Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04622 and H281DRAFT_04623 are separated by 356 nucleotides H281DRAFT_04623 and H281DRAFT_04624 are separated by 117 nucleotides
H281DRAFT_04622: H281DRAFT_04622 - putative cardiolipin synthase, at 16,070 to 17,329
_04622
H281DRAFT_04623: H281DRAFT_04623 - transcriptional regulator, TetR family, at 17,686 to 18,285
_04623
H281DRAFT_04624: H281DRAFT_04624 - hypothetical protein, at 18,403 to 20,190
_04624
Position (kb) 17
18
19 Strain fitness (log2 ratio) -2
-1
0
1 at 16.817 kb on + strand, within H281DRAFT_04622 at 16.818 kb on - strand, within H281DRAFT_04622 at 16.868 kb on + strand, within H281DRAFT_04622 at 16.869 kb on - strand, within H281DRAFT_04622 at 16.907 kb on + strand, within H281DRAFT_04622 at 16.907 kb on + strand, within H281DRAFT_04622 at 16.907 kb on + strand, within H281DRAFT_04622 at 16.907 kb on + strand, within H281DRAFT_04622 at 16.908 kb on - strand, within H281DRAFT_04622 at 16.992 kb on - strand, within H281DRAFT_04622 at 17.128 kb on + strand, within H281DRAFT_04622 at 17.128 kb on + strand, within H281DRAFT_04622 at 17.137 kb on + strand, within H281DRAFT_04622 at 17.137 kb on + strand, within H281DRAFT_04622 at 17.231 kb on + strand at 17.232 kb on - strand at 17.232 kb on - strand at 17.232 kb on - strand at 17.276 kb on + strand at 17.286 kb on - strand at 17.435 kb on + strand at 17.583 kb on - strand at 17.599 kb on + strand at 17.599 kb on + strand at 17.599 kb on + strand at 17.600 kb on - strand at 17.600 kb on - strand at 17.669 kb on + strand at 17.669 kb on + strand at 17.669 kb on + strand at 17.670 kb on - strand at 17.670 kb on - strand at 17.670 kb on - strand at 17.670 kb on - strand at 17.670 kb on - strand at 17.677 kb on + strand at 17.866 kb on + strand, within H281DRAFT_04623 at 17.866 kb on + strand, within H281DRAFT_04623 at 17.866 kb on + strand, within H281DRAFT_04623 at 17.867 kb on - strand, within H281DRAFT_04623 at 17.867 kb on - strand, within H281DRAFT_04623 at 17.995 kb on + strand, within H281DRAFT_04623 at 17.996 kb on - strand, within H281DRAFT_04623 at 18.017 kb on - strand, within H281DRAFT_04623 at 18.413 kb on - strand at 18.604 kb on + strand, within H281DRAFT_04624 at 18.604 kb on + strand, within H281DRAFT_04624 at 18.604 kb on + strand, within H281DRAFT_04624 at 18.605 kb on - strand, within H281DRAFT_04624 at 18.653 kb on - strand, within H281DRAFT_04624 at 18.653 kb on - strand, within H281DRAFT_04624 at 18.661 kb on + strand, within H281DRAFT_04624 at 18.661 kb on + strand, within H281DRAFT_04624 at 18.661 kb on + strand, within H281DRAFT_04624 at 18.745 kb on + strand, within H281DRAFT_04624 at 18.746 kb on - strand, within H281DRAFT_04624 at 18.785 kb on - strand, within H281DRAFT_04624 at 18.785 kb on - strand, within H281DRAFT_04624 at 18.878 kb on + strand, within H281DRAFT_04624 at 18.879 kb on - strand, within H281DRAFT_04624 at 18.970 kb on + strand, within H281DRAFT_04624 at 19.214 kb on + strand, within H281DRAFT_04624 at 19.214 kb on + strand, within H281DRAFT_04624 at 19.215 kb on - strand, within H281DRAFT_04624
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 16,817 + H281DRAFT_04622 0.59 +0.5 16,818 - H281DRAFT_04622 0.59 +0.1 16,868 + H281DRAFT_04622 0.63 -0.7 16,869 - H281DRAFT_04622 0.63 +0.7 16,907 + H281DRAFT_04622 0.66 -2.1 16,907 + H281DRAFT_04622 0.66 -0.7 16,907 + H281DRAFT_04622 0.66 -1.1 16,907 + H281DRAFT_04622 0.66 -1.0 16,908 - H281DRAFT_04622 0.67 +0.4 16,992 - H281DRAFT_04622 0.73 -0.4 17,128 + H281DRAFT_04622 0.84 -0.8 17,128 + H281DRAFT_04622 0.84 +0.3 17,137 + H281DRAFT_04622 0.85 +0.1 17,137 + H281DRAFT_04622 0.85 -0.7 17,231 + -0.9 17,232 - -0.3 17,232 - -0.7 17,232 - -0.8 17,276 + +0.5 17,286 - +0.5 17,435 + -0.6 17,583 - -0.6 17,599 + -1.0 17,599 + -0.2 17,599 + +1.5 17,600 - +0.3 17,600 - -0.4 17,669 + -0.4 17,669 + +0.1 17,669 + -1.5 17,670 - -0.4 17,670 - -0.8 17,670 - +0.2 17,670 - +0.5 17,670 - +1.0 17,677 + +0.4 17,866 + H281DRAFT_04623 0.30 -1.6 17,866 + H281DRAFT_04623 0.30 -0.4 17,866 + H281DRAFT_04623 0.30 -1.4 17,867 - H281DRAFT_04623 0.30 -2.1 17,867 - H281DRAFT_04623 0.30 -2.3 17,995 + H281DRAFT_04623 0.52 -1.6 17,996 - H281DRAFT_04623 0.52 -0.5 18,017 - H281DRAFT_04623 0.55 -1.7 18,413 - +0.5 18,604 + H281DRAFT_04624 0.11 -0.1 18,604 + H281DRAFT_04624 0.11 +0.9 18,604 + H281DRAFT_04624 0.11 -0.5 18,605 - H281DRAFT_04624 0.11 -0.1 18,653 - H281DRAFT_04624 0.14 +0.9 18,653 - H281DRAFT_04624 0.14 +0.1 18,661 + H281DRAFT_04624 0.14 -0.9 18,661 + H281DRAFT_04624 0.14 +0.7 18,661 + H281DRAFT_04624 0.14 +1.1 18,745 + H281DRAFT_04624 0.19 -0.9 18,746 - H281DRAFT_04624 0.19 +0.0 18,785 - H281DRAFT_04624 0.21 -0.6 18,785 - H281DRAFT_04624 0.21 -0.1 18,878 + H281DRAFT_04624 0.27 -0.3 18,879 - H281DRAFT_04624 0.27 +0.5 18,970 + H281DRAFT_04624 0.32 -0.2 19,214 + H281DRAFT_04624 0.45 -1.0 19,214 + H281DRAFT_04624 0.45 -0.3 19,215 - H281DRAFT_04624 0.45 -0.3
Or see this region's nucleotide sequence