRAFT_06412 at 11.742 kb on + strand, within H281DRAFT_06412 at 11.809 kb on - strand, within H281DRAFT_06412 at 11.809 kb on - strand, within H281DRAFT_06412 at 11.922 kb on + strand, within H281DRAFT_06412 at 11.938 kb on + strand at 11.938 kb on + strand, within H281DRAFT_06412 at 11.938 kb on + strand, within H281DRAFT_06412 at 11.939 kb on - strand, within H281DRAFT_06412 at 11.939 kb on - strand, within H281DRAFT_06412 at 12.097 kb on + strand at 12.098 kb on - strand at 12.149 kb on - strand at 12.152 kb on - strand at 12.152 kb on - strand at 12.152 kb on - strand at 12.152 kb on - strand at 12.152 kb on - strand at 12.248 kb on - strand, within H281DRAFT_06413 at 12.375 kb on - strand, within H281DRAFT_06413 at 12.467 kb on - strand, within H281DRAFT_06413 at 12.605 kb on - strand, within H281DRAFT_06413 at 12.605 kb on - strand, within H281DRAFT_06413 at 12.738 kb on - strand, within H281DRAFT_06413 at 12.812 kb on - strand, within H281DRAFT_06413 at 12.887 kb on + strand, within H281DRAFT_06413 at 12.913 kb on - strand, within H281DRAFT_06413 at 13.011 kb on - strand, within H281DRAFT_06413 at 13.025 kb on + strand, within H281DRAFT_06413 at 13.069 kb on + strand, within H281DRAFT_06413 at 13.070 kb on - strand, within H281DRAFT_06413 at 13.071 kb on + strand, within H281DRAFT_06413 at 13.071 kb on + strand, within H281DRAFT_06413 at 13.071 kb on + strand, within H281DRAFT_06413 at 13.071 kb on + strand, within H281DRAFT_06413 at 13.072 kb on - strand, within H281DRAFT_06413 at 13.072 kb on - strand, within H281DRAFT_06413 at 13.072 kb on - strand, within H281DRAFT_06413 at 13.072 kb on - strand, within H281DRAFT_06413 at 13.122 kb on + strand, within H281DRAFT_06413 at 13.130 kb on - strand, within H281DRAFT_06413 at 13.133 kb on + strand, within H281DRAFT_06413 at 13.133 kb on + strand, within H281DRAFT_06413 at 13.134 kb on - strand, within H281DRAFT_06413 at 13.148 kb on + strand, within H281DRAFT_06413 at 13.177 kb on - strand, within H281DRAFT_06413 at 13.257 kb on + strand at 13.257 kb on + strand at 13.258 kb on - strand at 13.258 kb on - strand at 13.260 kb on + strand at 13.260 kb on + strand at 13.265 kb on - strand at 13.361 kb on + strand at 13.361 kb on + strand at 13.361 kb on + strand at 13.478 kb on - strand, within H281DRAFT_06414 at 13.624 kb on + strand, within H281DRAFT_06414 at 13.640 kb on - strand, within H281DRAFT_06414 at 13.711 kb on + strand, within H281DRAFT_06414 at 13.815 kb on + strand, within H281DRAFT_06414 at 13.815 kb on + strand, within H281DRAFT_06414 at 13.833 kb on + strand, within