Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01700 and H281DRAFT_01701 are separated by 199 nucleotides H281DRAFT_01701 and H281DRAFT_01702 are separated by 361 nucleotides H281DRAFT_01702 and H281DRAFT_01703 are separated by 14 nucleotides H281DRAFT_01703 and H281DRAFT_01704 are separated by 21 nucleotides H281DRAFT_01704 and H281DRAFT_01705 are separated by 69 nucleotides
H281DRAFT_01700: H281DRAFT_01700 - filamentous hemagglutinin family N-terminal domain-containing protein, at 585,502 to 587,886
_01700
H281DRAFT_01701: H281DRAFT_01701 - hypothetical protein, at 588,086 to 588,193
_01701
H281DRAFT_01702: H281DRAFT_01702 - hypothetical protein, at 588,555 to 588,791
_01702
H281DRAFT_01703: H281DRAFT_01703 - Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily), at 588,806 to 590,158
_01703
H281DRAFT_01704: H281DRAFT_01704 - hypothetical protein, at 590,180 to 590,284
_01704
H281DRAFT_01705: H281DRAFT_01705 - aliphatic nitrilase, at 590,354 to 591,346
_01705
Position (kb) 588
589
590
591 Strain fitness (log2 ratio) -2
-1
0
1 at 588.011 kb on + strand at 588.015 kb on - strand at 588.015 kb on - strand at 588.087 kb on + strand at 588.118 kb on - strand, within H281DRAFT_01701 at 588.158 kb on - strand, within H281DRAFT_01701 at 588.223 kb on + strand at 588.286 kb on + strand at 588.400 kb on - strand at 588.907 kb on - strand at 589.035 kb on + strand, within H281DRAFT_01703 at 589.060 kb on + strand, within H281DRAFT_01703 at 589.243 kb on - strand, within H281DRAFT_01703 at 589.318 kb on - strand, within H281DRAFT_01703 at 589.318 kb on - strand, within H281DRAFT_01703 at 590.214 kb on + strand, within H281DRAFT_01704 at 590.215 kb on - strand, within H281DRAFT_01704 at 590.232 kb on + strand, within H281DRAFT_01704 at 590.232 kb on + strand, within H281DRAFT_01704 at 590.851 kb on + strand, within H281DRAFT_01705 at 590.852 kb on - strand, within H281DRAFT_01705
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 588,011 + +0.0 588,015 - -0.5 588,015 - -0.3 588,087 + +0.4 588,118 - H281DRAFT_01701 0.30 -0.4 588,158 - H281DRAFT_01701 0.67 +1.4 588,223 + -1.8 588,286 + -0.3 588,400 - +0.1 588,907 - -0.0 589,035 + H281DRAFT_01703 0.17 -0.7 589,060 + H281DRAFT_01703 0.19 -0.2 589,243 - H281DRAFT_01703 0.32 -1.9 589,318 - H281DRAFT_01703 0.38 -0.2 589,318 - H281DRAFT_01703 0.38 +0.2 590,214 + H281DRAFT_01704 0.32 -0.9 590,215 - H281DRAFT_01704 0.33 +0.2 590,232 + H281DRAFT_01704 0.50 +0.2 590,232 + H281DRAFT_01704 0.50 -0.4 590,851 + H281DRAFT_01705 0.50 +0.0 590,852 - H281DRAFT_01705 0.50 -1.0
Or see this region's nucleotide sequence