Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02275

Experiment: PYE 0.5x 4C survival rep3 58 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 4C survival rep3 58 days
2,424,821	-		CCNA_02272	0.55	+0.8
2,424,876	+		CCNA_02272	0.78	-0.8
2,424,876	+		CCNA_02272	0.78	-0.5
2,424,884	-		CCNA_02272	0.81	+0.7
2,424,886	+		CCNA_02272	0.82	-2.4
2,424,904	-		CCNA_02272	0.89	-0.1
2,424,975	-				+2.3
2,424,999	-		CCNA_02273	0.14	+0.8
2,425,019	-		CCNA_02273	0.22	+0.0
2,425,033	-		CCNA_02273	0.28	+0.7
2,425,084	+		CCNA_02273	0.48	-3.1
2,425,100	-		CCNA_02273	0.55	+0.1
2,425,110	-		CCNA_02273	0.59	+0.9
2,425,166	+		CCNA_02273	0.81	-1.4
2,425,189	-				+0.8
2,425,206	+				-1.7
2,425,208	+				-1.2
2,425,214	+				-1.2
2,425,214	+				+0.4
2,425,237	+				-0.7
2,425,248	+				-2.1
2,425,255	-				+0.6
2,425,256	-				+0.6
2,425,256	-				+1.7
2,425,256	-				+0.5
2,425,256	-				+0.3
2,425,292	-				-0.2
2,425,325	+				+0.2
2,425,330	-				-0.1
2,425,335	+				-1.5
2,425,335	+				+0.8
2,425,343	-				+1.7
2,425,362	-				+0.2
2,425,398	-		CCNA_02274	0.12	-0.7
2,425,443	-		CCNA_02274	0.22	-1.2
2,425,520	+		CCNA_02274	0.37	-0.6
2,425,533	-		CCNA_02274	0.40	-2.8
2,425,552	+		CCNA_02274	0.44	-0.6
2,425,558	+		CCNA_02274	0.45	+0.4
2,425,566	-		CCNA_02274	0.47	-1.7
2,425,576	+		CCNA_02274	0.49	+1.0
2,425,576	+		CCNA_02274	0.49	-0.4
2,425,576	+		CCNA_02274	0.49	-0.5
2,425,576	+		CCNA_02274	0.49	-0.4
2,425,576	+		CCNA_02274	0.49	+0.3
2,425,576	+		CCNA_02274	0.49	-1.6
2,425,576	+		CCNA_02274	0.49	+1.7
2,425,584	-		CCNA_02274	0.51	+1.2
2,425,600	+		CCNA_02274	0.54	-0.1
2,425,600	+		CCNA_02274	0.54	-1.2
2,425,615	+		CCNA_02274	0.57	+1.2
2,425,629	-		CCNA_02274	0.60	-3.0
2,425,635	-		CCNA_02274	0.61	-2.8
2,425,674	-		CCNA_02274	0.69	-2.3
2,425,698	-		CCNA_02274	0.74	+0.5
2,425,708	-		CCNA_02274	0.76	-1.1
2,425,744	-		CCNA_02274	0.84	-1.7
2,425,748	-		CCNA_02274	0.84	+1.0
2,425,759	+		CCNA_02274	0.87	+0.4
2,425,782	+				-0.6
2,425,790	-				-1.7
2,425,790	-				+0.2
2,425,790	-				-0.9
2,425,790	-				-1.1
2,425,790	-				-0.4
2,425,790	-				-1.2
2,425,790	-				+1.0
2,425,795	-				-0.6
2,425,838	+				-0.8
2,425,856	+				-1.9
2,425,856	+				-1.2
2,425,856	+				-1.4
2,425,856	+				-2.8
2,425,870	+				-0.1
2,425,878	-				-0.6
2,425,907	+		CCNA_02275	0.11	-0.4
2,425,961	+		CCNA_02275	0.18	-0.9
2,425,983	+		CCNA_02275	0.21	+1.9
2,425,995	+		CCNA_02275	0.22	-1.9
2,425,995	+		CCNA_02275	0.22	-1.9
2,426,005	+		CCNA_02275	0.24	-2.0
2,426,008	-		CCNA_02275	0.24	-0.4
2,426,015	+		CCNA_02275	0.25	+1.2
2,426,015	+		CCNA_02275	0.25	-1.3
2,426,023	-		CCNA_02275	0.26	-1.0
2,426,030	-		CCNA_02275	0.27	-1.8
2,426,062	-		CCNA_02275	0.31	-3.2
2,426,112	+		CCNA_02275	0.37	+0.6
2,426,120	+		CCNA_02275	0.38	-2.2
2,426,120	+		CCNA_02275	0.38	+2.2
2,426,120	+		CCNA_02275	0.38	-1.4
2,426,128	-		CCNA_02275	0.39	-2.8
2,426,135	-		CCNA_02275	0.40	+0.4
