Experiment: Protocatechuic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06009 and H281DRAFT_06010 are separated by 75 nucleotides H281DRAFT_06010 and H281DRAFT_06011 are separated by 234 nucleotides H281DRAFT_06011 and H281DRAFT_06012 are separated by 68 nucleotides
H281DRAFT_06009: H281DRAFT_06009 - DNA primase, at 11,497 to 13,365
_06009
H281DRAFT_06010: H281DRAFT_06010 - hypothetical protein, at 13,441 to 13,887
_06010
H281DRAFT_06011: H281DRAFT_06011 - SSU ribosomal protein S21P, at 14,122 to 14,334
_06011
H281DRAFT_06012: H281DRAFT_06012 - hypothetical protein, at 14,403 to 15,620
_06012
Position (kb) 13
14 Strain fitness (log2 ratio) -1
0
1 at 13.623 kb on - strand, within H281DRAFT_06010 at 13.623 kb on - strand, within H281DRAFT_06010 at 13.623 kb on - strand, within H281DRAFT_06010 at 13.623 kb on - strand, within H281DRAFT_06010 at 13.858 kb on - strand at 13.889 kb on - strand at 13.889 kb on - strand at 13.889 kb on - strand at 14.223 kb on - strand, within H281DRAFT_06011 at 14.370 kb on - strand at 14.372 kb on - strand at 14.419 kb on + strand at 14.420 kb on - strand at 14.420 kb on - strand at 14.420 kb on - strand at 14.476 kb on + strand at 14.496 kb on + strand at 14.521 kb on + strand at 14.522 kb on - strand at 14.808 kb on + strand, within H281DRAFT_06012 at 14.809 kb on - strand, within H281DRAFT_06012 at 14.809 kb on - strand, within H281DRAFT_06012 at 14.872 kb on + strand, within H281DRAFT_06012
Per-strain Table
Position Strand Gene LocusTag Fraction Protocatechuic Acid (C) remove 13,623 - H281DRAFT_06010 0.41 -0.5 13,623 - H281DRAFT_06010 0.41 -0.3 13,623 - H281DRAFT_06010 0.41 -0.7 13,623 - H281DRAFT_06010 0.41 -0.0 13,858 - -0.3 13,889 - +0.2 13,889 - +0.9 13,889 - -1.2 14,223 - H281DRAFT_06011 0.47 +0.2 14,370 - +0.0 14,372 - +0.3 14,419 + +1.2 14,420 - +1.5 14,420 - +0.5 14,420 - +1.4 14,476 + +0.2 14,496 + -0.4 14,521 + +1.5 14,522 - +0.6 14,808 + H281DRAFT_06012 0.33 +0.1 14,809 - H281DRAFT_06012 0.33 +0.5 14,809 - H281DRAFT_06012 0.33 -0.0 14,872 + H281DRAFT_06012 0.39 +0.4
Or see this region's nucleotide sequence