Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_05163

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_05162 and H281DRAFT_05163 are separated by 184 nucleotidesH281DRAFT_05163 and H281DRAFT_05164 are separated by 537 nucleotides H281DRAFT_05162: H281DRAFT_05162 - Uncharacterized membrane protein, at 115,522 to 116,715 _05162 H281DRAFT_05163: H281DRAFT_05163 - 5-hydroxyisourate hydrolase, at 116,900 to 117,253 _05163 H281DRAFT_05164: H281DRAFT_05164 - Cytosine/adenosine deaminase, at 117,791 to 119,188 _05164 Position (kb) 116 117 118Strain fitness (log2 ratio) -2 -1 0 1at 115.961 kb on + strand, within H281DRAFT_05162at 115.962 kb on - strand, within H281DRAFT_05162at 115.973 kb on + strand, within H281DRAFT_05162at 115.974 kb on - strand, within H281DRAFT_05162at 115.974 kb on - strand, within H281DRAFT_05162at 116.027 kb on + strand, within H281DRAFT_05162at 116.066 kb on + strand, within H281DRAFT_05162at 116.187 kb on - strand, within H281DRAFT_05162at 116.263 kb on + strand, within H281DRAFT_05162at 116.263 kb on + strand, within H281DRAFT_05162at 116.264 kb on - strand, within H281DRAFT_05162at 116.303 kb on + strand, within H281DRAFT_05162at 116.391 kb on - strand, within H281DRAFT_05162at 116.510 kb on + strand, within H281DRAFT_05162at 116.511 kb on - strand, within H281DRAFT_05162at 116.511 kb on - strand, within H281DRAFT_05162at 116.511 kb on - strand, within H281DRAFT_05162at 116.525 kb on + strand, within H281DRAFT_05162at 116.543 kb on - strand, within H281DRAFT_05162at 116.628 kb on - strandat 117.305 kb on + strandat 117.342 kb on - strandat 117.387 kb on - strandat 117.387 kb on - strandat 117.387 kb on - strandat 117.429 kb on + strandat 117.430 kb on - strandat 117.430 kb on - strandat 117.497 kb on + strandat 117.497 kb on + strandat 117.539 kb on + strandat 117.539 kb on + strandat 117.539 kb on + strandat 117.540 kb on - strandat 117.680 kb on + strandat 117.680 kb on + strandat 117.681 kb on - strandat 117.911 kb on + strandat 117.911 kb on + strandat 117.911 kb on + strandat 117.911 kb on + strandat 117.912 kb on - strandat 117.912 kb on - strandat 117.912 kb on - strandat 118.037 kb on + strand, within H281DRAFT_05164at 118.037 kb on + strand, within H281DRAFT_05164at 118.038 kb on - strand, within H281DRAFT_05164at 118.038 kb on - strand, within H281DRAFT_05164at 118.107 kb on - strand, within H281DRAFT_05164at 118.211 kb on + strand, within H281DRAFT_05164at 118.211 kb on + strand, within H281DRAFT_05164at 118.212 kb on - strand, within H281DRAFT_05164at 118.212 kb on - strand, within H281DRAFT_05164at 118.212 kb on - strand, within H281DRAFT_05164at 118.213 kb on + strand, within H281DRAFT_05164at 118.214 kb on - strand, within H281DRAFT_05164at 118.214 kb on - strand, within H281DRAFT_05164at 118.214 kb on - strand, within H281DRAFT_05164at 118.214 kb on - strand, within H281DRAFT_05164at 118.214 kb on - strand, within H281DRAFT_05164at 118.214 kb on - strand, within H281DRAFT_05164at 118.218 kb on - strand, within H281DRAFT_05164at 118.218 kb on - strand, within H281DRAFT_05164

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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115,961 + H281DRAFT_05162 0.37 +0.5
115,962 - H281DRAFT_05162 0.37 -2.0
115,973 + H281DRAFT_05162 0.38 +0.3
115,974 - H281DRAFT_05162 0.38 -0.2
115,974 - H281DRAFT_05162 0.38 +0.1
116,027 + H281DRAFT_05162 0.42 +0.1
116,066 + H281DRAFT_05162 0.46 +1.1
116,187 - H281DRAFT_05162 0.56 +0.2
116,263 + H281DRAFT_05162 0.62 +0.8
116,263 + H281DRAFT_05162 0.62 -0.1
116,264 - H281DRAFT_05162 0.62 +1.6
116,303 + H281DRAFT_05162 0.65 -0.4
116,391 - H281DRAFT_05162 0.73 +0.9
116,510 + H281DRAFT_05162 0.83 +0.4
116,511 - H281DRAFT_05162 0.83 -0.0
116,511 - H281DRAFT_05162 0.83 +0.7
116,511 - H281DRAFT_05162 0.83 -0.4
116,525 + H281DRAFT_05162 0.84 +0.6
116,543 - H281DRAFT_05162 0.86 +0.5
116,628 - -0.2
117,305 + -0.1
117,342 - +1.3
117,387 - -0.6
117,387 - -0.0
117,387 - -0.6
117,429 + +0.2
117,430 - -0.4
117,430 - -0.5
117,497 + +0.7
117,497 + +0.3
117,539 + +1.5
117,539 + -0.0
117,539 + +0.7
117,540 - -0.4
117,680 + +1.0
117,680 + -0.1
117,681 - -0.7
117,911 + +0.3
117,911 + +0.2
117,911 + +0.1
117,911 + +0.3
117,912 - +0.3
117,912 - -0.2
117,912 - +0.2
118,037 + H281DRAFT_05164 0.18 +0.1
118,037 + H281DRAFT_05164 0.18 +0.5
118,038 - H281DRAFT_05164 0.18 +0.5
118,038 - H281DRAFT_05164 0.18 -0.1
118,107 - H281DRAFT_05164 0.23 -0.6
118,211 + H281DRAFT_05164 0.30 +0.8
118,211 + H281DRAFT_05164 0.30 -0.9
118,212 - H281DRAFT_05164 0.30 -0.3
118,212 - H281DRAFT_05164 0.30 +0.4
118,212 - H281DRAFT_05164 0.30 -1.1
118,213 + H281DRAFT_05164 0.30 +0.7
118,214 - H281DRAFT_05164 0.30 -0.3
118,214 - H281DRAFT_05164 0.30 +0.1
118,214 - H281DRAFT_05164 0.30 -0.3
118,214 - H281DRAFT_05164 0.30 +0.8
118,214 - H281DRAFT_05164 0.30 +0.7
118,214 - H281DRAFT_05164 0.30 +0.9
118,218 - H281DRAFT_05164 0.31 +0.6
118,218 - H281DRAFT_05164 0.31 -1.6

Or see this region's nucleotide sequence