Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3685

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
3,794,979	+		Ga0059261_3683	0.43	-1.1
3,794,980	-		Ga0059261_3683	0.43	-0.5
3,794,980	-				+1.0
3,794,980	-		Ga0059261_3683	0.43	-1.9
3,794,980	-		Ga0059261_3683	0.43	-1.4
3,794,980	-		Ga0059261_3683	0.43	-1.5
3,794,980	-		Ga0059261_3683	0.43	-0.6
3,795,012	+		Ga0059261_3683	0.46	-0.8
3,795,012	+		Ga0059261_3683	0.46	-0.0
3,795,013	-				-0.6
3,795,078	+		Ga0059261_3683	0.52	-0.6
3,795,078	+		Ga0059261_3683	0.52	-0.1
3,795,078	+		Ga0059261_3683	0.52	-0.4
3,795,078	+		Ga0059261_3683	0.52	+1.0
3,795,079	-		Ga0059261_3683	0.52	-0.4
3,795,079	-		Ga0059261_3683	0.52	-0.6
3,795,079	-		Ga0059261_3683	0.52	+0.8
3,795,079	-		Ga0059261_3683	0.52	-1.1
3,795,079	-		Ga0059261_3683	0.52	-1.2
3,795,079	-		Ga0059261_3683	0.52	-1.2
3,795,079	-		Ga0059261_3683	0.52	-1.5
3,795,079	-		Ga0059261_3683	0.52	+0.7
3,795,079	-		Ga0059261_3683	0.52	-0.3
3,795,578	+				+0.5
3,795,578	+				-0.3
3,795,579	-				+0.2
3,795,579	-				-1.1
3,795,599	+				-1.2
3,795,599	+				-1.5
3,795,599	+				+1.1
3,795,599	+				-0.6
3,795,600	-				-0.6
3,795,600	-				-0.1
3,795,600	-				-2.6
3,795,758	+		Ga0059261_3684	0.52	+0.7
3,795,758	+		Ga0059261_3684	0.52	-0.1
3,795,758	+		Ga0059261_3684	0.52	-0.6
3,795,759	-		Ga0059261_3684	0.52	-0.8
3,795,759	-		Ga0059261_3684	0.52	+0.7
3,795,780	-		Ga0059261_3684	0.58	-1.1
3,795,780	-		Ga0059261_3684	0.58	-0.0
3,795,821	+		Ga0059261_3684	0.70	-0.4
3,795,932	-				-0.8
3,795,932	-				-0.6
3,796,159	+		Ga0059261_3685	0.30	-1.6
3,796,159	+		Ga0059261_3685	0.30	-1.7
3,796,159	+		Ga0059261_3685	0.30	-1.3
3,796,159	+		Ga0059261_3685	0.30	-1.5
3,796,159	+		Ga0059261_3685	0.30	-2.5
3,796,159	+		Ga0059261_3685	0.30	-2.0
3,796,159	+		Ga0059261_3685	0.30	-0.0
3,796,159	+		Ga0059261_3685	0.30	-2.1
3,796,159	+		Ga0059261_3685	0.30	+0.5
3,796,159	+		Ga0059261_3685	0.30	-1.6
3,796,159	+		Ga0059261_3685	0.30	-0.4
3,796,159	+				-0.8
3,796,159	+		Ga0059261_3685	0.30	-1.5
3,796,160	-		Ga0059261_3685	0.30	-0.4
3,796,160	-		Ga0059261_3685	0.30	-1.3
3,796,160	-		Ga0059261_3685	0.30	-0.0
3,796,160	-		Ga0059261_3685	0.30	-1.1
3,796,160	-		Ga0059261_3685	0.30	-0.5
3,796,160	-		Ga0059261_3685	0.30	-1.2
3,796,160	-		Ga0059261_3685	0.30	-1.7
3,796,160	-		Ga0059261_3685	0.30	-1.1
3,796,160	-		Ga0059261_3685	0.30	-1.6
3,796,160	-		Ga0059261_3685	0.30	-2.1
3,796,160	-		Ga0059261_3685	0.30	-0.0
3,796,167	+		Ga0059261_3685	0.31	-0.1
3,796,458	+		Ga0059261_3685	0.69	-1.0
3,796,459	-		Ga0059261_3685	0.69	-0.5
