Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_02700

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_02699 and H281DRAFT_02700 are separated by 209 nucleotidesH281DRAFT_02700 and H281DRAFT_02701 are separated by 613 nucleotides H281DRAFT_02699: H281DRAFT_02699 - filamentous hemagglutinin family N-terminal domain-containing protein, at 279,324 to 281,738 _02699 H281DRAFT_02700: H281DRAFT_02700 - feruloyl esterase, at 281,948 to 283,648 _02700 H281DRAFT_02701: H281DRAFT_02701 - dihydroxyacetone kinase, C-terminal domain, at 284,262 to 284,888 _02701 Position (kb) 281 282 283 284Strain fitness (log2 ratio) -1 0 1at 281.584 kb on + strandat 281.738 kb on + strandat 281.738 kb on + strandat 281.739 kb on - strandat 281.739 kb on - strandat 281.998 kb on - strandat 282.439 kb on - strand, within H281DRAFT_02700at 283.043 kb on - strand, within H281DRAFT_02700at 283.407 kb on + strand, within H281DRAFT_02700at 283.627 kb on + strandat 283.887 kb on - strandat 284.086 kb on + strandat 284.191 kb on + strandat 284.191 kb on + strandat 284.293 kb on - strandat 284.390 kb on + strand, within H281DRAFT_02701

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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281,584 + -0.1
281,738 + +0.3
281,738 + +0.7
281,739 - -0.7
281,739 - -0.8
281,998 - -0.2
282,439 - H281DRAFT_02700 0.29 +1.2
283,043 - H281DRAFT_02700 0.64 +0.4
283,407 + H281DRAFT_02700 0.86 +1.2
283,627 + -1.3
283,887 - +0.4
284,086 + -1.1
284,191 + +0.5
284,191 + +0.3
284,293 - -0.2
284,390 + H281DRAFT_02701 0.20 +0.1

Or see this region's nucleotide sequence