Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3019

Experiment: Varel_Bryant medium with Dimethyl Sulfoxide 2 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant medium with Dimethyl Sulfoxide 2 vol%
3,817,228	+		BT3018	0.53	-0.7
3,817,242	+		BT3018	0.54	+1.2
3,817,243	-		BT3018	0.54	+1.0
3,817,244	+		BT3018	0.54	+0.5
3,817,307	+		BT3018	0.58	-1.0
3,817,357	-		BT3018	0.60	-1.3
3,817,498	+		BT3018	0.68	+0.4
3,817,573	+		BT3018	0.72	-1.0
3,817,579	+		BT3018	0.72	+0.0
3,817,579	+				+0.0
3,817,580	-		BT3018	0.72	-0.6
3,817,592	+		BT3018	0.73	-1.2
3,817,592	+		BT3018	0.73	-0.6
3,817,593	-		BT3018	0.73	-1.2
3,817,593	-		BT3018	0.73	-0.8
3,817,611	+		BT3018	0.74	+3.0
3,817,651	-		BT3018	0.76	+0.0
3,817,651	-		BT3018	0.76	-1.0
3,817,663	+		BT3018	0.77	-2.3
3,817,663	+		BT3018	0.77	-1.6
3,817,713	-		BT3018	0.80	-1.0
3,817,879	-				+0.3
3,817,976	-				-1.2
3,817,976	-				-1.9
3,818,027	-				-0.4
3,818,027	-				-0.9
3,818,091	+				+0.6
3,818,093	+				+0.4
3,818,093	+				-0.8
3,818,137	+				-2.3
3,818,174	-				-0.8
3,818,184	+				-1.5
3,818,224	-				-1.6
3,818,225	+				-1.2
3,818,225	+				-1.3
3,818,225	+				-1.3
3,818,226	-				-1.5
3,818,226	-				+0.0
3,818,231	+				-0.6
3,818,247	-				-0.7
3,818,261	+				-0.2
3,818,420	+		BT3019	0.20	-0.3
3,818,421	-		BT3019	0.21	+0.0
3,818,425	-		BT3019	0.21	-1.0
3,818,432	+		BT3019	0.22	+0.0
3,818,433	-		BT3019	0.22	+0.1
3,818,444	+		BT3019	0.23	-0.4
3,818,445	-		BT3019	0.23	+0.0
3,818,473	-		BT3019	0.26	-0.8
3,818,514	-		BT3019	0.30	-1.0
3,818,552	+		BT3019	0.34	+0.6
3,818,562	-		BT3019	0.35	-0.7
3,818,576	+		BT3019	0.36	-2.9
3,818,577	-		BT3019	0.36	-0.4
3,818,631	-		BT3019	0.42	-1.0
3,818,661	+		BT3019	0.45	+0.0
3,818,662	-		BT3019	0.45	-0.3
3,818,773	+		BT3019	0.56	+1.0
3,818,775	+		BT3019	0.56	+0.0
3,819,077	+		BT3019	0.87	-0.2
3,819,078	-		BT3019	0.87	-0.5
3,819,140	+				+0.0
3,819,153	+				-1.3
3,819,154	-				-3.2
3,819,154	-				-0.8
3,819,158	+				+0.0
3,819,166	+				+1.0
3,819,167	-				+1.0
3,819,167	-				-1.0
3,819,171	-				-2.2
3,819,176	-				-0.5
3,819,177	+				-1.3
3,819,178	-				-0.6
3,819,185	+				-1.1
3,819,185	+				-0.9
3,819,211	-				+1.4
3,819,217	+				-2.3
3,819,267	+				+0.0
3,819,272	+				-0.6
3,819,273	-				-1.0
3,819,288	-				-0.1
3,819,390	+				-1.3
3,819,392	+				-2.0
3,819,435	+				-0.3
3,819,436	-				-1.3
3,819,436	-				+1.0
3,819,437	+				+0.0
3,819,475	+		BT3020	0.12	-0.7
3,819,476	-		BT3020	0.12	-0.6
3,819,487	-		BT3020	0.13	+1.0
3,819,504	-		BT3020	0.14	-1.6
3,819,619	+		BT3020	0.22	-0.6
3,819,619	+		BT3020	0.22	+0.2
3,819,736	+		BT3020	0.29	-1.1
3,819,737	-		BT3020	0.29	-1.0
3,819,737	-		BT3020	0.29	-0.5
3,819,751	-		BT3020	0.30	-1.6
3,819,789	-		BT3020	0.33	-0.6
3,819,808	-		BT3020	0.34	-1.1
3,819,880	-		BT3020	0.39	-1.9
3,819,918	-		BT3020	0.41	+0.6
3,819,918	-		BT3020	0.41	-0.2
3,819,922	-		BT3020	0.41	+1.4
3,819,922	-		BT3020	0.41	-1.0
3,819,922	-		BT3020	0.41	-1.0
3,819,925	+		BT3020	0.41	+0.3
3,819,934	+		BT3020	0.42	-0.8
3,819,942	+		BT3020	0.43	-1.0
3,819,979	-		BT3020	0.45	+0.4
3,820,058	-		BT3020	0.50	+0.0
3,820,141	+		BT3020	0.55	-0.7
3,820,142	-		BT3020	0.56	+0.0
3,820,177	-		BT3020	0.58	-0.3
3,820,177	-		BT3020	0.58	-0.7