Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01067 and H281DRAFT_01068 overlap by 4 nucleotides H281DRAFT_01068 and H281DRAFT_01069 are separated by 10 nucleotides H281DRAFT_01069 and H281DRAFT_01070 are separated by 336 nucleotides
H281DRAFT_01067: H281DRAFT_01067 - NitT/TauT family transport system ATP-binding protein, at 1,198,616 to 1,199,440
_01067
H281DRAFT_01068: H281DRAFT_01068 - NitT/TauT family transport system permease protein, at 1,199,437 to 1,200,285
_01068
H281DRAFT_01069: H281DRAFT_01069 - Cytosine/adenosine deaminase, at 1,200,296 to 1,201,720
_01069
H281DRAFT_01070: H281DRAFT_01070 - methyl-accepting chemotaxis sensory transducer with Cache sensor, at 1,202,057 to 1,203,943
_01070
Position (kb) 1200
1201
1202 Strain fitness (log2 ratio) -1
0
1 at 1199.558 kb on + strand, within H281DRAFT_01068 at 1199.911 kb on - strand, within H281DRAFT_01068 at 1200.683 kb on + strand, within H281DRAFT_01069 at 1200.845 kb on + strand, within H281DRAFT_01069 at 1201.719 kb on - strand at 1201.790 kb on + strand at 1201.791 kb on - strand at 1202.016 kb on + strand at 1202.315 kb on + strand, within H281DRAFT_01070 at 1202.489 kb on + strand, within H281DRAFT_01070
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 1,199,558 + H281DRAFT_01068 0.14 -0.2 1,199,911 - H281DRAFT_01068 0.56 -0.2 1,200,683 + H281DRAFT_01069 0.27 +1.6 1,200,845 + H281DRAFT_01069 0.39 +1.0 1,201,719 - -1.7 1,201,790 + +0.2 1,201,791 - +0.4 1,202,016 + +0.0 1,202,315 + H281DRAFT_01070 0.14 +0.5 1,202,489 + H281DRAFT_01070 0.23 -0.8
Or see this region's nucleotide sequence