Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02545 and H281DRAFT_02546 are separated by 187 nucleotides H281DRAFT_02546 and H281DRAFT_02547 are separated by 82 nucleotides H281DRAFT_02547 and H281DRAFT_02548 are separated by 72 nucleotides H281DRAFT_02548 and H281DRAFT_02549 are separated by 35 nucleotides
H281DRAFT_02545: H281DRAFT_02545 - tRNA A37 threonylcarbamoyladenosine synthetase subunit TsaC/SUA5/YrdC, at 120,141 to 120,875
_02545
H281DRAFT_02546: H281DRAFT_02546 - transcriptional regulator, TetR family, at 121,063 to 121,629
_02546
H281DRAFT_02547: H281DRAFT_02547 - Nucleoside-diphosphate-sugar epimerase, at 121,712 to 122,605
_02547
H281DRAFT_02548: H281DRAFT_02548 - Uncharacterized membrane protein YoaK, UPF0700 family, at 122,678 to 123,406
_02548
H281DRAFT_02549: H281DRAFT_02549 - putative oxidoreductase, at 123,442 to 123,849
_02549
Position (kb) 121
122
123 Strain fitness (log2 ratio) -1
0
1
2 at 120.749 kb on + strand, within H281DRAFT_02545 at 120.776 kb on - strand, within H281DRAFT_02545 at 120.776 kb on - strand, within H281DRAFT_02545 at 120.789 kb on + strand, within H281DRAFT_02545 at 120.898 kb on + strand at 120.910 kb on - strand at 121.033 kb on + strand at 121.328 kb on + strand, within H281DRAFT_02546 at 121.490 kb on + strand, within H281DRAFT_02546 at 121.674 kb on + strand at 121.719 kb on + strand at 121.719 kb on + strand at 122.011 kb on + strand, within H281DRAFT_02547 at 122.126 kb on + strand, within H281DRAFT_02547 at 122.126 kb on + strand, within H281DRAFT_02547 at 122.126 kb on + strand, within H281DRAFT_02547 at 122.262 kb on - strand, within H281DRAFT_02547 at 122.592 kb on - strand at 122.626 kb on - strand at 122.715 kb on - strand at 122.715 kb on - strand at 122.720 kb on + strand at 122.721 kb on - strand at 123.099 kb on + strand, within H281DRAFT_02548 at 123.148 kb on - strand, within H281DRAFT_02548 at 123.148 kb on - strand, within H281DRAFT_02548
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 120,749 + H281DRAFT_02545 0.83 +0.1 120,776 - H281DRAFT_02545 0.86 -0.1 120,776 - H281DRAFT_02545 0.86 -0.0 120,789 + H281DRAFT_02545 0.88 +1.5 120,898 + -0.0 120,910 - -1.5 121,033 + -0.5 121,328 + H281DRAFT_02546 0.47 +0.4 121,490 + H281DRAFT_02546 0.75 -0.6 121,674 + +0.2 121,719 + +0.6 121,719 + -1.3 122,011 + H281DRAFT_02547 0.33 -0.2 122,126 + H281DRAFT_02547 0.46 +1.8 122,126 + H281DRAFT_02547 0.46 +0.6 122,126 + H281DRAFT_02547 0.46 +0.2 122,262 - H281DRAFT_02547 0.62 +0.6 122,592 - -0.5 122,626 - -1.6 122,715 - +0.1 122,715 - -0.4 122,720 + +1.5 122,721 - -0.0 123,099 + H281DRAFT_02548 0.58 -0.3 123,148 - H281DRAFT_02548 0.64 +0.4 123,148 - H281DRAFT_02548 0.64 -0.4
Or see this region's nucleotide sequence