Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3493

Experiment: Varel_Bryant medium with Dimethyl Sulfoxide 2 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant medium with Dimethyl Sulfoxide 2 vol%
4,504,131	+		BT3492	0.34	-1.2
4,504,132	-		BT3492	0.34	+1.0
4,504,135	+		BT3492	0.34	+0.0
4,504,136	-		BT3492	0.34	-2.1
4,504,228	+		BT3492	0.41	-3.2
4,504,229	-		BT3492	0.41	-0.6
4,504,246	-		BT3492	0.42	+0.4
4,504,267	-		BT3492	0.43	-0.2
4,504,267	-		BT3492	0.43	-0.6
4,504,352	+		BT3492	0.49	-2.6
4,504,353	-		BT3492	0.49	-0.6
4,504,363	-		BT3492	0.50	+1.0
4,504,405	-		BT3492	0.53	-1.7
4,504,494	+		BT3492	0.59	+0.6
4,504,616	-		BT3492	0.67	-0.7
4,504,626	+		BT3492	0.67	-0.4
4,504,627	-		BT3492	0.67	+1.0
4,504,645	+		BT3492	0.69	-0.6
4,504,646	-		BT3492	0.69	+0.0
4,504,653	+		BT3492	0.69	+0.0
4,504,653	+		BT3492	0.69	-1.0
4,504,654	-		BT3492	0.69	-1.2
4,504,654	-		BT3492	0.69	+1.0
4,504,654	-				+0.0
4,504,760	-		BT3492	0.76	+1.0
4,504,760	-		BT3492	0.76	-1.6
4,505,020	-				-0.6
4,505,021	+				+2.3
4,505,026	+				+0.3
4,505,026	+				-1.5
4,505,027	-				-1.0
4,505,048	-				-1.6
4,505,048	-				-1.3
4,505,050	+				-0.0
4,505,093	-				+1.0
4,505,111	+				-0.7
4,505,112	-				-0.8
4,505,150	+				-1.7
4,505,160	+				-0.5
4,505,362	+		BT3493	0.29	+1.0
4,505,362	+		BT3493	0.29	-2.9
4,505,407	-		BT3493	0.35	-1.5
4,505,464	-		BT3493	0.42	-1.2
4,505,506	-		BT3493	0.47	-2.1
4,505,508	+		BT3493	0.47	-2.0
4,505,509	-		BT3493	0.48	-1.7
4,505,517	-		BT3493	0.49	-1.4
4,505,574	+		BT3493	0.56	+0.6
4,505,625	+		BT3493	0.62	+2.0
4,505,649	+		BT3493	0.65	-1.7
4,505,652	-		BT3493	0.65	+1.0
4,505,681	-		BT3493	0.69	+0.0
4,505,685	-		BT3493	0.70	-0.5
4,505,687	+		BT3493	0.70	-0.3
4,505,753	+		BT3493	0.78	-1.2
4,505,753	+		BT3493	0.78	-2.6
4,505,776	-		BT3493	0.81	-1.0
4,505,780	-		BT3493	0.81	-2.4
4,505,805	-		BT3493	0.85	-1.2
4,505,808	-		BT3493	0.85	-0.4
4,505,814	+		BT3493	0.86	-0.6
4,505,878	-				-1.3
4,505,966	-				-1.2
4,505,966	-				-1.5
4,505,969	+				-1.7
4,505,969	+				+0.4
4,506,078	-				-0.6
4,506,133	-				-0.9
4,506,149	+				-0.2
4,506,150	-				+2.6
4,506,153	+				-1.3
4,506,153	+				-0.7
4,506,159	-				+1.0
4,506,159	-				-0.5
4,506,189	-		BT3494	0.11	-0.3
4,506,189	-		BT3494	0.11	-0.9
4,506,297	-		BT3494	0.16	+0.0
4,506,307	+		BT3494	0.16	+1.0
4,506,354	-		BT3494	0.18	-1.1
4,506,383	+		BT3494	0.19	-1.3
4,506,384	-		BT3494	0.20	+1.0
4,506,384	-		BT3494	0.20	-1.7
4,506,386	-		BT3494	0.20	-0.8
4,506,386	-		BT3494	0.20	-0.5
4,506,386	-		BT3494	0.20	+0.4
4,506,386	-		BT3494	0.20	-1.3
4,506,464	+		BT3494	0.23	-1.7
4,506,465	-		BT3494	0.23	-0.9
4,506,521	-		BT3494	0.25	+0.0
4,506,635	-		BT3494	0.30	-0.7
4,506,635	-		BT3494	0.30	+2.0
4,506,762	-		BT3494	0.36	-1.1
4,506,764	+		BT3494	0.36	-1.7
4,506,766	+		BT3494	0.36	-1.1
4,506,767	-		BT3494	0.36	-1.3
4,506,772	-		BT3494	0.36	+1.0
4,506,909	+		BT3494	0.42	-1.8
4,506,912	-		BT3494	0.42	-1.0