Experiment: NAG (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2468 and Ga0059261_2469 are separated by 4 nucleotides Ga0059261_2469 and Ga0059261_2470 are separated by 83 nucleotides Ga0059261_2470 and Ga0059261_2471 are separated by 147 nucleotides Ga0059261_2471 and Ga0059261_2472 are separated by 63 nucleotides
Ga0059261_2468: Ga0059261_2468 - Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9), at 2,551,656 to 2,552,459
_2468
Ga0059261_2469: Ga0059261_2469 - Predicted acetyltransferase, at 2,552,464 to 2,552,991
_2469
Ga0059261_2470: Ga0059261_2470 - chorismate synthase (EC 4.2.3.5), at 2,553,075 to 2,554,145
_2470
Ga0059261_2471: Ga0059261_2471 - hypothetical protein, at 2,554,293 to 2,554,532
_2471
Ga0059261_2472: Ga0059261_2472 - Adenylosuccinate synthetase (EC 6.3.4.4), at 2,554,596 to 2,555,885
_2472
Position (kb)
2553
2554
2555 Strain fitness (log2 ratio)
-2
-1
0
1 at 2552.725 kb on + strand, within Ga0059261_2469 at 2552.725 kb on + strand, within Ga0059261_2469 at 2552.726 kb on - strand, within Ga0059261_2469 at 2552.791 kb on + strand, within Ga0059261_2469 at 2552.791 kb on + strand, within Ga0059261_2469 at 2552.792 kb on - strand, within Ga0059261_2469 at 2552.824 kb on + strand, within Ga0059261_2469 at 2552.824 kb on + strand, within Ga0059261_2469 at 2552.824 kb on + strand, within Ga0059261_2469 at 2552.825 kb on - strand, within Ga0059261_2469 at 2552.825 kb on - strand, within Ga0059261_2469 at 2552.825 kb on - strand, within Ga0059261_2469 at 2552.825 kb on - strand, within Ga0059261_2469 at 2552.842 kb on + strand, within Ga0059261_2469 at 2552.879 kb on - strand, within Ga0059261_2469 at 2552.890 kb on + strand, within Ga0059261_2469 at 2552.890 kb on + strand, within Ga0059261_2469 at 2552.890 kb on + strand, within Ga0059261_2469 at 2552.890 kb on + strand, within Ga0059261_2469 at 2552.890 kb on + strand, within Ga0059261_2469 at 2552.890 kb on + strand, within Ga0059261_2469 at 2553.007 kb on + strand at 2553.007 kb on + strand at 2553.008 kb on - strand at 2554.277 kb on + strand at 2554.277 kb on + strand at 2554.278 kb on - strand at 2554.278 kb on - strand at 2554.278 kb on - strand at 2554.278 kb on - strand at 2554.278 kb on - strand at 2554.287 kb on + strand at 2554.287 kb on + strand at 2554.287 kb on + strand at 2554.287 kb on + strand at 2554.321 kb on + strand, within Ga0059261_2471 at 2554.355 kb on + strand, within Ga0059261_2471 at 2554.527 kb on + strand at 2554.527 kb on + strand at 2554.527 kb on + strand at 2554.527 kb on + strand at 2554.527 kb on + strand at 2554.527 kb on + strand at 2554.527 kb on + strand at 2554.527 kb on + strand at 2554.528 kb on - strand at 2554.528 kb on - strand at 2554.528 kb on - strand at 2554.528 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (C) remove 2,552,725 + Ga0059261_2469 0.49 +0.4 2,552,725 + Ga0059261_2469 0.49 +0.1 2,552,726 - Ga0059261_2469 0.50 +0.2 2,552,791 + Ga0059261_2469 0.62 +1.0 2,552,791 + Ga0059261_2469 0.62 -1.2 2,552,792 - Ga0059261_2469 0.62 +0.3 2,552,824 + Ga0059261_2469 0.68 +0.9 2,552,824 + Ga0059261_2469 0.68 -1.5 2,552,824 + Ga0059261_2469 0.68 -0.1 2,552,825 - Ga0059261_2469 0.68 -1.3 2,552,825 - Ga0059261_2469 0.68 -0.3 2,552,825 - Ga0059261_2469 0.68 -0.1 2,552,825 - Ga0059261_2469 0.68 +0.4 2,552,842 + Ga0059261_2469 0.72 -0.2 2,552,879 - Ga0059261_2469 0.79 -0.1 2,552,890 + Ga0059261_2469 0.81 +0.5 2,552,890 + Ga0059261_2469 0.81 +0.8 2,552,890 + Ga0059261_2469 0.81 -0.3 2,552,890 + Ga0059261_2469 0.81 +0.1 2,552,890 + Ga0059261_2469 0.81 +0.5 2,552,890 + Ga0059261_2469 0.81 -0.2 2,553,007 + +0.0 2,553,007 + -0.2 2,553,008 - -1.0 2,554,277 + -1.3 2,554,277 + -0.5 2,554,278 - +0.1 2,554,278 - -0.3 2,554,278 - +0.4 2,554,278 - +0.4 2,554,278 - -1.8 2,554,287 + +0.8 2,554,287 + +0.8 2,554,287 + -0.6 2,554,287 + +0.2 2,554,321 + Ga0059261_2471 0.12 +1.5 2,554,355 + Ga0059261_2471 0.26 +0.7 2,554,527 + +0.0 2,554,527 + -0.5 2,554,527 + +0.4 2,554,527 + -0.2 2,554,527 + -0.5 2,554,527 + +0.2 2,554,527 + +0.2 2,554,527 + +0.9 2,554,528 - +0.1 2,554,528 - +1.4 2,554,528 - -0.3 2,554,528 - -0.5
Or see this region's nucleotide sequence