Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00995 and H281DRAFT_00996 are separated by 194 nucleotides H281DRAFT_00996 and H281DRAFT_00997 are separated by 41 nucleotides H281DRAFT_00997 and H281DRAFT_00998 are separated by 656 nucleotides
H281DRAFT_00995: H281DRAFT_00995 - transcriptional regulator, LysR family, at 1,117,372 to 1,118,373
_00995
H281DRAFT_00996: H281DRAFT_00996 - ChrR Cupin-like domain-containing protein, at 1,118,568 to 1,118,978
_00996
H281DRAFT_00997: H281DRAFT_00997 - amino acid/amide ABC transporter substrate-binding protein, HAAT family, at 1,119,020 to 1,120,171
_00997
H281DRAFT_00998: H281DRAFT_00998 - outer membrane protein, multidrug efflux system, at 1,120,828 to 1,122,285
_00998
Position (kb) 1119
1120
1121 Strain fitness (log2 ratio) -1
0
1 at 1118.288 kb on - strand at 1118.529 kb on + strand at 1118.897 kb on + strand, within H281DRAFT_00996 at 1119.342 kb on - strand, within H281DRAFT_00997 at 1119.811 kb on + strand, within H281DRAFT_00997 at 1120.520 kb on + strand at 1120.633 kb on + strand at 1120.860 kb on - strand at 1120.922 kb on + strand at 1120.977 kb on - strand, within H281DRAFT_00998 at 1121.051 kb on + strand, within H281DRAFT_00998
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 1,118,288 - -0.2 1,118,529 + +0.2 1,118,897 + H281DRAFT_00996 0.80 -0.2 1,119,342 - H281DRAFT_00997 0.28 +0.2 1,119,811 + H281DRAFT_00997 0.69 +1.0 1,120,520 + +0.1 1,120,633 + +0.0 1,120,860 - +0.6 1,120,922 + -0.6 1,120,977 - H281DRAFT_00998 0.10 +1.0 1,121,051 + H281DRAFT_00998 0.15 -0.7
Or see this region's nucleotide sequence