Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06531 and H281DRAFT_06532 are separated by 6 nucleotides H281DRAFT_06532 and H281DRAFT_06533 are separated by 29 nucleotides H281DRAFT_06533 and H281DRAFT_06534 are separated by 87 nucleotides
H281DRAFT_06531: H281DRAFT_06531 - cob(II)yrinic acid a,c-diamide reductase /5,6-dimethylbenzimidazole synthase, at 12,306 to 12,986
_06531
H281DRAFT_06532: H281DRAFT_06532 - protein of unknown function (DUF4136), at 12,993 to 13,634
_06532
H281DRAFT_06533: H281DRAFT_06533 - sensor domain CHASE2-containing protein, at 13,664 to 16,243
_06533
H281DRAFT_06534: H281DRAFT_06534 - FecR family protein, at 16,331 to 17,824
_06534
Position (kb) 13
14
15
16
17 Strain fitness (log2 ratio) -1
0
1
2 at 12.922 kb on + strand at 12.922 kb on + strand at 12.923 kb on - strand at 12.994 kb on + strand at 13.221 kb on - strand, within H281DRAFT_06532 at 13.351 kb on + strand, within H281DRAFT_06532 at 13.352 kb on - strand, within H281DRAFT_06532 at 13.352 kb on - strand, within H281DRAFT_06532 at 13.471 kb on + strand, within H281DRAFT_06532 at 13.471 kb on + strand, within H281DRAFT_06532 at 13.472 kb on - strand, within H281DRAFT_06532 at 13.535 kb on + strand, within H281DRAFT_06532 at 13.536 kb on - strand, within H281DRAFT_06532 at 13.536 kb on - strand, within H281DRAFT_06532 at 13.655 kb on - strand at 13.725 kb on + strand at 13.725 kb on + strand at 13.877 kb on + strand at 14.015 kb on + strand, within H281DRAFT_06533 at 14.029 kb on + strand, within H281DRAFT_06533 at 14.029 kb on + strand, within H281DRAFT_06533 at 14.049 kb on + strand, within H281DRAFT_06533 at 14.298 kb on - strand, within H281DRAFT_06533 at 14.881 kb on + strand, within H281DRAFT_06533 at 14.933 kb on - strand, within H281DRAFT_06533 at 15.033 kb on + strand, within H281DRAFT_06533 at 15.034 kb on - strand, within H281DRAFT_06533 at 15.307 kb on + strand, within H281DRAFT_06533 at 15.330 kb on + strand, within H281DRAFT_06533 at 15.330 kb on + strand, within H281DRAFT_06533 at 15.331 kb on - strand, within H281DRAFT_06533 at 15.385 kb on - strand, within H281DRAFT_06533 at 15.385 kb on - strand, within H281DRAFT_06533 at 15.620 kb on + strand, within H281DRAFT_06533 at 15.743 kb on - strand, within H281DRAFT_06533 at 15.840 kb on + strand, within H281DRAFT_06533 at 16.077 kb on + strand at 16.077 kb on + strand at 16.078 kb on - strand at 16.261 kb on + strand at 16.261 kb on + strand at 16.417 kb on - strand at 16.419 kb on + strand at 16.419 kb on + strand at 16.420 kb on - strand at 16.420 kb on - strand at 16.641 kb on + strand, within H281DRAFT_06534 at 16.641 kb on + strand, within H281DRAFT_06534 at 16.641 kb on + strand, within H281DRAFT_06534 at 16.641 kb on + strand, within H281DRAFT_06534 at 16.641 kb on + strand, within H281DRAFT_06534 at 16.698 kb on + strand, within H281DRAFT_06534 at 16.698 kb on + strand, within H281DRAFT_06534 at 17.109 kb on + strand, within H281DRAFT_06534
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 12,922 + +0.4 12,922 + +0.2 12,923 - +1.2 12,994 + +0.6 13,221 - H281DRAFT_06532 0.36 +0.4 13,351 + H281DRAFT_06532 0.56 +0.6 13,352 - H281DRAFT_06532 0.56 -0.3 13,352 - H281DRAFT_06532 0.56 +0.0 13,471 + H281DRAFT_06532 0.74 +0.5 13,471 + H281DRAFT_06532 0.74 +0.7 13,472 - H281DRAFT_06532 0.75 +0.0 13,535 + H281DRAFT_06532 0.84 +0.4 13,536 - H281DRAFT_06532 0.85 +0.9 13,536 - H281DRAFT_06532 0.85 +0.3 13,655 - +0.4 13,725 + +0.3 13,725 + +0.6 13,877 + -0.2 14,015 + H281DRAFT_06533 0.14 +0.8 14,029 + H281DRAFT_06533 0.14 -0.1 14,029 + H281DRAFT_06533 0.14 -0.0 14,049 + H281DRAFT_06533 0.15 +0.2 14,298 - H281DRAFT_06533 0.25 +0.8 14,881 + H281DRAFT_06533 0.47 +1.2 14,933 - H281DRAFT_06533 0.49 -0.2 15,033 + H281DRAFT_06533 0.53 +0.8 15,034 - H281DRAFT_06533 0.53 -0.5 15,307 + H281DRAFT_06533 0.64 -0.3 15,330 + H281DRAFT_06533 0.65 -0.6 15,330 + H281DRAFT_06533 0.65 +0.4 15,331 - H281DRAFT_06533 0.65 +0.4 15,385 - H281DRAFT_06533 0.67 +0.9 15,385 - H281DRAFT_06533 0.67 +1.2 15,620 + H281DRAFT_06533 0.76 +0.7 15,743 - H281DRAFT_06533 0.81 +0.9 15,840 + H281DRAFT_06533 0.84 +1.0 16,077 + +0.5 16,077 + +0.2 16,078 - +0.1 16,261 + -0.2 16,261 + +1.6 16,417 - +1.9 16,419 + +0.4 16,419 + +0.1 16,420 - -0.1 16,420 - +0.9 16,641 + H281DRAFT_06534 0.21 -0.2 16,641 + H281DRAFT_06534 0.21 +0.4 16,641 + H281DRAFT_06534 0.21 +0.6 16,641 + H281DRAFT_06534 0.21 +1.1 16,641 + H281DRAFT_06534 0.21 -1.1 16,698 + H281DRAFT_06534 0.25 +0.5 16,698 + H281DRAFT_06534 0.25 +1.4 17,109 + H281DRAFT_06534 0.52 -0.9
Or see this region's nucleotide sequence