Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03483

Experiment: PYE 0.5x 4C survival rep1 58 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 4C survival rep1 58 days
3,644,577	+		CCNA_03481	0.66	+1.2
3,644,577	+		CCNA_03481	0.66	+1.1
3,644,577	+		CCNA_03481	0.66	+2.7
3,644,577	+				+1.3
3,644,577	+		CCNA_03481	0.66	+1.6
3,644,585	-		CCNA_03481	0.67	-0.0
3,644,585	-		CCNA_03481	0.67	+0.5
3,644,585	-		CCNA_03481	0.67	-1.3
3,644,585	-		CCNA_03481	0.67	-0.1
3,644,585	-		CCNA_03481	0.67	-0.5
3,644,585	-		CCNA_03481	0.67	-0.8
3,644,604	+		CCNA_03481	0.72	+1.2
3,644,700	+				+0.9
3,644,701	+				+1.3
3,644,701	+				+1.3
3,644,701	+				+1.2
3,644,712	+				+1.1
3,644,712	+				+0.7
3,644,762	+				+0.2
3,644,772	+				-0.5
3,644,799	+				-1.7
3,644,820	-				-0.6
3,644,821	-				+0.3
3,644,821	-				+1.3
3,644,828	-				+0.7
3,644,861	+				-1.8
3,644,895	-		CCNA_03482	0.10	+1.8
3,644,969	+		CCNA_03482	0.20	-2.6
3,644,987	-		CCNA_03482	0.23	-0.2
3,645,015	-		CCNA_03482	0.26	+0.3
3,645,018	+		CCNA_03482	0.27	+0.5
3,645,026	-		CCNA_03482	0.28	+0.9
3,645,040	+		CCNA_03482	0.30	+0.5
3,645,048	-		CCNA_03482	0.31	+0.4
3,645,078	-		CCNA_03482	0.35	+1.3
3,645,121	-				+2.1
3,645,123	+		CCNA_03482	0.40	-1.8
3,645,131	-		CCNA_03482	0.41	+1.0
3,645,131	-		CCNA_03482	0.41	+1.4
3,645,131	-		CCNA_03482	0.41	+1.2
3,645,131	-		CCNA_03482	0.41	+0.3
3,645,131	-		CCNA_03482	0.41	+1.1
3,645,131	-		CCNA_03482	0.41	-0.2
3,645,131	-		CCNA_03482	0.41	-1.0
3,645,131	-		CCNA_03482	0.41	+0.2
3,645,169	+		CCNA_03482	0.46	-0.7
3,645,177	-		CCNA_03482	0.48	+0.7
3,645,199	-		CCNA_03482	0.50	+0.8
3,645,230	-		CCNA_03482	0.54	+0.2
3,645,270	-		CCNA_03482	0.60	+1.6
3,645,270	-		CCNA_03482	0.60	+0.3
3,645,280	-		CCNA_03482	0.61	+0.3
3,645,280	-		CCNA_03482	0.61	-0.0
3,645,281	-		CCNA_03482	0.61	-0.3
3,645,296	+		CCNA_03482	0.63	-1.6
3,645,296	+		CCNA_03482	0.63	-0.3
3,645,296	+		CCNA_03482	0.63	-0.3
3,645,304	-		CCNA_03482	0.64	+0.3
3,645,312	-		CCNA_03482	0.65	+0.9
3,645,431	+		CCNA_03482	0.81	-1.1
3,645,471	+		CCNA_03482	0.86	+1.1
3,645,489	-		CCNA_03482	0.88	+1.3
3,645,502	-				+0.1
3,645,510	+				-0.5
3,645,554	+				-1.7
3,645,571	-				-1.5
3,645,583	+				+0.5
3,645,583	+				-0.5
3,645,591	-				-0.4
3,645,591	-				+1.2
3,645,606	+				-1.6
3,645,618	+				-0.9
3,645,626	-				+0.3
3,645,626	-				+1.0
3,645,636	-				-0.6
3,645,636	-				+1.9
3,645,636	-				+1.1
3,645,636	-				+1.5
3,645,720	+		CCNA_03483	0.16	+3.1
3,645,720	+		CCNA_03483	0.16	-1.5
3,645,723	-		CCNA_03483	0.16	-0.4
3,645,733	-		CCNA_03483	0.17	+0.9
3,645,744	-		CCNA_03483	0.18	+0.3
3,645,747	+		CCNA_03483	0.18	-0.9
3,645,757	+		CCNA_03483	0.19	-2.4
3,645,770	-		CCNA_03483	0.21	-0.3
3,645,770	-		CCNA_03483	0.21	-0.8
3,645,782	-		CCNA_03483	0.22	+1.2
3,645,844	+		CCNA_03483	0.29	+0.7
3,645,844	+		CCNA_03483	0.29	-1.1
3,645,844	+		CCNA_03483	0.29	+0.3
3,645,844	+		CCNA_03483	0.29	-0.5
3,645,852	-		CCNA_03483	0.30	-1.6
3,645,852	-		CCNA_03483	0.30	-0.6
3,645,852	-		CCNA_03483	0.30	-1.8
3,645,852	-		CCNA_03483	0.30	+0.5
3,645,852	-		CCNA_03483	0.30	+1.1
3,645,865	+		CCNA_03483	0.31	-0.4
3,645,874	+		CCNA_03483	0.32	+1.5
3,645,877	-		CCNA_03483	0.32	-0.9