2,426,176	+		CCNA_02275	0.45	-3.7
2,426,183	-		CCNA_02275	0.46	-0.8
2,426,191	+		CCNA_02275	0.47	-2.2
2,426,192	+		CCNA_02275	0.47	-1.1
2,426,199	-		CCNA_02275	0.48	-2.4
2,426,199	-		CCNA_02275	0.48	-1.7
2,426,199	-		CCNA_02275	0.48	-1.7
2,426,224	+		CCNA_02275	0.51	-2.3
2,426,256	+		CCNA_02275	0.55	+0.6
2,426,256	+		CCNA_02275	0.55	-1.9
2,426,256	+		CCNA_02275	0.55	+0.6
2,426,256	+		CCNA_02275	0.55	+2.2
2,426,264	-		CCNA_02275	0.56	-1.7
2,426,264	-		CCNA_02275	0.56	-0.9
2,426,264	-		CCNA_02275	0.56	-0.2
2,426,264	-		CCNA_02275	0.56	-2.4
2,426,264	-		CCNA_02275	0.56	+0.4
2,426,264	-		CCNA_02275	0.56	-0.6
2,426,264	-		CCNA_02275	0.56	-2.3
2,426,264	-		CCNA_02275	0.56	+0.1
2,426,296	+		CCNA_02275	0.61	-2.8
2,426,304	-		CCNA_02275	0.62	-1.8
2,426,316	+		CCNA_02275	0.63	-1.6
2,426,324	-		CCNA_02275	0.64	-2.3
2,426,334	-		CCNA_02275	0.65	-0.3
2,426,337	+		CCNA_02275	0.66	-1.5
2,426,337	+		CCNA_02275	0.66	-2.5
2,426,337	+		CCNA_02275	0.66	-1.7
2,426,345	-		CCNA_02275	0.67	+0.0
2,426,345	-		CCNA_02275	0.67	+0.2
2,426,345	-		CCNA_02275	0.67	-0.1
2,426,356	+		CCNA_02275	0.68	+2.2
2,426,368	-		CCNA_02275	0.70	+0.1
2,426,392	+		CCNA_02275	0.73	+2.8
2,426,465	+		CCNA_02275	0.82	-0.1
2,426,473	-		CCNA_02275	0.83	-1.5
2,426,531	+				-1.7
2,426,534	-				-0.8
2,426,539	-				-0.4
2,426,539	-				+0.8
2,426,546	+				-0.1
2,426,556	+				+0.6
2,426,556	+				-1.6
2,426,558	+				-1.9
2,426,576	+				+1.2
2,426,695	-				-0.1
2,426,751	+				-2.2
2,426,751	+				-0.8
2,426,759	-				-1.5
2,426,821	+				-1.7
2,426,900	-				-1.4
2,426,912	+				-1.1
2,426,917	+				-1.5
2,426,917	+				-2.6
2,426,917	+				+1.3
2,426,917	+				-1.8
2,426,917	+				-2.2
2,426,925	-				-2.7
2,426,947	-				-2.7
2,426,982	-				-0.4
2,427,006	+		CCNA_02277	0.11	+1.2
2,427,056	+		CCNA_02277	0.13	-1.5
2,427,085	+		CCNA_02277	0.14	-1.4
2,427,133	-		CCNA_02277	0.17	-2.9
2,427,146	+		CCNA_02277	0.17	+0.6
2,427,172	+		CCNA_02277	0.18	-0.0
2,427,178	+		CCNA_02277	0.19	-0.6
2,427,224	-		CCNA_02277	0.21	+0.2
2,427,358	-		CCNA_02277	0.27	-1.9
2,427,363	-		CCNA_02277	0.27	+2.6
2,427,370	+		CCNA_02277	0.27	-2.3
2,427,373	-		CCNA_02277	0.27	-0.1
2,427,422	-		CCNA_02277	0.30	+0.4
2,427,435	-		CCNA_02277	0.30	-1.1
2,427,437	-		CCNA_02277	0.30	+2.2
2,427,452	+		CCNA_02277	0.31	-3.0
2,427,452	+		CCNA_02277	0.31	-1.9
2,427,457	+		CCNA_02277	0.31	-1.6
2,427,460	-		CCNA_02277	0.31	-2.6
2,427,481	+		CCNA_02277	0.32	+0.6
2,427,482	+		CCNA_02277	0.32	-0.1
2,427,501	-		CCNA_02277	0.33	-1.7
2,427,523	+		CCNA_02277	0.34	-1.7
2,427,523	+		CCNA_02277	0.34	+0.9
2,427,523	+		CCNA_02277	0.34	-1.4
2,427,523	+		CCNA_02277	0.34	-1.2
2,427,531	-		CCNA_02277	0.35	-0.3
2,427,531	-		CCNA_02277	0.35	-1.1
2,427,531	-		CCNA_02277	0.35	-0.9
2,427,531	-		CCNA_02277	0.35	-1.1
2,427,531	-		CCNA_02277	0.35	-1.9
2,427,555	-		CCNA_02277	0.36	+3.2
2,427,563	-		CCNA_02277	0.36	-0.7