Experiment: Protocatechuic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03059 and H281DRAFT_03060 are separated by 14 nucleotides H281DRAFT_03060 and H281DRAFT_03061 are separated by 303 nucleotides H281DRAFT_03061 and H281DRAFT_03062 are separated by 186 nucleotides
H281DRAFT_03059: H281DRAFT_03059 - two-component system, chemotaxis family, CheB/CheR fusion protein, at 90,523 to 93,663
_03059
H281DRAFT_03060: H281DRAFT_03060 - putative addiction module antidote protein, CC2985 family, at 93,678 to 93,899
_03060
H281DRAFT_03061: H281DRAFT_03061 - hypothetical protein, at 94,203 to 94,553
_03061
H281DRAFT_03062: H281DRAFT_03062 - Uncharacterized conserved protein YndB, AHSA1/START domain, at 94,740 to 95,186
_03062
Position (kb) 93
94 Strain fitness (log2 ratio) -1
0
1 at 92.871 kb on - strand, within H281DRAFT_03059 at 92.941 kb on - strand, within H281DRAFT_03059 at 92.942 kb on + strand, within H281DRAFT_03059 at 93.061 kb on - strand, within H281DRAFT_03059 at 93.220 kb on - strand, within H281DRAFT_03059 at 93.220 kb on - strand, within H281DRAFT_03059 at 93.407 kb on - strand at 93.432 kb on - strand at 93.432 kb on - strand at 93.827 kb on + strand, within H281DRAFT_03060 at 93.936 kb on - strand at 94.092 kb on - strand at 94.250 kb on + strand, within H281DRAFT_03061 at 94.421 kb on + strand, within H281DRAFT_03061 at 94.797 kb on + strand, within H281DRAFT_03062 at 94.846 kb on - strand, within H281DRAFT_03062 at 94.853 kb on + strand, within H281DRAFT_03062 at 94.853 kb on + strand, within H281DRAFT_03062 at 94.854 kb on - strand, within H281DRAFT_03062 at 94.872 kb on + strand, within H281DRAFT_03062 at 94.897 kb on - strand, within H281DRAFT_03062
Per-strain Table
Position Strand Gene LocusTag Fraction Protocatechuic Acid (C) remove 92,871 - H281DRAFT_03059 0.75 +0.6 92,941 - H281DRAFT_03059 0.77 +0.9 92,942 + H281DRAFT_03059 0.77 -0.1 93,061 - H281DRAFT_03059 0.81 -0.1 93,220 - H281DRAFT_03059 0.86 +0.8 93,220 - H281DRAFT_03059 0.86 +1.6 93,407 - -1.1 93,432 - +1.1 93,432 - +0.7 93,827 + H281DRAFT_03060 0.67 -0.8 93,936 - -1.7 94,092 - -0.5 94,250 + H281DRAFT_03061 0.13 -0.8 94,421 + H281DRAFT_03061 0.62 -0.1 94,797 + H281DRAFT_03062 0.13 -1.1 94,846 - H281DRAFT_03062 0.24 +0.4 94,853 + H281DRAFT_03062 0.25 +1.3 94,853 + H281DRAFT_03062 0.25 +0.4 94,854 - H281DRAFT_03062 0.26 +0.5 94,872 + H281DRAFT_03062 0.30 -0.1 94,897 - H281DRAFT_03062 0.35 -0.7
Or see this region's nucleotide sequence