Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2379 and DvMF_2380 are separated by 19 nucleotides DvMF_2380 and DvMF_2381 are separated by 236 nucleotides
DvMF_2379: DvMF_2379 - ABC transporter related (RefSeq), at 3,005,797 to 3,007,779
_2379
DvMF_2380: DvMF_2380 - NUDIX hydrolase (RefSeq), at 3,007,799 to 3,008,308
_2380
DvMF_2381: DvMF_2381 - protein of unknown function DUF606 (RefSeq), at 3,008,545 to 3,008,985
_2381
Position (kb)
3007
3008
3009 Strain fitness (log2 ratio)
-1
0
1 at 3006.891 kb on + strand, within DvMF_2379 at 3006.899 kb on - strand, within DvMF_2379 at 3006.936 kb on + strand, within DvMF_2379 at 3006.945 kb on - strand, within DvMF_2379 at 3006.989 kb on + strand, within DvMF_2379 at 3006.989 kb on - strand, within DvMF_2379 at 3007.071 kb on + strand, within DvMF_2379 at 3007.542 kb on + strand, within DvMF_2379 at 3007.590 kb on + strand at 3007.601 kb on + strand at 3007.664 kb on - strand at 3007.781 kb on - strand at 3008.025 kb on + strand, within DvMF_2380 at 3008.146 kb on - strand, within DvMF_2380 at 3008.186 kb on - strand, within DvMF_2380 at 3008.278 kb on - strand at 3008.282 kb on + strand at 3008.290 kb on - strand at 3008.561 kb on + strand at 3008.585 kb on + strand at 3008.593 kb on - strand, within DvMF_2381 at 3008.633 kb on + strand, within DvMF_2381 at 3008.831 kb on - strand, within DvMF_2381 at 3008.903 kb on + strand, within DvMF_2381 at 3009.020 kb on - strand at 3009.080 kb on - strand at 3009.245 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 3,006,891 + DvMF_2379 0.55 +0.1 3,006,899 - DvMF_2379 0.56 +0.1 3,006,936 + DvMF_2379 0.57 -0.0 3,006,945 - DvMF_2379 0.58 -0.7 3,006,989 + DvMF_2379 0.60 -0.1 3,006,989 - DvMF_2379 0.60 +0.3 3,007,071 + DvMF_2379 0.64 -0.6 3,007,542 + DvMF_2379 0.88 -1.2 3,007,590 + -0.1 3,007,601 + -0.6 3,007,664 - -0.4 3,007,781 - +0.1 3,008,025 + DvMF_2380 0.44 -1.5 3,008,146 - DvMF_2380 0.68 -0.7 3,008,186 - DvMF_2380 0.76 -0.6 3,008,278 - -0.4 3,008,282 + -0.4 3,008,290 - -0.2 3,008,561 + -0.6 3,008,585 + -0.4 3,008,593 - DvMF_2381 0.11 -1.0 3,008,633 + DvMF_2381 0.20 -0.6 3,008,831 - DvMF_2381 0.65 +0.1 3,008,903 + DvMF_2381 0.81 -0.3 3,009,020 - -0.0 3,009,080 - -0.5 3,009,245 + +0.3
Or see this region's nucleotide sequence