Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3013

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
3,148,632	+		Ga0059261_3011	0.54	+0.8
3,148,632	+		Ga0059261_3011	0.54	-0.3
3,148,632	+		Ga0059261_3011	0.54	+0.4
3,148,633	-		Ga0059261_3011	0.54	-0.1
3,148,633	-		Ga0059261_3011	0.54	-0.1
3,148,728	+		Ga0059261_3011	0.76	-0.5
3,148,728	+		Ga0059261_3011	0.76	-0.1
3,148,729	-		Ga0059261_3011	0.76	-0.1
3,148,729	-		Ga0059261_3011	0.76	+0.3
3,148,729	-		Ga0059261_3011	0.76	-0.2
3,148,809	+				-0.1
3,148,809	+				-0.0
3,148,809	+				-0.4
3,148,809	+				-0.7
3,148,809	+				-0.1
3,148,809	+				-0.5
3,148,809	+				+1.0
3,148,810	-				-0.5
3,148,810	-				+0.1
3,148,810	-				+0.3
3,148,835	+				+0.1
3,148,835	+				-0.7
3,148,836	-				+0.9
3,148,836	-				-0.1
3,148,951	+		Ga0059261_3012	0.25	+1.5
3,148,951	+		Ga0059261_3012	0.25	+0.0
3,148,951	+		Ga0059261_3012	0.25	-0.4
3,148,952	-		Ga0059261_3012	0.25	-0.6
3,148,952	-		Ga0059261_3012	0.25	+0.3
3,148,952	-		Ga0059261_3012	0.25	-0.3
3,148,954	+		Ga0059261_3012	0.25	+0.6
3,148,954	+		Ga0059261_3012	0.25	-0.0
3,148,954	+		Ga0059261_3012	0.25	+0.2
3,148,954	+		Ga0059261_3012	0.25	+0.7
3,148,954	+		Ga0059261_3012	0.25	-0.5
3,148,954	+		Ga0059261_3012	0.25	-0.7
3,148,954	+		Ga0059261_3012	0.25	+0.5
3,148,954	+		Ga0059261_3012	0.25	-0.7
3,148,954	+		Ga0059261_3012	0.25	-0.5
3,148,954	+		Ga0059261_3012	0.25	-1.3
3,148,955	-		Ga0059261_3012	0.26	-0.3
3,148,955	-		Ga0059261_3012	0.26	-0.2
3,148,955	-		Ga0059261_3012	0.26	-0.5
3,148,955	-		Ga0059261_3012	0.26	+0.0
3,148,955	-		Ga0059261_3012	0.26	-2.9
3,148,955	-		Ga0059261_3012	0.26	+0.8
3,148,955	-		Ga0059261_3012	0.26	-0.1
3,148,955	-		Ga0059261_3012	0.26	-1.8
3,148,955	-		Ga0059261_3012	0.26	-0.5
3,148,955	-		Ga0059261_3012	0.26	+0.5
3,148,955	-		Ga0059261_3012	0.26	-0.0
3,148,955	-		Ga0059261_3012	0.26	+1.0
3,148,955	-		Ga0059261_3012	0.26	-0.1
3,148,955	-		Ga0059261_3012	0.26	-1.1
3,149,148	+		Ga0059261_3012	0.63	-0.6
3,149,148	+		Ga0059261_3012	0.63	+0.6
3,149,149	-		Ga0059261_3012	0.63	-0.1
3,149,149	-		Ga0059261_3012	0.63	-0.1
3,149,164	+		Ga0059261_3012	0.66	-0.4
3,149,261	+		Ga0059261_3012	0.84	-1.2
3,149,261	+		Ga0059261_3012	0.84	+0.3
3,149,261	+		Ga0059261_3012	0.84	+0.5
3,149,261	+		Ga0059261_3012	0.84	+0.0
3,149,261	+		Ga0059261_3012	0.84	+0.3
3,149,261	+		Ga0059261_3012	0.84	-0.2
3,149,262	-		Ga0059261_3012	0.84	-1.7
3,149,262	-		Ga0059261_3012	0.84	-0.4
3,149,326	+				-1.2
3,149,326	+				+0.3
3,149,326	+				-0.7
3,149,326	+				-0.6
3,149,326	+				+1.4
3,149,326	+				+0.1
3,149,326	+				-0.4
3,149,326	+				-0.5
3,149,326	+				+0.3
3,149,326	+				+0.6
3,149,326	+				+0.3
3,149,326	+				+0.6
3,149,327	-				-0.3
3,149,327	-				-0.1
3,149,327	-				+0.3
3,149,327	-				+0.6
3,149,327	-				-0.8
3,149,327	-				+0.5
3,149,327	-				-0.3