3,796,459	-		Ga0059261_3685	0.69	-0.5
3,796,629	+				+0.2
3,796,696	+				-0.9
3,796,696	+				-0.3
3,796,696	+				+0.6
3,796,696	+				+0.2
3,796,697	-				+0.1
3,796,697	-				+0.5
3,796,697	-				+0.1
3,796,697	-				-0.3
3,796,697	-				-0.3
3,796,697	-				+0.7
3,796,697	-				-0.9
3,796,697	-				+0.1
3,796,697	-				-0.3
3,796,697	-				-1.6
3,796,697	-				+0.3
3,796,922	+		Ga0059261_3686	0.25	-1.6
3,796,922	+		Ga0059261_3686	0.25	+0.3
3,796,922	+		Ga0059261_3686	0.25	-0.6
3,796,922	+		Ga0059261_3686	0.25	+2.0
3,796,922	+		Ga0059261_3686	0.25	+0.0
3,796,922	+		Ga0059261_3686	0.25	+0.6
3,796,923	-		Ga0059261_3686	0.25	-0.5
3,796,923	-		Ga0059261_3686	0.25	+0.0
3,796,923	-		Ga0059261_3686	0.25	+0.1
3,797,300	+		Ga0059261_3686	0.68	-0.3
3,797,300	+		Ga0059261_3686	0.68	+1.0
3,797,300	+		Ga0059261_3686	0.68	+0.2
3,797,300	+		Ga0059261_3686	0.68	-0.2
3,797,300	+		Ga0059261_3686	0.68	+1.3
3,797,300	+		Ga0059261_3686	0.68	+0.3
3,797,300	+		Ga0059261_3686	0.68	+1.2
3,797,300	+		Ga0059261_3686	0.68	-0.6
3,797,300	+		Ga0059261_3686	0.68	-0.5
3,797,300	+		Ga0059261_3686	0.68	-0.1
3,797,301	-		Ga0059261_3686	0.68	-0.3
3,797,301	-		Ga0059261_3686	0.68	+0.4
3,797,301	-		Ga0059261_3686	0.68	-0.3
3,797,301	-		Ga0059261_3686	0.68	-1.5
3,797,301	-				-0.3
3,797,301	-		Ga0059261_3686	0.68	+0.2
3,797,301	-		Ga0059261_3686	0.68	-1.6
3,797,301	-		Ga0059261_3686	0.68	+1.0
3,797,306	-		Ga0059261_3686	0.68	-0.7
3,797,348	+		Ga0059261_3686	0.73	+0.1
3,797,348	+		Ga0059261_3686	0.73	-0.2
3,797,348	+		Ga0059261_3686	0.73	-0.3
3,797,348	+		Ga0059261_3686	0.73	+0.6
3,797,348	+		Ga0059261_3686	0.73	-0.2
3,797,348	+		Ga0059261_3686	0.73	-0.9
3,797,348	+		Ga0059261_3686	0.73	-0.1
3,797,348	+		Ga0059261_3686	0.73	+0.2
3,797,348	+		Ga0059261_3686	0.73	-1.2
3,797,348	+		Ga0059261_3686	0.73	-0.1
3,797,348	+		Ga0059261_3686	0.73	+0.3
3,797,349	-		Ga0059261_3686	0.73	+0.6
3,797,349	-		Ga0059261_3686	0.73	-0.5
3,797,349	-		Ga0059261_3686	0.73	-0.3
3,797,349	-		Ga0059261_3686	0.73	-0.1
3,797,502	-				-1.0
3,797,507	+				+0.2
3,797,507	+				+0.4
3,797,508	-				+0.7
3,797,508	-				+0.7
3,797,508	-				-0.6
3,797,508	-				+0.1
3,797,508	-				+0.1
3,797,509	+				+0.4
3,797,509	+				-1.1
3,797,509	+				+1.0
3,797,509	+				-0.3
3,797,509	+				+0.4
3,797,509	+				+0.4
3,797,510	-				+0.2
3,797,510	-				+0.3
3,797,586	-				-0.1
3,797,586	-				-0.7
3,797,586	-				+1.3
3,797,586	-				+0.7
3,797,586	-				+0.3
3,797,646	+				-0.6
3,797,647	-				+0.6
3,797,647	-				+1.2
3,797,647	-				+0.4
3,797,647	-				+0.3
3,797,647	-				-0.8
3,797,647	-				+0.2
3,797,647	-				-0.4