Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1871 and DvMF_R0050 are separated by 249 nucleotides DvMF_R0050 and DvMF_1872 are separated by 75 nucleotides DvMF_1872 and DvMF_1873 are separated by 410 nucleotides
DvMF_1871: DvMF_1871 - Rhodanese domain protein (RefSeq), at 2,297,570 to 2,298,598
_1871
DvMF_R0050: DvMF_R0050 - tRNA-Pro (RefSeq), at 2,298,848 to 2,298,924
_R0050
DvMF_1872: DvMF_1872 - Acetamidase/Formamidase (RefSeq), at 2,299,000 to 2,300,289
_1872
DvMF_1873: DvMF_1873 - Radical SAM domain protein (RefSeq), at 2,300,700 to 2,302,052
_1873
Position (kb)
2298
2299
2300
2301 Strain fitness (log2 ratio)
-1
0
1
2 at 2298.040 kb on - strand, within DvMF_1871 at 2298.612 kb on - strand at 2298.716 kb on - strand at 2298.743 kb on + strand at 2299.016 kb on + strand at 2299.103 kb on + strand at 2299.211 kb on + strand, within DvMF_1872 at 2299.234 kb on - strand, within DvMF_1872 at 2299.484 kb on - strand, within DvMF_1872 at 2299.664 kb on + strand, within DvMF_1872 at 2299.816 kb on - strand, within DvMF_1872 at 2299.820 kb on - strand, within DvMF_1872 at 2299.983 kb on + strand, within DvMF_1872 at 2300.102 kb on - strand, within DvMF_1872 at 2300.159 kb on - strand, within DvMF_1872 at 2300.274 kb on - strand at 2300.451 kb on + strand at 2300.722 kb on + strand at 2300.792 kb on + strand at 2300.921 kb on - strand, within DvMF_1873 at 2301.076 kb on + strand, within DvMF_1873 at 2301.076 kb on + strand, within DvMF_1873 at 2301.076 kb on + strand, within DvMF_1873 at 2301.076 kb on + strand, within DvMF_1873 at 2301.084 kb on - strand, within DvMF_1873 at 2301.113 kb on + strand, within DvMF_1873 at 2301.197 kb on - strand, within DvMF_1873 at 2301.264 kb on + strand, within DvMF_1873
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,298,040 - DvMF_1871 0.46 -0.8 2,298,612 - -0.4 2,298,716 - +1.8 2,298,743 + -0.9 2,299,016 + -0.7 2,299,103 + -0.8 2,299,211 + DvMF_1872 0.16 -0.2 2,299,234 - DvMF_1872 0.18 -0.3 2,299,484 - DvMF_1872 0.38 -0.4 2,299,664 + DvMF_1872 0.51 -0.4 2,299,816 - DvMF_1872 0.63 -0.3 2,299,820 - DvMF_1872 0.64 -1.5 2,299,983 + DvMF_1872 0.76 +0.1 2,300,102 - DvMF_1872 0.85 -0.9 2,300,159 - DvMF_1872 0.90 -1.3 2,300,274 - -0.8 2,300,451 + -0.4 2,300,722 + +1.0 2,300,792 + -0.4 2,300,921 - DvMF_1873 0.16 -0.3 2,301,076 + DvMF_1873 0.28 +1.1 2,301,076 + DvMF_1873 0.28 -0.5 2,301,076 + DvMF_1873 0.28 -0.8 2,301,076 + DvMF_1873 0.28 -0.6 2,301,084 - DvMF_1873 0.28 -0.6 2,301,113 + DvMF_1873 0.31 -0.1 2,301,197 - DvMF_1873 0.37 -0.5 2,301,264 + DvMF_1873 0.42 +0.1
Or see this region's nucleotide sequence