Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02977

Experiment: PYE 0.5x 4C survival rep1 58 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 4C survival rep1 58 days
3,131,103	+		CCNA_02975	0.88	+0.5
3,131,162	+				-0.3
3,131,162	+				-0.1
3,131,172	+				+1.5
3,131,172	+				+0.8
3,131,193	-				+1.3
3,131,214	-				-0.5
3,131,232	+				+0.9
3,131,233	+				+0.7
3,131,233	+				+1.2
3,131,234	-				+0.9
3,131,239	+				+0.3
3,131,244	+				+1.2
3,131,247	-				+1.1
3,131,247	-				+1.8
3,131,257	-				+0.8
3,131,262	+				+1.2
3,131,284	-				+1.5
3,131,286	+				+1.8
3,131,286	+				+0.5
3,131,294	-				+0.8
3,131,294	-				+0.4
3,131,294	-				+3.0
3,131,322	+				+1.0
3,131,322	+				+1.2
3,131,324	+				+1.1
3,131,329	+				+0.1
3,131,329	+				+0.3
3,131,330	-				+1.6
3,131,332	-				+1.8
3,131,332	-				+1.8
3,131,335	+				+0.7
3,131,342	-				+0.1
3,131,343	-				+1.0
3,131,345	+				+0.6
3,131,362	+				-0.4
3,131,362	+				+1.6
3,131,371	+				+0.1
3,131,374	-				+0.4
3,131,379	-				+1.4
3,131,391	+				+0.3
3,131,399	-				-0.1
3,131,442	-				+2.1
3,131,468	+				-2.4
3,131,522	+		CCNA_02976	0.12	-0.8
3,131,542	-		CCNA_02976	0.17	+0.5
3,131,545	+		CCNA_02976	0.18	-1.3
3,131,545	+		CCNA_02976	0.18	-2.0
3,131,553	-		CCNA_02976	0.21	-0.8
3,131,553	-		CCNA_02976	0.21	+1.6
3,131,553	-		CCNA_02976	0.21	+2.4
3,131,553	-		CCNA_02976	0.21	+0.9
3,131,558	+		CCNA_02976	0.22	-0.5
3,131,558	+		CCNA_02976	0.22	-1.1
3,131,558	+		CCNA_02976	0.22	-2.6
3,131,560	-		CCNA_02976	0.23	+2.2
3,131,566	-		CCNA_02976	0.24	+0.7
3,131,586	-		CCNA_02976	0.30	+1.2
3,131,648	+		CCNA_02976	0.47	-1.1
3,131,656	-		CCNA_02976	0.49	+1.5
3,131,656	-		CCNA_02976	0.49	+1.1
3,131,659	+				-0.9
3,131,667	-		CCNA_02976	0.52	+1.3
3,131,681	+		CCNA_02976	0.56	-0.9
3,131,728	-		CCNA_02976	0.69	+0.7
3,131,747	-		CCNA_02976	0.74	+1.1
3,131,769	-		CCNA_02976	0.81	+1.1
3,131,800	+		CCNA_02976	0.89	-0.3
3,131,805	+				+0.2
3,131,809	+				-2.5
3,131,809	+				+1.4
3,131,813	-				+0.9
3,131,813	-				+0.6
3,131,815	-				+1.8
3,131,817	-				+1.3
3,131,817	-				-0.7
3,131,817	-				+0.6
3,131,817	-				+1.1
3,131,853	+				-2.3
3,132,008	+				-1.5
3,132,009	+				-2.5
3,132,074	-				-1.9
3,132,075	+				-3.4
3,132,083	-				-1.8
3,132,091	+				-4.5
3,132,126	-		CCNA_02977	0.11	-2.0
3,132,127	-		CCNA_02977	0.11	-1.8
3,132,189	+		CCNA_02977	0.22	-3.1
3,132,189	+		CCNA_02977	0.22	-1.8
3,132,189	+		CCNA_02977	0.22	-3.0
3,132,194	+		CCNA_02977	0.23	-0.9
3,132,194	+		CCNA_02977	0.23	-4.5
3,132,194	+		CCNA_02977	0.23	-4.0