3,645,911	-		CCNA_03483	0.36	-3.3
3,645,922	-		CCNA_03483	0.37	-1.0
3,645,922	-		CCNA_03483	0.37	-0.2
3,645,935	+		CCNA_03483	0.38	+0.2
3,645,985	+		CCNA_03483	0.44	-1.0
3,646,007	+		CCNA_03483	0.46	+0.1
3,646,087	+		CCNA_03483	0.54	-0.5
3,646,087	-		CCNA_03483	0.54	+0.3
3,646,107	-		CCNA_03483	0.57	+0.1
3,646,107	-		CCNA_03483	0.57	+1.1
3,646,130	+		CCNA_03483	0.59	-1.3
3,646,205	+		CCNA_03483	0.67	-1.0
3,646,209	+		CCNA_03483	0.67	-0.7
3,646,217	-		CCNA_03483	0.68	-1.5
3,646,217	-		CCNA_03483	0.68	+0.3
3,646,217	-		CCNA_03483	0.68	-0.3
3,646,227	-		CCNA_03483	0.69	-0.7
3,646,269	-		CCNA_03483	0.74	-0.1
3,646,295	+		CCNA_03483	0.76	-2.3
3,646,321	-		CCNA_03483	0.79	-0.7
3,646,342	+		CCNA_03483	0.81	+0.1
3,646,349	-		CCNA_03483	0.82	-0.6
3,646,359	-		CCNA_03483	0.83	-0.2
3,646,373	-		CCNA_03483	0.85	+0.6
3,646,373	-		CCNA_03483	0.85	-0.8
3,646,409	-		CCNA_03483	0.88	-1.5
3,646,420	-		CCNA_03483	0.90	-2.6
3,646,470	-				+1.2
3,646,476	-				+3.7
3,646,507	+				-3.2
3,646,512	+				+0.8
3,646,515	-				-0.2
3,646,532	+				-0.0
3,646,542	+				-1.1
3,646,547	+				-1.6
3,646,550	-				+0.9
3,646,550	-				+1.2
3,646,557	+				-2.2
3,646,557	+				+0.2
3,646,557	+				+0.4
3,646,557	+				+0.7
3,646,557	+				+1.0
3,646,565	-				-1.1
3,646,565	-				-0.3
3,646,565	-				-0.5
3,646,624	+				-0.7
3,646,624	+				-0.8
3,646,624	+				-0.1
3,646,632	-				-0.2
3,646,641	+				+0.9
3,646,716	-		CCNA_03484	0.20	-2.6
3,646,726	-		CCNA_03484	0.23	-1.3
3,646,755	-		CCNA_03484	0.29	+0.5
3,646,813	+		CCNA_03484	0.41	+0.2
3,646,813	+		CCNA_03484	0.41	+1.2
3,646,821	-		CCNA_03484	0.43	+0.1
3,646,821	-		CCNA_03484	0.43	-0.0
3,646,821	-		CCNA_03484	0.43	-0.1
3,646,821	-		CCNA_03484	0.43	+0.4
3,646,821	-		CCNA_03484	0.43	-1.1
3,646,821	-		CCNA_03484	0.43	+0.1
3,646,821	-		CCNA_03484	0.43	-0.3
3,646,842	-		CCNA_03484	0.48	+0.8
3,646,870	+		CCNA_03484	0.54	-0.5
3,646,897	-		CCNA_03484	0.59	-0.3
3,646,899	+		CCNA_03484	0.60	-0.2
3,646,899	+		CCNA_03484	0.60	-0.3
3,646,899	+		CCNA_03484	0.60	-0.5
3,646,907	-		CCNA_03484	0.62	-1.7
3,646,907	-		CCNA_03484	0.62	+0.4
3,647,042	-				+0.0
3,647,042	-				-0.4
3,647,049	+				-1.7
3,647,057	-				+0.0
3,647,084	+				-0.4
3,647,149	-				+0.6
3,647,212	-		CCNA_03485	0.13	+0.5
3,647,228	+		CCNA_03485	0.14	+0.5
3,647,232	+		CCNA_03485	0.15	-1.0
3,647,238	+		CCNA_03485	0.15	-1.1
3,647,238	+		CCNA_03485	0.15	-0.5
3,647,248	-		CCNA_03485	0.17	+0.2
3,647,248	-		CCNA_03485	0.17	+0.6
3,647,253	+		CCNA_03485	0.17	-1.2
3,647,273	+		CCNA_03485	0.19	-1.7
3,647,273	+		CCNA_03485	0.19	-0.7
3,647,280	+		CCNA_03485	0.20	-2.4
3,647,281	-		CCNA_03485	0.20	+0.7
3,647,288	-		CCNA_03485	0.21	-0.6
3,647,293	-		CCNA_03485	0.21	-0.9
3,647,293	-		CCNA_03485	0.21	+0.9
3,647,293	-		CCNA_03485	0.21	+0.5
3,647,293	-		CCNA_03485	0.21	+0.8
3,647,298	+		CCNA_03485	0.22	-1.7
3,647,395	-		CCNA_03485	0.32	-0.7
3,647,397	-		CCNA_03485	0.32	-2.0
3,647,397	-		CCNA_03485	0.32	+1.6
3,647,397	-		CCNA_03485	0.32	+1.4
3,647,421	+		CCNA_03485	0.34	-0.4
3,647,447	+		CCNA_03485	0.37	-1.3
3,647,455	-		CCNA_03485	0.38	+1.1
3,647,469	+		CCNA_03485	0.39	-1.4
3,647,469	+		CCNA_03485	0.39	-0.4
3,647,496	+		CCNA_03485	0.42	-1.1