3,149,327	-				-0.6
3,149,327	-				-0.2
3,149,327	-				+0.4
3,149,327	-				-0.4
3,149,327	-				+0.2
3,149,464	-		Ga0059261_3013	0.30	-1.3
3,149,475	+		Ga0059261_3013	0.32	-0.1
3,149,475	+		Ga0059261_3013	0.32	-0.7
3,149,475	+		Ga0059261_3013	0.32	+0.6
3,149,476	-		Ga0059261_3013	0.33	-1.6
3,149,476	-		Ga0059261_3013	0.33	-0.3
3,149,476	-		Ga0059261_3013	0.33	-0.2
3,149,476	-		Ga0059261_3013	0.33	-0.9
3,149,857	+		Ga0059261_3014	0.26	+0.3
3,149,857	+		Ga0059261_3014	0.26	+0.4
3,149,857	+		Ga0059261_3014	0.26	+0.1
3,149,858	-		Ga0059261_3014	0.26	-0.5
3,149,909	-		Ga0059261_3014	0.40	-0.5
3,149,909	-				+1.3
3,149,909	-		Ga0059261_3014	0.40	+0.4
3,150,038	+		Ga0059261_3014	0.75	+1.2
3,150,038	+		Ga0059261_3014	0.75	+0.4
3,150,038	+		Ga0059261_3014	0.75	-0.0
3,150,038	+		Ga0059261_3014	0.75	+0.4
3,150,038	+		Ga0059261_3014	0.75	-0.6
3,150,039	-		Ga0059261_3014	0.75	-0.2
3,150,039	-		Ga0059261_3014	0.75	+0.4
3,150,039	-		Ga0059261_3014	0.75	+0.3
3,150,042	+		Ga0059261_3014	0.76	+0.2
3,150,042	+		Ga0059261_3014	0.76	+0.4
3,150,042	+		Ga0059261_3014	0.76	+0.6
3,150,042	+		Ga0059261_3014	0.76	+0.3
3,150,042	+		Ga0059261_3014	0.76	-0.2
3,150,042	+		Ga0059261_3014	0.76	-0.1
3,150,042	+		Ga0059261_3014	0.76	-0.7
3,150,042	+				-1.3
3,150,042	+		Ga0059261_3014	0.76	-0.2
3,150,042	+		Ga0059261_3014	0.76	+1.3
3,150,043	-		Ga0059261_3014	0.77	-0.5
3,150,043	-		Ga0059261_3014	0.77	-0.6
3,150,043	-		Ga0059261_3014	0.77	-0.0
3,150,043	-		Ga0059261_3014	0.77	+1.0
3,150,043	-		Ga0059261_3014	0.77	+0.4
3,150,043	-		Ga0059261_3014	0.77	-0.2
3,150,043	-		Ga0059261_3014	0.77	-0.2
3,150,043	-		Ga0059261_3014	0.77	+0.0
3,150,043	-		Ga0059261_3014	0.77	-0.2
3,150,043	-		Ga0059261_3014	0.77	+0.1
3,150,043	-		Ga0059261_3014	0.77	-0.4
3,150,043	-		Ga0059261_3014	0.77	-0.5
3,150,237	+				-0.3
3,150,237	+				-0.5
3,150,238	-				+1.0
3,150,238	-				-0.2
3,150,288	+				-0.1
3,150,288	+				-0.2
3,150,318	-				+1.2
3,150,318	-				+0.8
3,150,318	-				+0.1
3,150,353	+				+1.1
3,150,353	+				-0.1
3,150,353	+				-0.3
3,150,354	-				-0.6
3,150,354	-				+0.7
3,150,564	+		Ga0059261_3015	0.59	-1.0
3,150,564	+		Ga0059261_3015	0.59	-0.7
3,150,565	-				+2.4
3,150,661	+		Ga0059261_3015	0.83	+0.3
3,150,661	+		Ga0059261_3015	0.83	-0.1
3,150,661	+		Ga0059261_3015	0.83	-0.3
3,150,661	+		Ga0059261_3015	0.83	-0.4
3,150,661	+		Ga0059261_3015	0.83	-0.1
3,150,661	+		Ga0059261_3015	0.83	+0.7
3,150,661	+		Ga0059261_3015	0.83	+0.5
3,150,662	-		Ga0059261_3015	0.84	-1.3
3,150,662	-		Ga0059261_3015	0.84	+0.5
3,150,662	-				-0.6
3,150,662	-		Ga0059261_3015	0.84	+0.8
3,150,662	-		Ga0059261_3015	0.84	+0.4
3,150,662	-		Ga0059261_3015	0.84	-0.9
3,150,662	-		Ga0059261_3015	0.84	-0.0
3,150,662	-		Ga0059261_3015	0.84	+0.1
3,150,663	+		Ga0059261_3015	0.84	-1.0
3,150,688	+				+0.2
3,150,688	+				-0.3
3,150,689	-				+0.2