Experiment: NAG (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0120 and Ga0059261_0121 overlap by 17 nucleotides Ga0059261_0121 and Ga0059261_0122 are separated by 28 nucleotides Ga0059261_0122 and Ga0059261_0123 overlap by 4 nucleotides Ga0059261_0123 and Ga0059261_0124 overlap by 4 nucleotides
Ga0059261_0120: Ga0059261_0120 - lytic murein transglycosylase, at 114,126 to 115,178
_0120
Ga0059261_0121: Ga0059261_0121 - Sporulation related domain, at 115,162 to 116,040
_0121
Ga0059261_0122: Ga0059261_0122 - D-alanyl-D-alanine carboxypeptidase, at 116,069 to 117,256
_0122
Ga0059261_0123: Ga0059261_0123 - dTMP kinase, at 117,253 to 117,876
_0123
Ga0059261_0124: Ga0059261_0124 - DNA polymerase III, delta subunit, at 117,873 to 118,856
_0124
Position (kb) 116
117
118 Strain fitness (log2 ratio) -1
0
1
2 at 115.080 kb on + strand at 115.080 kb on + strand at 115.098 kb on + strand at 115.098 kb on + strand at 115.116 kb on + strand at 115.116 kb on + strand at 115.118 kb on + strand at 115.118 kb on + strand at 115.118 kb on + strand at 115.134 kb on + strand at 115.134 kb on + strand at 115.134 kb on + strand at 115.430 kb on + strand, within Ga0059261_0121 at 115.455 kb on + strand, within Ga0059261_0121 at 115.536 kb on + strand, within Ga0059261_0121 at 116.008 kb on + strand at 116.008 kb on + strand at 116.008 kb on + strand at 116.603 kb on + strand, within Ga0059261_0122
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (C) remove 115,080 + +1.0 115,080 + +0.2 115,098 + +1.1 115,098 + +0.2 115,116 + +1.2 115,116 + +0.1 115,118 + +0.2 115,118 + +0.5 115,118 + -0.9 115,134 + +1.0 115,134 + +0.5 115,134 + -0.2 115,430 + Ga0059261_0121 0.30 +0.4 115,455 + Ga0059261_0121 0.33 +2.5 115,536 + Ga0059261_0121 0.43 +0.1 116,008 + +0.1 116,008 + +0.5 116,008 + +0.8 116,603 + Ga0059261_0122 0.45 +0.5
Or see this region's nucleotide sequence