Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3965

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
4,079,951	+		Ga0059261_3964	0.28	-0.1
4,079,951	+		Ga0059261_3964	0.28	-1.7
4,079,951	+		Ga0059261_3964	0.28	+0.1
4,079,952	-		Ga0059261_3964	0.28	-0.7
4,079,952	-		Ga0059261_3964	0.28	-1.1
4,079,952	-		Ga0059261_3964	0.28	-0.5
4,079,952	-		Ga0059261_3964	0.28	-0.8
4,079,952	-		Ga0059261_3964	0.28	+0.1
4,079,952	-		Ga0059261_3964	0.28	-1.2
4,080,251	+		Ga0059261_3964	0.53	+0.3
4,080,251	+		Ga0059261_3964	0.53	-1.6
4,080,251	+		Ga0059261_3964	0.53	+0.6
4,080,251	+		Ga0059261_3964	0.53	-0.6
4,080,251	+		Ga0059261_3964	0.53	-0.8
4,080,251	+		Ga0059261_3964	0.53	-0.2
4,080,252	-		Ga0059261_3964	0.53	-0.0
4,080,252	-		Ga0059261_3964	0.53	+0.4
4,080,252	-		Ga0059261_3964	0.53	+0.5
4,080,252	-		Ga0059261_3964	0.53	+0.9
4,080,252	-		Ga0059261_3964	0.53	+0.1
4,080,252	-		Ga0059261_3964	0.53	-0.8
4,080,252	-		Ga0059261_3964	0.53	+0.3
4,080,252	-		Ga0059261_3964	0.53	-0.8
4,080,270	+		Ga0059261_3964	0.55	-0.1
4,080,270	+				-0.6
4,080,270	+		Ga0059261_3964	0.55	-0.3
4,080,271	-		Ga0059261_3964	0.55	+0.6
4,080,271	-		Ga0059261_3964	0.55	-0.1
4,080,271	-		Ga0059261_3964	0.55	-1.0
4,080,271	-		Ga0059261_3964	0.55	-1.0
4,080,271	-		Ga0059261_3964	0.55	-0.1
4,080,271	-		Ga0059261_3964	0.55	-0.2
4,080,271	-		Ga0059261_3964	0.55	+0.8
4,080,271	-		Ga0059261_3964	0.55	-0.3
4,080,272	+		Ga0059261_3964	0.55	-0.5
4,080,272	+		Ga0059261_3964	0.55	+0.4
4,080,272	+		Ga0059261_3964	0.55	-0.1
4,080,272	+		Ga0059261_3964	0.55	-0.8
4,080,272	+		Ga0059261_3964	0.55	-0.3
4,080,273	-		Ga0059261_3964	0.55	-0.1
4,080,273	-		Ga0059261_3964	0.55	-0.3
4,080,273	-		Ga0059261_3964	0.55	-0.6
4,080,273	-		Ga0059261_3964	0.55	-0.8
4,080,273	-		Ga0059261_3964	0.55	-0.4
4,080,390	-		Ga0059261_3964	0.65	+0.3
4,080,390	-		Ga0059261_3964	0.65	-0.6
4,080,390	-		Ga0059261_3964	0.65	+0.2
4,080,539	+		Ga0059261_3964	0.77	-0.3
4,080,539	+		Ga0059261_3964	0.77	+0.2
4,080,539	+		Ga0059261_3964	0.77	-0.6
4,080,540	-		Ga0059261_3964	0.77	-0.6
4,080,540	-		Ga0059261_3964	0.77	-0.2
4,080,540	-		Ga0059261_3964	0.77	-0.5
4,080,540	-		Ga0059261_3964	0.77	-1.1
4,080,540	-		Ga0059261_3964	0.77	-0.7
4,080,540	-		Ga0059261_3964	0.77	-0.4
4,080,540	-		Ga0059261_3964	0.77	-0.6
4,080,690	+				+0.5
4,080,690	+				+0.5
4,080,692	+				+0.1
4,080,692	+				-0.3
4,080,692	+				+0.3
4,080,692	+				-0.0
4,080,692	+				-0.0
4,080,692	+				-1.1
4,080,692	+				-0.3
4,080,692	+				-0.1
4,080,692	+				-0.8
4,080,692	+				-0.6
4,080,693	-				+0.0
4,080,693	-				-0.3
4,080,693	-				+0.6
4,080,693	-				-0.3
4,080,693	-				-1.7
4,080,693	-				-0.7
4,080,693	-				-0.1
4,080,813	+				+0.5
4,080,813	+				+1.4
4,080,813	+				+1.3
4,080,813	+				+0.0
4,080,813	+				+0.0
4,080,813	+				+0.1
4,080,842	-				-1.1
4,081,104	+		Ga0059261_3965	0.19	+0.7
4,081,104	+		Ga0059261_3965	0.19	+0.7
4,081,104	+		Ga0059261_3965	0.19	-0.3
