Experiment: Europium(III) chloride 0.000195313 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4252 and Pf6N2E2_4253 overlap by 4 nucleotides Pf6N2E2_4253 and Pf6N2E2_4254 overlap by 4 nucleotides
Pf6N2E2_4252 - Membrane protease subunits, stomatin/prohibitin homologs, at 4,947,884 to 4,949,845
_4252
Pf6N2E2_4253 - HflC protein, at 4,949,842 to 4,950,882
_4253
Pf6N2E2_4254 - HflK protein, at 4,950,879 to 4,951,931
_4254
Position (kb)
4949
4950
4951 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4948.892 kb on + strand, within Pf6N2E2_4252 at 4948.892 kb on + strand, within Pf6N2E2_4252 at 4948.892 kb on + strand, within Pf6N2E2_4252 at 4948.892 kb on + strand, within Pf6N2E2_4252 at 4948.893 kb on - strand, within Pf6N2E2_4252 at 4948.893 kb on - strand, within Pf6N2E2_4252 at 4948.893 kb on - strand, within Pf6N2E2_4252 at 4948.893 kb on - strand, within Pf6N2E2_4252 at 4948.893 kb on - strand, within Pf6N2E2_4252 at 4948.893 kb on - strand, within Pf6N2E2_4252 at 4949.225 kb on + strand, within Pf6N2E2_4252 at 4949.225 kb on + strand, within Pf6N2E2_4252 at 4949.225 kb on + strand, within Pf6N2E2_4252 at 4949.226 kb on - strand, within Pf6N2E2_4252 at 4949.681 kb on + strand at 4949.681 kb on + strand at 4949.681 kb on + strand at 4949.682 kb on - strand at 4949.682 kb on - strand at 4949.682 kb on - strand at 4949.779 kb on + strand at 4949.993 kb on + strand, within Pf6N2E2_4253 at 4950.048 kb on + strand, within Pf6N2E2_4253 at 4950.049 kb on - strand, within Pf6N2E2_4253 at 4950.162 kb on + strand, within Pf6N2E2_4253 at 4950.162 kb on + strand, within Pf6N2E2_4253 at 4950.162 kb on + strand, within Pf6N2E2_4253 at 4950.162 kb on + strand, within Pf6N2E2_4253 at 4950.163 kb on - strand, within Pf6N2E2_4253 at 4950.163 kb on - strand, within Pf6N2E2_4253 at 4950.163 kb on - strand, within Pf6N2E2_4253 at 4950.223 kb on + strand, within Pf6N2E2_4253 at 4950.223 kb on + strand, within Pf6N2E2_4253 at 4950.223 kb on + strand, within Pf6N2E2_4253 at 4950.223 kb on + strand, within Pf6N2E2_4253 at 4950.223 kb on + strand, within Pf6N2E2_4253 at 4950.378 kb on + strand, within Pf6N2E2_4253 at 4950.460 kb on + strand, within Pf6N2E2_4253 at 4950.460 kb on + strand, within Pf6N2E2_4253 at 4950.460 kb on + strand, within Pf6N2E2_4253 at 4950.461 kb on - strand, within Pf6N2E2_4253 at 4950.461 kb on - strand, within Pf6N2E2_4253 at 4950.461 kb on - strand, within Pf6N2E2_4253 at 4950.689 kb on + strand, within Pf6N2E2_4253 at 4950.689 kb on + strand, within Pf6N2E2_4253 at 4950.689 kb on + strand, within Pf6N2E2_4253 at 4950.690 kb on - strand, within Pf6N2E2_4253 at 4950.690 kb on - strand, within Pf6N2E2_4253 at 4950.706 kb on + strand, within Pf6N2E2_4253 at 4950.706 kb on + strand, within Pf6N2E2_4253 at 4950.706 kb on + strand, within Pf6N2E2_4253 at 4950.706 kb on + strand, within Pf6N2E2_4253 at 4950.706 kb on + strand, within Pf6N2E2_4253 at 4950.706 kb on + strand, within Pf6N2E2_4253 at 4950.707 kb on - strand, within Pf6N2E2_4253 at 4950.707 kb on - strand, within Pf6N2E2_4253 at 4950.707 kb on - strand, within Pf6N2E2_4253 at 4950.707 kb on - strand, within Pf6N2E2_4253 at 4950.707 kb on - strand, within Pf6N2E2_4253 at 4950.707 kb on - strand, within Pf6N2E2_4253 at 4950.707 kb on - strand, within Pf6N2E2_4253 at 4950.739 kb on + strand, within Pf6N2E2_4253 at 4950.740 kb on - strand, within