Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2018

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
2,115,605	+		Ga0059261_2017	0.36	+0.7
2,115,606	-		Ga0059261_2017	0.36	+1.4
2,115,902	+		Ga0059261_2017	0.63	+0.7
2,115,902	+		Ga0059261_2017	0.63	+1.3
2,115,902	+		Ga0059261_2017	0.63	+0.7
2,115,903	-		Ga0059261_2017	0.63	+0.4
2,115,903	-		Ga0059261_2017	0.63	+0.8
2,115,903	-		Ga0059261_2017	0.63	+0.4
2,115,903	-		Ga0059261_2017	0.63	+1.8
2,115,903	-		Ga0059261_2017	0.63	+0.4
2,115,903	-		Ga0059261_2017	0.63	+2.1
2,115,903	-		Ga0059261_2017	0.63	+1.4
2,115,903	-		Ga0059261_2017	0.63	+1.5
2,115,903	-		Ga0059261_2017	0.63	+1.5
2,115,903	-		Ga0059261_2017	0.63	+1.6
2,115,903	-		Ga0059261_2017	0.63	+0.6
2,115,903	-		Ga0059261_2017	0.63	+1.0
2,116,024	+		Ga0059261_2017	0.74	+1.8
2,116,024	+		Ga0059261_2017	0.74	+1.6
2,116,024	+		Ga0059261_2017	0.74	+0.6
2,116,024	+		Ga0059261_2017	0.74	+1.1
2,116,024	+		Ga0059261_2017	0.74	+0.3
2,116,024	+		Ga0059261_2017	0.74	+1.2
2,116,024	+		Ga0059261_2017	0.74	+1.0
2,116,024	+		Ga0059261_2017	0.74	+1.7
2,116,024	+		Ga0059261_2017	0.74	+1.5
2,116,025	-		Ga0059261_2017	0.74	+2.3
2,116,025	-		Ga0059261_2017	0.74	-0.5
2,116,025	-		Ga0059261_2017	0.74	+0.9
2,116,025	-		Ga0059261_2017	0.74	+0.9
2,116,099	+		Ga0059261_2017	0.81	+1.9
2,116,107	-		Ga0059261_2017	0.82	+1.3
2,116,107	-		Ga0059261_2017	0.82	+1.1
2,116,107	-		Ga0059261_2017	0.82	+1.3
2,116,277	+				+0.8
2,116,278	-				+1.0
2,116,278	-				+0.0
2,116,278	-				+0.7
2,116,278	-				+1.6
2,116,341	+				+0.8
2,116,341	+				+1.5
2,116,341	+				+1.1
2,116,341	+				+1.7
2,116,341	+				+0.5
2,116,342	-				+0.5
2,116,342	-				+1.4
2,116,342	-				+1.1
2,116,342	-				+0.4
2,116,342	-				+0.9
2,116,342	-				+0.8
2,116,342	-				-0.0
2,116,342	-				+1.2
2,116,342	-				+1.1
2,116,371	+				+1.1
2,116,371	+				+1.3
2,116,422	+				+1.0
2,116,450	+				+0.9
2,116,451	-				+1.1
2,116,451	-				+0.9
2,116,451	-				+0.9
2,116,501	+				-0.8
2,116,501	+				+0.5
2,116,502	-				+1.2
2,116,502	-				+0.8
2,116,548	-				+1.2
2,116,548	-				+0.5
2,116,747	+		Ga0059261_2018	0.23	+0.0
2,116,747	+		Ga0059261_2018	0.23	+1.7
2,116,747	+		Ga0059261_2018	0.23	+1.1
2,116,747	+		Ga0059261_2018	0.23	+1.1
2,116,748	-		Ga0059261_2018	0.23	+1.1
2,116,748	-		Ga0059261_2018	0.23	+0.6
2,116,748	-				+3.1
2,116,748	-		Ga0059261_2018	0.23	+1.1
2,116,768	+		Ga0059261_2018	0.25	+0.3
2,116,768	+		Ga0059261_2018	0.25	+1.4
2,116,768	+		Ga0059261_2018	0.25	+0.7
2,116,768	+		Ga0059261_2018	0.25	-0.2
2,116,768	+		Ga0059261_2018	0.25	+0.8
2,116,768	+		Ga0059261_2018	0.25	+0.1
2,116,769	-		Ga0059261_2018	0.25	+1.2
2,116,769	-				+0.7
2,116,769	-		Ga0059261_2018	0.25	+0.5
2,116,792	+		Ga0059261_2018	0.28	-1.5
2,116,792	+		Ga0059261_2018	0.28	+1.0
2,116,792	+		Ga0059261_2018	0.28	+0.4
2,116,792	+		Ga0059261_2018	0.28	+0.4
2,116,792	+		Ga0059261_2018	0.28	+0.7
2,116,793	-		Ga0059261_2018	0.28	+0.9
2,116,793	-		Ga0059261_2018	0.28	+0.2
2,116,897	+		Ga0059261_2018	0.39	+0.8
2,116,897	+		Ga0059261_2018	0.39	+1.7
2,116,898	-		Ga0059261_2018	0.39	+0.3
2,116,898	-		Ga0059261_2018	0.39	+0.7
2,116,898	-		Ga0059261_2018	0.39	+1.1
2,116,903	+		Ga0059261_2018	0.40	+1.5
2,116,904	-		Ga0059261_2018	0.40	+1.4
2,117,151	+		Ga0059261_2018	0.66	+0.9
2,117,151	+		Ga0059261_2018	0.66	+1.0
2,117,152	-		Ga0059261_2018	0.66	+1.7
2,117,152	-		Ga0059261_2018	0.66	+0.8
