Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01917 and H281DRAFT_01918 are separated by 95 nucleotides H281DRAFT_01918 and H281DRAFT_01919 are separated by 52 nucleotides H281DRAFT_01919 and H281DRAFT_01920 are separated by 58 nucleotides H281DRAFT_01920 and H281DRAFT_01921 are separated by 75 nucleotides
H281DRAFT_01917: H281DRAFT_01917 - formyltetrahydrofolate deformylase, at 34,958 to 35,827
_01917
H281DRAFT_01918: H281DRAFT_01918 - Isopentenyldiphosphate isomerase, at 35,923 to 36,774
_01918
H281DRAFT_01919: H281DRAFT_01919 - Threonine/homoserine/homoserine lactone efflux protein, at 36,827 to 37,441
_01919
H281DRAFT_01920: H281DRAFT_01920 - adenine phosphoribosyltransferase, at 37,500 to 38,066
_01920
H281DRAFT_01921: H281DRAFT_01921 - Kef-type potassium/proton antiporter, CPA2 family, at 38,142 to 40,145
_01921
Position (kb) 36
37
38 Strain fitness (log2 ratio) -2
-1
0
1
2 at 35.876 kb on + strand at 35.876 kb on + strand at 35.876 kb on + strand at 35.877 kb on - strand at 35.925 kb on - strand at 36.146 kb on + strand, within H281DRAFT_01918 at 36.150 kb on + strand, within H281DRAFT_01918 at 36.150 kb on + strand, within H281DRAFT_01918 at 36.150 kb on + strand, within H281DRAFT_01918 at 36.197 kb on + strand, within H281DRAFT_01918 at 36.197 kb on + strand, within H281DRAFT_01918 at 36.197 kb on + strand, within H281DRAFT_01918 at 36.197 kb on + strand, within H281DRAFT_01918 at 36.197 kb on + strand, within H281DRAFT_01918 at 36.198 kb on - strand, within H281DRAFT_01918 at 36.198 kb on - strand, within H281DRAFT_01918 at 36.398 kb on + strand, within H281DRAFT_01918 at 36.398 kb on + strand, within H281DRAFT_01918 at 36.399 kb on - strand, within H281DRAFT_01918 at 36.404 kb on - strand, within H281DRAFT_01918 at 36.470 kb on + strand, within H281DRAFT_01918 at 36.471 kb on - strand, within H281DRAFT_01918 at 36.471 kb on - strand, within H281DRAFT_01918 at 36.509 kb on + strand, within H281DRAFT_01918 at 36.510 kb on - strand, within H281DRAFT_01918 at 36.510 kb on - strand, within H281DRAFT_01918 at 36.643 kb on + strand, within H281DRAFT_01918 at 37.058 kb on + strand, within H281DRAFT_01919 at 37.203 kb on + strand, within H281DRAFT_01919 at 37.203 kb on + strand, within H281DRAFT_01919 at 37.203 kb on + strand, within H281DRAFT_01919 at 37.448 kb on + strand at 37.448 kb on + strand at 37.448 kb on + strand at 37.449 kb on - strand at 37.529 kb on - strand at 37.774 kb on + strand, within H281DRAFT_01920 at 37.774 kb on + strand, within H281DRAFT_01920 at 37.775 kb on - strand, within H281DRAFT_01920 at 37.793 kb on + strand, within H281DRAFT_01920 at 37.794 kb on - strand, within H281DRAFT_01920 at 37.826 kb on - strand, within H281DRAFT_01920 at 37.826 kb on - strand, within H281DRAFT_01920 at 37.826 kb on - strand, within H281DRAFT_01920 at 37.877 kb on - strand, within H281DRAFT_01920 at 37.896 kb on - strand, within H281DRAFT_01920 at 37.897 kb on + strand, within H281DRAFT_01920 at 37.897 kb on + strand, within H281DRAFT_01920 at 37.898 kb on - strand, within H281DRAFT_01920 at 38.010 kb on - strand at 38.023 kb on + strand at 38.024 kb on - strand at 38.024 kb on - strand at 38.024 kb on - strand at 38.143 kb on + strand at 38.321 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 35,876 + +0.2 35,876 + +1.1 35,876 + +0.3 35,877 - +0.6 35,925 - +0.8 36,146 + H281DRAFT_01918 0.26 -0.0 36,150 + H281DRAFT_01918 0.27 -0.3 36,150 + H281DRAFT_01918 0.27 +0.9 36,150 + H281DRAFT_01918 0.27 -0.5 36,197 + H281DRAFT_01918 0.32 +0.7 36,197 + H281DRAFT_01918 0.32 +0.9 36,197 + H281DRAFT_01918 0.32 -0.7 36,197 + H281DRAFT_01918 0.32 +0.0 36,197 + H281DRAFT_01918 0.32 +1.7 36,198 - H281DRAFT_01918 0.32 -0.1 36,198 - H281DRAFT_01918 0.32 -0.4 36,398 + H281DRAFT_01918 0.56 -0.1 36,398 + H281DRAFT_01918 0.56 +0.4 36,399 - H281DRAFT_01918 0.56 -0.6 36,404 - H281DRAFT_01918 0.56 -0.4 36,470 + H281DRAFT_01918 0.64 -0.5 36,471 - H281DRAFT_01918 0.64 -0.2 36,471 - H281DRAFT_01918 0.64 +0.3 36,509 + H281DRAFT_01918 0.69 +1.0 36,510 - H281DRAFT_01918 0.69 +0.4 36,510 - H281DRAFT_01918 0.69 -0.0 36,643 + H281DRAFT_01918 0.85 +0.0 37,058 + H281DRAFT_01919 0.38 +0.8 37,203 + H281DRAFT_01919 0.61 -0.7 37,203 + H281DRAFT_01919 0.61 +0.9 37,203 + H281DRAFT_01919 0.61 +0.4 37,448 + -2.7 37,448 + +1.4 37,448 + +0.4 37,449 - +0.2 37,529 - -0.0 37,774 + H281DRAFT_01920 0.48 +0.2 37,774 + H281DRAFT_01920 0.48 +2.3 37,775 - H281DRAFT_01920 0.49 +0.1 37,793 + H281DRAFT_01920 0.52 -0.3 37,794 - H281DRAFT_01920 0.52 -1.3 37,826 - H281DRAFT_01920 0.57 +0.2 37,826 - H281DRAFT_01920 0.57 +1.2 37,826 - H281DRAFT_01920 0.57 +0.2 37,877 - H281DRAFT_01920 0.66 +0.5 37,896 - H281DRAFT_01920 0.70 +0.6 37,897 + H281DRAFT_01920 0.70 -0.3 37,897 + H281DRAFT_01920 0.70 +0.2 37,898 - H281DRAFT_01920 0.70 -0.1 38,010 - -1.0 38,023 + -0.3 38,024 - +0.0 38,024 - +0.1 38,024 - +0.5 38,143 + +0.8 38,321 - -0.2
Or see this region's nucleotide sequence