H281DRAFT_06414 at 13.833 kb on + strand, within H281DRAFT_06414 at 13.833 kb on + strand, within H281DRAFT_06414 at 13.866 kb on + strand, within H281DRAFT_06414 at 13.866 kb on + strand, within H281DRAFT_06414 at 13.866 kb on + strand, within H281DRAFT_06414 at 13.866 kb on + strand, within H281DRAFT_06414 at 13.868 kb on + strand, within H281DRAFT_06414 at 13.934 kb on + strand, within H281DRAFT_06414 at 13.935 kb on - strand, within H281DRAFT_06414 at 13.937 kb on - strand, within H281DRAFT_06414 at 13.937 kb on - strand, within H281DRAFT_06414 at 13.937 kb on - strand, within H281DRAFT_06414 at 13.937 kb on - strand, within H281DRAFT_06414 at 13.969 kb on + strand, within H281DRAFT_06414 at 13.970 kb on - strand, within H281DRAFT_06414 at 14.054 kb on + strand, within H281DRAFT_06414 at 14.054 kb on + strand, within H281DRAFT_06414 at 14.054 kb on + strand, within H281DRAFT_06414 at 14.054 kb on + strand, within H281DRAFT_06414 at 14.055 kb on - strand, within H281DRAFT_06414 at 14.055 kb on - strand, within H281DRAFT_06414 at 14.063 kb on - strand, within H281DRAFT_06414 at 14.111 kb on + strand, within H281DRAFT_06414 at 14.113 kb on + strand, within H281DRAFT_06414 at 14.113 kb on + strand, within H281DRAFT_06414 at 14.114 kb on - strand, within H281DRAFT_06414 at 14.124 kb on + strand, within H281DRAFT_06414 at 14.196 kb on + strand at 14.196 kb on + strand at 14.197 kb on - strand at 14.255 kb on - strand at 14.255 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 11,128 - H281DRAFT_06412 0.31 -1.7 11,210 + H281DRAFT_06412 0.37 +2.2 11,210 + H281DRAFT_06412 0.37 +0.3 11,211 - H281DRAFT_06412 0.37 -0.3 11,307 + H281DRAFT_06412 0.44 -0.3 11,335 - H281DRAFT_06412 0.45 +0.7 11,335 - H281DRAFT_06412 0.45 +0.5 11,377 + H281DRAFT_06412 0.48 +0.1 11,394 - H281DRAFT_06412 0.49 +0.2 11,397 + H281DRAFT_06412 0.50 +1.2 11,398 - H281DRAFT_06412 0.50 +0.9 11,484 - H281DRAFT_06412 0.56 +0.6 11,491 + H281DRAFT_06412 0.56 +0.2 11,491 + +0.5 11,492 - H281DRAFT_06412 0.56 +0.0 11,492 - H281DRAFT_06412 0.56 -0.0 11,492 - H281DRAFT_06412 0.56 -1.0 11,492 - H281DRAFT_06412 0.56 +0.3 11,494 - H281DRAFT_06412 0.56 +1.7 11,515 - H281DRAFT_06412 0.58 -0.8 11,537 - H281DRAFT_06412 0.59 +0.9 11,742 + H281DRAFT_06412 0.73 -1.5 11,742 + H281DRAFT_06412 0.73 +0.1 11,742 + H281DRAFT_06412 0.73 +0.5 11,742 + H281DRAFT_06412 0.73 +0.5 11,809 - H281DRAFT_06412 0.78 +1.0 11,809 - H281DRAFT_06412 0.78 +1.3 11,922 + H281DRAFT_06412 0.86 +0.3 11,938 + +0.5 11,938 + H281DRAFT_06412 0.87 +0.5 11,938 + H281DRAFT_06412 0.87 -0.3 11,939 - H281DRAFT_06412 