2,117,152	-		Ga0059261_2018	0.66	+0.8
2,117,345	+		Ga0059261_2018	0.87	+1.4
2,117,345	+		Ga0059261_2018	0.87	+0.7
2,117,345	+		Ga0059261_2018	0.87	+1.7
2,117,346	-		Ga0059261_2018	0.87	+0.4
2,117,346	-		Ga0059261_2018	0.87	+0.9
2,117,346	-		Ga0059261_2018	0.87	+0.7
2,117,346	-		Ga0059261_2018	0.87	+1.1
2,117,346	-		Ga0059261_2018	0.87	+1.0
2,117,463	+				-2.7
2,117,463	+				-2.5
2,117,464	-				+0.4
2,117,464	-				+1.7
2,117,464	-				+1.0
2,117,464	-				+0.8
2,117,464	-				+1.3
2,117,464	-				+0.6
2,117,464	-				+1.0
2,117,464	-				+2.0
2,117,464	-				+1.1
2,117,464	-				+1.2
2,117,464	-				+1.4
2,117,464	-				-0.7
2,117,464	-				+1.1
2,117,465	+				-3.1
2,117,465	+				+0.3
2,117,465	+				-2.8
2,117,465	+				-0.5
2,117,465	+				-1.5
2,117,465	+				-2.9
2,117,465	+				-1.1
2,117,465	+				-0.7
2,117,465	+				-2.6
2,117,465	+				-2.5
2,117,465	+				-0.4
2,117,465	+				-2.0
2,117,465	+				-2.0
2,117,465	+				-0.7
2,117,465	+				-2.5
2,117,465	+				-3.0
2,117,465	+				-0.9
2,117,465	+				-2.4
2,117,466	-				+0.6
2,117,466	-				-0.7
2,117,466	-				+0.8
2,117,466	-				+0.7
2,117,466	-				+0.9
2,117,466	-				+1.5
2,117,466	-				+1.5
2,117,466	-				+1.4
2,117,466	-				+1.0
2,117,466	-				+0.3
2,117,466	-				+0.7
2,117,466	-				+1.0
2,117,466	-				+0.9
2,117,466	-				+0.2
2,117,466	-				+1.4
2,117,466	-				+1.3
2,117,466	-				+1.7
2,117,631	+		Ga0059261_2019	0.31	-0.7
2,117,638	-		Ga0059261_2019	0.33	+1.3
2,117,638	-		Ga0059261_2019	0.33	+1.2
2,117,638	-		Ga0059261_2019	0.33	+1.0
2,117,776	-		Ga0059261_2019	0.59	+1.3
2,117,943	+				+1.0
2,117,944	-				+0.2
2,117,944	-				+1.0
2,117,944	-				+1.4
2,117,973	+				+1.6
2,117,974	-				+1.6
2,117,974	-				+1.2
2,118,023	+				+1.1
2,118,023	+				+1.5
2,118,023	+				+0.8
2,118,023	+				+0.9
2,118,024	-				+1.3
2,118,024	-				+1.0
2,118,026	+				+1.6
2,118,026	+				+1.1
2,118,026	+				+1.9
2,118,026	+				+0.4
2,118,027	-				+1.3
2,118,056	+				+1.0
2,118,056	+				+1.8
2,118,056	+				+1.6
2,118,057	-				+1.2
2,118,057	-				+1.3
2,118,057	-				+1.6
2,118,057	-				+1.1
2,118,057	-				+1.8
2,118,164	+		Ga0059261_2020	0.14	+0.8
2,118,164	+		Ga0059261_2020	0.14	+1.8
2,118,164	+		Ga0059261_2020	0.14	+0.5
2,118,164	+		Ga0059261_2020	0.14	+1.0
2,118,164	+		Ga0059261_2020	0.14	+1.6
2,118,165	-		Ga0059261_2020	0.14	+1.0
2,118,165	-		Ga0059261_2020	0.14	+0.5
2,118,203	+		Ga0059261_2020	0.17	-0.2
2,118,203	+		Ga0059261_2020	0.17	+1.1
2,118,203	+		Ga0059261_2020	0.17	+1.2
2,118,203	+		Ga0059261_2020	0.17	+0.9
2,118,203	+		Ga0059261_2020	0.17	+1.3
2,118,204	-		Ga0059261_2020	0.17	+0.6
2,118,204	-		Ga0059261_2020	0.17	+1.2
2,118,204	-		Ga0059261_2020	0.17	+0.9
2,118,422	+		Ga0059261_2020	0.35	+0.6
2,118,428	+		Ga0059261_2020	0.36	+1.6
2,118,428	+		Ga0059261_2020	0.36	+1.2
2,118,428	+		Ga0059261_2020	0.36	+1.6
2,118,428	+		Ga0059261_2020	0.36	+1.5
2,118,429	-		Ga0059261_2020	0.36	+1.2
2,118,429	-		Ga0059261_2020	0.36	+0.3
2,118,429	-		Ga0059261_2020	0.36	+1.3
2,118,429	-		Ga0059261_2020	0.36	+0.9
2,118,429	-		Ga0059261_2020	0.36	+1.1
2,118,437	+		Ga0059261_2020	0.37	+1.4
2,118,437	+		Ga0059261_2020	0.37	+1.3
2,118,437	+		Ga0059261_2020	0.37	+1.2
2,118,438	-		Ga0059261_2020	0.37	+0.1
2,118,438	-		Ga0059261_2020	0.37	+1.1
2,118,438	-		Ga0059261_2020	0.37	+2.0
2,118,461	+		Ga0059261_2020	0.39	+0.6
2,118,461	+		Ga0059261_2020	0.39	+1.3