Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05266 and H281DRAFT_05267 are separated by 11 nucleotides H281DRAFT_05267 and H281DRAFT_05268 are separated by 171 nucleotides H281DRAFT_05268 and H281DRAFT_05269 are separated by 310 nucleotides
H281DRAFT_05266: H281DRAFT_05266 - hypothetical protein, at 8,593 to 8,931
_05266
H281DRAFT_05267: H281DRAFT_05267 - 3-hydroxypropanoate dehydrogenase, at 8,943 to 9,527
_05267
H281DRAFT_05268: H281DRAFT_05268 - Alkylated DNA repair dioxygenase AlkB, at 9,699 to 10,313
_05268
H281DRAFT_05269: H281DRAFT_05269 - monosaccharide ABC transporter substrate-binding protein, CUT2 family, at 10,624 to 11,610
_05269
Position (kb)
9
10
11 Strain fitness (log2 ratio)
-1
0
1
2 at 8.723 kb on - strand, within H281DRAFT_05266 at 8.911 kb on + strand at 8.912 kb on - strand at 9.143 kb on - strand, within H281DRAFT_05267 at 9.154 kb on - strand, within H281DRAFT_05267 at 9.154 kb on - strand, within H281DRAFT_05267 at 9.476 kb on - strand at 9.476 kb on - strand at 9.531 kb on - strand at 9.583 kb on - strand at 9.648 kb on + strand at 9.649 kb on - strand at 9.651 kb on + strand at 9.652 kb on - strand at 9.699 kb on - strand at 9.699 kb on - strand at 9.710 kb on - strand at 9.821 kb on + strand, within H281DRAFT_05268 at 9.821 kb on + strand, within H281DRAFT_05268 at 9.831 kb on - strand, within H281DRAFT_05268 at 9.894 kb on + strand, within H281DRAFT_05268 at 9.894 kb on + strand, within H281DRAFT_05268 at 9.894 kb on + strand, within H281DRAFT_05268 at 9.894 kb on + strand, within H281DRAFT_05268 at 9.901 kb on - strand, within H281DRAFT_05268 at 9.952 kb on + strand, within H281DRAFT_05268 at 9.953 kb on - strand, within H281DRAFT_05268 at 10.032 kb on - strand at 10.127 kb on + strand, within H281DRAFT_05268 at 10.128 kb on - strand, within H281DRAFT_05268 at 10.128 kb on - strand, within H281DRAFT_05268 at 10.215 kb on - strand, within H281DRAFT_05268 at 10.259 kb on + strand at 10.260 kb on - strand at 10.371 kb on + strand at 10.371 kb on + strand at 10.372 kb on - strand at 10.460 kb on + strand at 10.461 kb on - strand at 10.473 kb on + strand at 10.474 kb on - strand at 10.505 kb on + strand at 10.505 kb on + strand at 10.540 kb on - strand at 10.632 kb on + strand at 10.632 kb on + strand at 10.633 kb on - strand at 10.690 kb on - strand at 10.888 kb on + strand, within H281DRAFT_05269 at 11.098 kb on + strand, within H281DRAFT_05269 at 11.101 kb on - strand, within H281DRAFT_05269 at 11.309 kb on + strand, within H281DRAFT_05269
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 8,723 - H281DRAFT_05266 0.38 +0.8 8,911 + +0.6 8,912 - +0.5 9,143 - H281DRAFT_05267 0.34 +0.3 9,154 - H281DRAFT_05267 0.36 +0.3 9,154 - H281DRAFT_05267 0.36 +2.0 9,476 - +0.4 9,476 - +0.3 9,531 - +0.7 9,583 - +1.4 9,648 + -0.1 9,649 - +0.1 9,651 + +0.5 9,652 - -0.0 9,699 - -0.4 9,699 - -0.4 9,710 - -1.1 9,821 + H281DRAFT_05268 0.20 -0.0 9,821 + H281DRAFT_05268 0.20 -0.4 9,831 - H281DRAFT_05268 0.21 +0.8 9,894 + H281DRAFT_05268 0.32 +0.4 9,894 + H281DRAFT_05268 0.32 +0.1 9,894 + H281DRAFT_05268 0.32 -0.7 9,894 + H281DRAFT_05268 0.32 +0.1 9,901 - H281DRAFT_05268 0.33 -0.0 9,952 + H281DRAFT_05268 0.41 +0.1 9,953 - H281DRAFT_05268 0.41 -0.7 10,032 - +0.2 10,127 + H281DRAFT_05268 0.70 -1.1 10,128 - H281DRAFT_05268 0.70 +0.4 10,128 - H281DRAFT_05268 0.70 -0.3 10,215 - H281DRAFT_05268 0.84 -0.3 10,259 + -0.3 10,260 - +1.2 10,371 + +0.9 10,371 + -0.0 10,372 - +0.7 10,460 + +0.1 10,461 - -1.6 10,473 + -0.1 10,474 - +0.4 10,505 + +0.3 10,505 + -0.7 10,540 - -0.9 10,632 + +0.3 10,632 + +0.4 10,633 - -0.6 10,690 - +0.3 10,888 + H281DRAFT_05269 0.27 -0.5 11,098 + H281DRAFT_05269 0.48 -0.6 11,101 - H281DRAFT_05269 0.48 -0.0 11,309 + H281DRAFT_05269 0.69 -0.1
Or see this region's nucleotide sequence