0.87 +0.2 11,939 - H281DRAFT_06412 0.87 -0.6 12,097 + +0.1 12,098 - +0.5 12,149 - +0.1 12,152 - -0.2 12,152 - +0.8 12,152 - -0.7 12,152 - -0.2 12,152 - +0.5 12,248 - H281DRAFT_06413 0.11 +0.0 12,375 - H281DRAFT_06413 0.21 +0.2 12,467 - H281DRAFT_06413 0.29 +0.2 12,605 - H281DRAFT_06413 0.39 +0.9 12,605 - H281DRAFT_06413 0.39 +1.1 12,738 - H281DRAFT_06413 0.50 +0.6 12,812 - H281DRAFT_06413 0.56 +0.1 12,887 + H281DRAFT_06413 0.62 +0.8 12,913 - H281DRAFT_06413 0.64 +0.2 13,011 - H281DRAFT_06413 0.72 +0.5 13,025 + H281DRAFT_06413 0.73 -0.8 13,069 + H281DRAFT_06413 0.76 +1.1 13,070 - H281DRAFT_06413 0.76 +0.0 13,071 + H281DRAFT_06413 0.76 -0.4 13,071 + H281DRAFT_06413 0.76 -0.5 13,071 + H281DRAFT_06413 0.76 -1.4 13,071 + H281DRAFT_06413 0.76 +1.1 13,072 - H281DRAFT_06413 0.76 +0.3 13,072 - H281DRAFT_06413 0.76 +0.2 13,072 - H281DRAFT_06413 0.76 -0.8 13,072 - H281DRAFT_06413 0.76 -2.6 13,122 + H281DRAFT_06413 0.80 -0.5 13,130 - H281DRAFT_06413 0.81 +0.0 13,133 + H281DRAFT_06413 0.81 +0.7 13,133 + H281DRAFT_06413 0.81 -0.5 13,134 - H281DRAFT_06413 0.81 +0.2 13,148 + H281DRAFT_06413 0.82 -0.1 13,177 - H281DRAFT_06413 0.85 +0.5 13,257 + -0.4 13,257 + -1.2 13,258 - -0.0 13,258 - -0.0 13,260 + +0.7 13,260 + +0.1 13,265 - -0.0 13,361 + +0.6 13,361 + +0.1 13,361 + +0.3 13,478 - H281DRAFT_06414 0.13 +0.5 13,624 + H281DRAFT_06414 0.29 +0.1 13,640 - H281DRAFT_06414 0.31 -3.3 13,711 + H281DRAFT_06414 0.39 -0.3 13,815 + H281DRAFT_06414 0.51 +0.3 13,815 + H281DRAFT_06414 0.51 -0.3 13,833 + H281DRAFT_06414 0.53 +0.1 13,833 + H281DRAFT_06414 0.53 -0.3 13,833 + H281DRAFT_06414 0.53 +0.3 13,866 + H281DRAFT_06414 0.57 +0.0 13,866 + H281DRAFT_06414 0.57 +0.3 13,866 + H281DRAFT_06414 0.57 +0.7 13,866 + H281DRAFT_06414 0.57 -2.5 13,868 + H281DRAFT_06414 0.57 +0.7 13,934 + H281DRAFT_06414 0.65 -0.2 13,935 - H281DRAFT_06414 0.65 -0.5 13,937 - H281DRAFT_06414 0.65 +0.5 13,937 - H281DRAFT_06414 0.65 -1.0 13,937 - H281DRAFT_06414 0.65 +0.8 13,937 - H281DRAFT_06414 0.65 +0.2 13,969 + H281DRAFT_06414 0.69 +0.6 13,970 - H281DRAFT_06414 0.69 -0.0 14,054 + H281DRAFT_06414 0.79 +0.3 14,054 + H281DRAFT_06414 0.79 +0.0 14,054 + H281DRAFT_06414 0.79 -1.2 14,054 + H281DRAFT_06414 0.79 +0.3 14,055 - H281DRAFT_06414 0.79 -0.0 14,055 - H281DRAFT_06414 0.79 -0.0 14,063 - H281DRAFT_06414 0.80 -0.3 14,111 + H281DRAFT_06414 0.85 +0.2 14,113 + H281DRAFT_06414 0.85 -0.0 14,113 + H281DRAFT_06414 0.85 +0.1 14,114 - H281DRAFT_06414 0.86 +0.2 14,124 + H281DRAFT_06414 0.87 -0.1 14,196 + +0.6 14,196 + +0.7 14,197 - -0.3 14,255 - -0.2 14,255 - +1.1
Or see this region's nucleotide sequence