4,081,104	+		Ga0059261_3965	0.19	+1.2
4,081,161	+		Ga0059261_3965	0.23	-0.3
4,081,161	+		Ga0059261_3965	0.23	-1.1
4,081,162	-		Ga0059261_3965	0.23	+0.3
4,081,162	-		Ga0059261_3965	0.23	+1.0
4,081,162	-		Ga0059261_3965	0.23	-0.0
4,081,209	+		Ga0059261_3965	0.26	-2.5
4,081,209	+		Ga0059261_3965	0.26	+0.0
4,081,209	+		Ga0059261_3965	0.26	-0.6
4,081,210	-		Ga0059261_3965	0.26	-0.1
4,081,210	-		Ga0059261_3965	0.26	+1.3
4,081,289	+		Ga0059261_3965	0.32	-0.1
4,081,289	+		Ga0059261_3965	0.32	-0.7
4,081,508	+		Ga0059261_3965	0.49	-1.3
4,081,508	+		Ga0059261_3965	0.49	+0.5
4,081,509	-		Ga0059261_3965	0.49	-0.7
4,081,538	+		Ga0059261_3965	0.51	+0.4
4,081,538	+		Ga0059261_3965	0.51	-0.1
4,081,539	-		Ga0059261_3965	0.51	-0.5
4,081,721	+		Ga0059261_3965	0.64	-1.1
4,081,849	-		Ga0059261_3965	0.74	+1.5
4,081,849	-		Ga0059261_3965	0.74	-0.3
4,082,263	+				-0.3
4,082,300	+		Ga0059261_3966	0.15	-1.4
4,082,300	+		Ga0059261_3966	0.15	-1.0
4,082,428	-		Ga0059261_3966	0.34	-1.7
4,082,469	-		Ga0059261_3966	0.40	-1.2
4,082,853	-				-0.7
4,082,898	+				+1.0
4,082,900	+				-0.2
4,082,900	+				-0.0
4,082,901	-				-0.3
4,082,901	-				-0.3
4,082,925	+				-0.6
4,082,925	+				-3.0
4,082,925	+				-0.5
4,082,925	+				-0.0
4,082,925	+				+0.2
4,082,925	+				-0.1
4,082,925	+				-0.4
4,082,925	+				-1.0
4,082,926	-				-1.5
4,082,926	-				-1.0
4,082,926	-				+0.5
4,082,926	-				+0.2
4,082,926	-				+0.0
4,082,926	-				+0.3
4,082,926	-				+0.1
4,082,926	-				+1.2
4,082,926	-				+0.2
4,082,926	-				-0.8
4,082,926	-				+0.1
4,082,926	-				-0.9
4,082,926	-				-0.1
4,082,926	-				+0.4
4,082,976	+		Ga0059261_3967	0.18	-0.1
4,082,976	+		Ga0059261_3967	0.18	-0.2
4,082,976	+		Ga0059261_3967	0.18	-0.4
4,082,976	+		Ga0059261_3967	0.18	-0.3
4,082,976	+		Ga0059261_3967	0.18	+0.2
4,082,976	+		Ga0059261_3967	0.18	-0.5
4,082,977	-		Ga0059261_3967	0.18	-1.6
4,082,977	-		Ga0059261_3967	0.18	-1.2
4,082,977	-		Ga0059261_3967	0.18	-0.6
4,082,977	-		Ga0059261_3967	0.18	+0.2
4,082,977	-		Ga0059261_3967	0.18	-1.2
4,083,056	+		Ga0059261_3967	0.48	+0.3
4,083,056	+		Ga0059261_3967	0.48	-0.4
4,083,057	-		Ga0059261_3967	0.48	+0.2
4,083,057	-		Ga0059261_3967	0.48	-0.5
4,083,089	+		Ga0059261_3967	0.60	-1.2
4,083,089	+		Ga0059261_3967	0.60	-0.6
4,083,090	-		Ga0059261_3967	0.61	-1.1
4,083,105	+		Ga0059261_3967	0.66	-0.3
4,083,105	+		Ga0059261_3967	0.66	+0.4
4,083,105	+		Ga0059261_3967	0.66	-0.3
4,083,106	-		Ga0059261_3967	0.67	+1.6
4,083,106	-		Ga0059261_3967	0.67	-0.4
4,083,106	-		Ga0059261_3967	0.67	+1.2
4,083,180	+				-1.2
4,083,183	+				-0.3
4,083,183	+				-0.6
4,083,183	+				-0.5
4,083,184	-				-0.3
4,083,184	-				-0.6
4,083,184	-				-0.5
4,083,184	-				-0.3
4,083,184	-				-0.7
4,083,184	-				-0.4
4,083,184	-				-0.9
4,083,192	+				+0.3
4,083,192	+				-1.5
4,083,192	+				+0.0
4,083,192	+				+0.4
4,083,193	-				-0.3
4,083,193	-				-1.7
4,083,193	-				+0.3
4,083,193	-				-1.4