Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01807 and H281DRAFT_01808 are separated by 256 nucleotides H281DRAFT_01808 and H281DRAFT_01809 are separated by 72 nucleotides H281DRAFT_01809 and H281DRAFT_01810 are separated by 6 nucleotides
H281DRAFT_01807: H281DRAFT_01807 - transcriptional regulator, IclR family, at 708,562 to 709,347
_01807
H281DRAFT_01808: H281DRAFT_01808 - Sugar phosphate permease, at 709,604 to 710,980
_01808
H281DRAFT_01809: H281DRAFT_01809 - 3-dehydroquinate dehydratase, at 711,053 to 711,508
_01809
H281DRAFT_01810: H281DRAFT_01810 - transcriptional regulator, LysR family, at 711,515 to 712,483
_01810
Position (kb) 709
710
711 Strain fitness (log2 ratio) -2
-1
0
1 at 709.042 kb on + strand, within H281DRAFT_01807 at 709.090 kb on + strand, within H281DRAFT_01807 at 709.104 kb on + strand at 709.169 kb on + strand, within H281DRAFT_01807 at 709.199 kb on + strand, within H281DRAFT_01807 at 709.303 kb on + strand at 709.348 kb on - strand at 709.512 kb on - strand at 709.934 kb on + strand, within H281DRAFT_01808 at 709.934 kb on + strand, within H281DRAFT_01808 at 709.934 kb on + strand, within H281DRAFT_01808 at 709.934 kb on + strand, within H281DRAFT_01808 at 710.070 kb on - strand, within H281DRAFT_01808 at 710.131 kb on - strand, within H281DRAFT_01808 at 710.131 kb on - strand, within H281DRAFT_01808 at 710.185 kb on - strand, within H281DRAFT_01808 at 710.223 kb on + strand, within H281DRAFT_01808 at 710.225 kb on + strand, within H281DRAFT_01808 at 710.225 kb on + strand, within H281DRAFT_01808 at 710.226 kb on - strand, within H281DRAFT_01808 at 710.227 kb on + strand, within H281DRAFT_01808 at 710.268 kb on + strand, within H281DRAFT_01808 at 710.304 kb on + strand, within H281DRAFT_01808 at 710.408 kb on + strand, within H281DRAFT_01808 at 710.409 kb on - strand, within H281DRAFT_01808 at 710.409 kb on - strand, within H281DRAFT_01808 at 710.579 kb on + strand, within H281DRAFT_01808 at 710.886 kb on + strand at 710.942 kb on + strand at 710.942 kb on + strand at 711.068 kb on + strand at 711.069 kb on - strand at 711.147 kb on + strand, within H281DRAFT_01809 at 711.517 kb on - strand at 711.653 kb on + strand, within H281DRAFT_01810 at 711.690 kb on + strand, within H281DRAFT_01810 at 711.691 kb on - strand, within H281DRAFT_01810 at 711.809 kb on - strand, within H281DRAFT_01810
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 709,042 + H281DRAFT_01807 0.61 +0.1 709,090 + H281DRAFT_01807 0.67 +0.1 709,104 + -0.4 709,169 + H281DRAFT_01807 0.77 -0.5 709,199 + H281DRAFT_01807 0.81 +1.0 709,303 + +1.0 709,348 - +0.3 709,512 - +0.5 709,934 + H281DRAFT_01808 0.24 -1.9 709,934 + H281DRAFT_01808 0.24 +0.4 709,934 + H281DRAFT_01808 0.24 +0.6 709,934 + H281DRAFT_01808 0.24 +0.4 710,070 - H281DRAFT_01808 0.34 +0.3 710,131 - H281DRAFT_01808 0.38 +0.2 710,131 - H281DRAFT_01808 0.38 -0.5 710,185 - H281DRAFT_01808 0.42 +0.3 710,223 + H281DRAFT_01808 0.45 +0.2 710,225 + H281DRAFT_01808 0.45 +1.4 710,225 + H281DRAFT_01808 0.45 +1.1 710,226 - H281DRAFT_01808 0.45 -0.2 710,227 + H281DRAFT_01808 0.45 -0.7 710,268 + H281DRAFT_01808 0.48 -0.3 710,304 + H281DRAFT_01808 0.51 -0.4 710,408 + H281DRAFT_01808 0.58 +0.5 710,409 - H281DRAFT_01808 0.58 -1.1 710,409 - H281DRAFT_01808 0.58 +0.4 710,579 + H281DRAFT_01808 0.71 +0.5 710,886 + -1.2 710,942 + -0.5 710,942 + +0.1 711,068 + +1.0 711,069 - -0.1 711,147 + H281DRAFT_01809 0.21 -0.3 711,517 - +1.0 711,653 + H281DRAFT_01810 0.14 -0.7 711,690 + H281DRAFT_01810 0.18 -0.2 711,691 - H281DRAFT_01810 0.18 -1.4 711,809 - H281DRAFT_01810 0.30 -0.7
Or see this region's nucleotide sequence