Pf6N2E2_4253 at 4950.740 kb on - strand, within Pf6N2E2_4253 at 4950.740 kb on - strand, within Pf6N2E2_4253 at 4950.910 kb on + strand at 4950.957 kb on + strand at 4950.958 kb on - strand at 4951.245 kb on + strand, within Pf6N2E2_4254 at 4951.246 kb on - strand, within Pf6N2E2_4254 at 4951.249 kb on + strand, within Pf6N2E2_4254 at 4951.249 kb on + strand, within Pf6N2E2_4254 at 4951.250 kb on - strand, within Pf6N2E2_4254 at 4951.250 kb on - strand, within Pf6N2E2_4254 at 4951.296 kb on + strand, within Pf6N2E2_4254 at 4951.297 kb on - strand, within Pf6N2E2_4254 at 4951.297 kb on - strand, within Pf6N2E2_4254 at 4951.315 kb on - strand, within Pf6N2E2_4254
Per-strain Table
Position Strand Gene LocusTag Fraction Europium(III) chloride 0.000195313 M remove 4,948,892 + Pf6N2E2_4252 0.51 -0.0 4,948,892 + Pf6N2E2_4252 0.51 -0.1 4,948,892 + Pf6N2E2_4252 0.51 +0.2 4,948,892 + Pf6N2E2_4252 0.51 +0.1 4,948,893 - Pf6N2E2_4252 0.51 +0.0 4,948,893 - Pf6N2E2_4252 0.51 -0.1 4,948,893 - Pf6N2E2_4252 0.51 -0.1 4,948,893 - Pf6N2E2_4252 0.51 -0.4 4,948,893 - Pf6N2E2_4252 0.51 -0.4 4,948,893 - Pf6N2E2_4252 0.51 -0.8 4,949,225 + Pf6N2E2_4252 0.68 +0.4 4,949,225 + Pf6N2E2_4252 0.68 +0.2 4,949,225 + Pf6N2E2_4252 0.68 -0.1 4,949,226 - Pf6N2E2_4252 0.68 +0.6 4,949,681 + +0.6 4,949,681 + +2.6 4,949,681 + +2.6 4,949,682 - +0.7 4,949,682 - +1.7 4,949,682 - +0.3 4,949,779 + +0.1 4,949,993 + Pf6N2E2_4253 0.15 -1.0 4,950,048 + Pf6N2E2_4253 0.20 -1.2 4,950,049 - Pf6N2E2_4253 0.20 -0.0 4,950,162 + Pf6N2E2_4253 0.31 -0.1 4,950,162 + Pf6N2E2_4253 0.31 -0.1 4,950,162 + Pf6N2E2_4253 0.31 -0.4 4,950,162 + Pf6N2E2_4253 0.31 +1.2 4,950,163 - Pf6N2E2_4253 0.31 -0.4 4,950,163 - Pf6N2E2_4253 0.31 +0.3 4,950,163 - Pf6N2E2_4253 0.31 -0.6 4,950,223 + Pf6N2E2_4253 0.37 -0.5 4,950,223 + Pf6N2E2_4253 0.37 +0.0 4,950,223 + Pf6N2E2_4253 0.37 +0.3 4,950,223 + Pf6N2E2_4253 0.37 +0.1 4,950,223 + Pf6N2E2_4253 0.37 -1.3 4,950,378 + Pf6N2E2_4253 0.51 +0.4 4,950,460 + Pf6N2E2_4253 0.59 -1.1 4,950,460 + Pf6N2E2_4253 0.59 -0.3 4,950,460 + Pf6N2E2_4253 0.59 -0.3 4,950,461 - Pf6N2E2_4253 0.59 -0.4 4,950,461 - Pf6N2E2_4253 0.59 -1.0 4,950,461 - Pf6N2E2_4253 0.59 +0.1 4,950,689 + Pf6N2E2_4253 0.81 -0.7 4,950,689 + Pf6N2E2_4253 0.81 -0.3 4,950,689 + Pf6N2E2_4253 0.81 +0.4 4,950,690 - Pf6N2E2_4253 0.81 +1.6 4,950,690 - Pf6N2E2_4253 0.81 -1.2 4,950,706 + Pf6N2E2_4253 0.83 -0.2 4,950,706 + Pf6N2E2_4253 0.83 +1.9 4,950,706 + Pf6N2E2_4253 0.83 -0.9 4,950,706 + Pf6N2E2_4253 0.83 -1.0 4,950,706 + Pf6N2E2_4253 0.83 -0.2 4,950,706 + Pf6N2E2_4253 0.83 -0.2 4,950,707 - Pf6N2E2_4253 0.83 -0.9 4,950,707 - Pf6N2E2_4253 0.83 +0.1 4,950,707 - Pf6N2E2_4253 0.83 -0.0 4,950,707 - Pf6N2E2_4253 0.83 -0.9 4,950,707 - Pf6N2E2_4253 0.83 +0.5 4,950,707 - Pf6N2E2_4253 0.83 -0.3 4,950,707 - Pf6N2E2_4253 0.83 -0.2 4,950,739 + Pf6N2E2_4253 0.86 -0.2 4,950,740 - Pf6N2E2_4253 0.86 +0.3 4,950,740 - Pf6N2E2_4253 0.86 +1.7 4,950,740 - Pf6N2E2_4253 0.86 -0.2 4,950,910 + -0.9 4,950,957 + -1.9 4,950,958 - +0.2 4,951,245 + Pf6N2E2_4254 0.35 -0.1 4,951,246 - Pf6N2E2_4254 0.35 +0.9 4,951,249 + Pf6N2E2_4254 0.35 -0.7 4,951,249 + Pf6N2E2_4254 0.35 +0.2 4,951,250 - Pf6N2E2_4254 0.35 -1.0 4,951,250 - Pf6N2E2_4254 0.35 +0.1 4,951,296 + Pf6N2E2_4254 0.40 +0.9 4,951,297 - Pf6N2E2_4254 0.40 +0.4 4,951,297 - Pf6N2E2_4254 0.40 -0.2 4,951,315 - Pf6N2E2_4254 0.41 -0.5
Or see this region's nucleotide sequence