Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03609 and H281DRAFT_03610 overlap by 4 nucleotides H281DRAFT_03610 and H281DRAFT_03611 are separated by 3 nucleotides H281DRAFT_03611 and H281DRAFT_03612 are separated by 46 nucleotides
H281DRAFT_03609: H281DRAFT_03609 - squalene-associated FAD-dependent desaturase, at 117,671 to 118,921
_03609
H281DRAFT_03610: H281DRAFT_03610 - squalene-hopene/tetraprenyl-beta-curcumene cyclase, at 118,918 to 120,978
_03610
H281DRAFT_03611: H281DRAFT_03611 - hopanoid-associated phosphorylase, at 120,982 to 121,710
_03611
H281DRAFT_03612: H281DRAFT_03612 - phospholipid-binding lipoprotein MlaA, at 121,757 to 122,827
_03612
Position (kb) 118
119
120
121 Strain fitness (log2 ratio) -2
-1
0
1
2 at 118.031 kb on + strand, within H281DRAFT_03609 at 118.610 kb on + strand, within H281DRAFT_03609 at 118.802 kb on - strand at 118.888 kb on + strand at 118.929 kb on - strand at 119.182 kb on + strand, within H281DRAFT_03610 at 119.314 kb on + strand, within H281DRAFT_03610 at 119.470 kb on - strand at 119.571 kb on - strand at 119.860 kb on + strand, within H281DRAFT_03610 at 119.861 kb on - strand, within H281DRAFT_03610 at 120.160 kb on + strand, within H281DRAFT_03610 at 120.331 kb on + strand, within H281DRAFT_03610 at 120.332 kb on - strand, within H281DRAFT_03610 at 120.334 kb on + strand, within H281DRAFT_03610 at 120.476 kb on - strand, within H281DRAFT_03610 at 120.538 kb on + strand, within H281DRAFT_03610 at 120.539 kb on - strand, within H281DRAFT_03610 at 120.797 kb on - strand at 120.976 kb on + strand at 120.977 kb on - strand at 120.977 kb on - strand at 121.100 kb on - strand, within H281DRAFT_03611 at 121.206 kb on - strand, within H281DRAFT_03611 at 121.510 kb on - strand at 121.510 kb on - strand, within H281DRAFT_03611 at 121.759 kb on - strand at 121.759 kb on - strand at 121.759 kb on - strand at 121.759 kb on - strand at 121.793 kb on - strand at 121.793 kb on - strand at 121.888 kb on + strand, within H281DRAFT_03612
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 118,031 + H281DRAFT_03609 0.29 -0.9 118,610 + H281DRAFT_03609 0.75 -0.0 118,802 - -1.3 118,888 + -0.8 118,929 - +0.4 119,182 + H281DRAFT_03610 0.13 +0.1 119,314 + H281DRAFT_03610 0.19 -1.6 119,470 - +0.4 119,571 - -0.6 119,860 + H281DRAFT_03610 0.46 -0.2 119,861 - H281DRAFT_03610 0.46 +1.1 120,160 + H281DRAFT_03610 0.60 -1.7 120,331 + H281DRAFT_03610 0.69 -1.3 120,332 - H281DRAFT_03610 0.69 +0.8 120,334 + H281DRAFT_03610 0.69 +1.0 120,476 - H281DRAFT_03610 0.76 -2.0 120,538 + H281DRAFT_03610 0.79 -1.5 120,539 - H281DRAFT_03610 0.79 -0.2 120,797 - -1.5 120,976 + +0.4 120,977 - -0.7 120,977 - -1.2 121,100 - H281DRAFT_03611 0.16 -1.0 121,206 - H281DRAFT_03611 0.31 +1.6 121,510 - +2.0 121,510 - H281DRAFT_03611 0.72 +2.0 121,759 - -0.8 121,759 - -1.2 121,759 - +2.0 121,759 - -0.3 121,793 - -0.4 121,793 - +0.4 121,888 + H281DRAFT_03612 0.12 -0.4
Or see this region's nucleotide sequence