Experiment: Protocatechuic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06027 and H281DRAFT_06028 are separated by 200 nucleotides H281DRAFT_06028 and H281DRAFT_06029 are separated by 218 nucleotides
H281DRAFT_06027: H281DRAFT_06027 - AMP nucleosidase, at 31,978 to 33,504
_06027
H281DRAFT_06028: H281DRAFT_06028 - hypothetical protein, at 33,705 to 34,100
_06028
H281DRAFT_06029: H281DRAFT_06029 - homoserine kinase, at 34,319 to 35,314
_06029
Position (kb) 33
34
35 Strain fitness (log2 ratio) -1
0
1
2 at 32.720 kb on + strand, within H281DRAFT_06027 at 32.720 kb on + strand, within H281DRAFT_06027 at 32.721 kb on - strand, within H281DRAFT_06027 at 32.794 kb on - strand, within H281DRAFT_06027 at 32.794 kb on - strand, within H281DRAFT_06027 at 32.837 kb on + strand, within H281DRAFT_06027 at 32.846 kb on + strand, within H281DRAFT_06027 at 32.847 kb on - strand, within H281DRAFT_06027 at 32.864 kb on + strand, within H281DRAFT_06027 at 32.865 kb on - strand, within H281DRAFT_06027 at 32.865 kb on - strand, within H281DRAFT_06027 at 32.865 kb on - strand, within H281DRAFT_06027 at 32.865 kb on - strand, within H281DRAFT_06027 at 32.897 kb on + strand, within H281DRAFT_06027 at 32.981 kb on + strand, within H281DRAFT_06027 at 32.982 kb on - strand, within H281DRAFT_06027 at 32.982 kb on - strand, within H281DRAFT_06027 at 32.982 kb on - strand, within H281DRAFT_06027 at 32.998 kb on - strand, within H281DRAFT_06027 at 33.163 kb on - strand, within H281DRAFT_06027 at 33.191 kb on + strand, within H281DRAFT_06027 at 33.191 kb on + strand, within H281DRAFT_06027 at 33.192 kb on - strand, within H281DRAFT_06027 at 33.192 kb on - strand, within H281DRAFT_06027 at 33.216 kb on + strand, within H281DRAFT_06027 at 33.398 kb on + strand at 33.399 kb on - strand at 33.535 kb on + strand at 33.535 kb on + strand at 33.536 kb on - strand at 33.638 kb on + strand at 33.951 kb on + strand, within H281DRAFT_06028 at 34.008 kb on + strand, within H281DRAFT_06028
Per-strain Table
Position Strand Gene LocusTag Fraction Protocatechuic Acid (C) remove 32,720 + H281DRAFT_06027 0.49 +1.5 32,720 + H281DRAFT_06027 0.49 +0.9 32,721 - H281DRAFT_06027 0.49 +1.3 32,794 - H281DRAFT_06027 0.53 +1.2 32,794 - H281DRAFT_06027 0.53 +1.6 32,837 + H281DRAFT_06027 0.56 +2.2 32,846 + H281DRAFT_06027 0.57 +1.1 32,847 - H281DRAFT_06027 0.57 +0.9 32,864 + H281DRAFT_06027 0.58 +0.4 32,865 - H281DRAFT_06027 0.58 +2.6 32,865 - H281DRAFT_06027 0.58 -0.1 32,865 - H281DRAFT_06027 0.58 +1.1 32,865 - H281DRAFT_06027 0.58 +1.2 32,897 + H281DRAFT_06027 0.60 +0.8 32,981 + H281DRAFT_06027 0.66 +1.0 32,982 - H281DRAFT_06027 0.66 +0.6 32,982 - H281DRAFT_06027 0.66 +1.9 32,982 - H281DRAFT_06027 0.66 +1.8 32,998 - H281DRAFT_06027 0.67 +1.3 33,163 - H281DRAFT_06027 0.78 +2.2 33,191 + H281DRAFT_06027 0.79 +1.4 33,191 + H281DRAFT_06027 0.79 +0.6 33,192 - H281DRAFT_06027 0.80 +1.9 33,192 - H281DRAFT_06027 0.80 +0.9 33,216 + H281DRAFT_06027 0.81 +1.0 33,398 + +1.2 33,399 - +0.5 33,535 + +0.0 33,535 + +1.2 33,536 - +0.1 33,638 + -0.0 33,951 + H281DRAFT_06028 0.62 +0.1 34,008 + H281DRAFT_06028 0.77 -0.1
Or see this region's nucleotide sequence