Experiment: Protocatechuic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06428 and H281DRAFT_06429 are separated by 92 nucleotides H281DRAFT_06429 and H281DRAFT_06430 are separated by 55 nucleotides H281DRAFT_06430 and H281DRAFT_06431 are separated by 548 nucleotides
H281DRAFT_06428: H281DRAFT_06428 - hypothetical protein, at 30,260 to 30,385
_06428
H281DRAFT_06429: H281DRAFT_06429 - molybdenum-pterin binding domain-containing protein, at 30,478 to 30,903
_06429
H281DRAFT_06430: H281DRAFT_06430 - hypothetical protein, at 30,959 to 31,102
_06430
H281DRAFT_06431: H281DRAFT_06431 - oxidoreductase alpha (molybdopterin) subunit, at 31,651 to 33,927
_06431
Position (kb) 30
31
32 Strain fitness (log2 ratio) -2
-1
0
1 at 30.078 kb on + strand at 30.079 kb on - strand at 30.079 kb on - strand at 30.167 kb on - strand at 30.381 kb on - strand at 30.394 kb on - strand at 30.397 kb on - strand at 30.417 kb on - strand at 30.423 kb on + strand at 30.423 kb on + strand at 30.594 kb on + strand, within H281DRAFT_06429 at 30.604 kb on - strand, within H281DRAFT_06429 at 30.668 kb on + strand, within H281DRAFT_06429 at 30.701 kb on + strand, within H281DRAFT_06429 at 30.702 kb on - strand, within H281DRAFT_06429 at 30.702 kb on - strand, within H281DRAFT_06429 at 31.080 kb on + strand, within H281DRAFT_06430 at 31.233 kb on + strand at 31.287 kb on - strand at 31.327 kb on - strand at 31.327 kb on - strand at 31.482 kb on - strand at 31.531 kb on + strand at 31.885 kb on - strand at 31.935 kb on + strand, within H281DRAFT_06431 at 32.026 kb on - strand, within H281DRAFT_06431
Per-strain Table
Position Strand Gene LocusTag Fraction Protocatechuic Acid (C) remove 30,078 + -0.1 30,079 - +0.2 30,079 - -0.1 30,167 - -1.0 30,381 - +0.2 30,394 - +0.9 30,397 - -0.4 30,417 - +1.1 30,423 + -0.7 30,423 + -0.0 30,594 + H281DRAFT_06429 0.27 +0.2 30,604 - H281DRAFT_06429 0.30 +0.6 30,668 + H281DRAFT_06429 0.45 -2.4 30,701 + H281DRAFT_06429 0.52 -2.1 30,702 - H281DRAFT_06429 0.53 +0.8 30,702 - H281DRAFT_06429 0.53 +0.3 31,080 + H281DRAFT_06430 0.84 +0.6 31,233 + -1.9 31,287 - +0.5 31,327 - +0.5 31,327 - -1.1 31,482 - +0.2 31,531 + -0.6 31,885 - +0.1 31,935 + H281DRAFT_06431 0.12 -0.3 32,026 - H281DRAFT_06431 0.16 +0.3
Or see this region's nucleotide sequence