3,132,194	+		CCNA_02977	0.23	-0.9
3,132,197	-		CCNA_02977	0.24	-4.1
3,132,202	-		CCNA_02977	0.24	+0.5
3,132,202	-		CCNA_02977	0.24	-1.4
3,132,248	-		CCNA_02977	0.32	-5.4
3,132,250	+		CCNA_02977	0.33	-3.4
3,132,258	-		CCNA_02977	0.34	-4.5
3,132,269	+		CCNA_02977	0.36	-3.1
3,132,269	+		CCNA_02977	0.36	-0.8
3,132,309	-		CCNA_02977	0.43	-3.0
3,132,311	+		CCNA_02977	0.44	-5.0
3,132,312	+		CCNA_02977	0.44	-0.9
3,132,320	-		CCNA_02977	0.45	+0.1
3,132,336	+		CCNA_02977	0.48	-3.2
3,132,347	+		CCNA_02977	0.50	-4.9
3,132,355	-		CCNA_02977	0.51	+0.5
3,132,383	+		CCNA_02977	0.56	-0.9
3,132,394	+		CCNA_02977	0.58	-6.2
3,132,397	-		CCNA_02977	0.59	-1.5
3,132,434	+		CCNA_02977	0.65	-4.2
3,132,498	+		CCNA_02977	0.76	-4.6
3,132,498	+		CCNA_02977	0.76	-2.9
3,132,498	+		CCNA_02977	0.76	-3.6
3,132,506	-		CCNA_02977	0.78	-3.2
3,132,506	-		CCNA_02977	0.78	-0.9
3,132,506	-		CCNA_02977	0.78	-1.4
3,132,506	-		CCNA_02977	0.78	-3.8
3,132,506	-		CCNA_02977	0.78	-3.1
3,132,542	+		CCNA_02977	0.84	-3.4
3,132,587	+				-0.4
3,132,587	+				-0.5
3,132,593	+				-0.0
3,132,642	+				+0.4
3,132,650	-				-1.1
3,132,665	-				+1.1
3,132,665	-				-0.9
3,132,665	-				-0.3
3,132,674	-				-0.9
3,132,678	+				+0.5
3,132,700	-				+0.5
3,132,712	+				-2.3
3,132,712	+				-1.2
3,132,712	+				-1.3
3,132,740	+				-1.8
3,132,741	+				-2.6
3,132,750	-				-0.5
3,132,751	+				-0.7
3,132,778	-				-2.3
3,132,846	-				-1.5
3,132,848	+				+0.5
3,132,875	+				-0.3
3,132,877	-				-0.2
3,132,884	+				-0.5
3,132,888	+				+1.3
3,132,888	+				+0.4
3,132,908	-				+2.1
3,132,962	-				-1.5
3,132,984	-				-0.3
3,132,987	+				-1.5
3,133,005	+				+1.2
3,133,015	+				-1.4
3,133,020	+				-0.3
3,133,023	-				-0.6
3,133,025	+				-2.2
3,133,028	-		CCNA_02978	0.10	-1.6
3,133,028	-		CCNA_02978	0.10	-1.1
3,133,028	-		CCNA_02978	0.10	-1.2
3,133,039	+		CCNA_02978	0.11	-0.8
3,133,047	+		CCNA_02978	0.11	-0.6
3,133,054	+		CCNA_02978	0.12	-1.3
3,133,054	+		CCNA_02978	0.12	-0.5
3,133,062	-		CCNA_02978	0.12	-2.5
3,133,062	-		CCNA_02978	0.12	-1.1
3,133,112	+		CCNA_02978	0.16	-0.9
3,133,117	+		CCNA_02978	0.16	-0.6
3,133,117	+		CCNA_02978	0.16	+0.7
3,133,120	-		CCNA_02978	0.16	+0.3
3,133,125	-		CCNA_02978	0.17	-0.6
3,133,125	-		CCNA_02978	0.17	+2.4
3,133,125	-		CCNA_02978	0.17	-1.3
3,133,125	-		CCNA_02978	0.17	+2.6
3,133,135	+		CCNA_02978	0.17	-0.8
3,133,135	-		CCNA_02978	0.17	+0.5
3,133,135	-		CCNA_02978	0.17	-2.1
3,133,232	+		CCNA_02978	0.24	+2.6
3,133,255	-		CCNA_02978	0.25	+0.5
3,133,257	+		CCNA_02978	0.26	-2.6
3,133,265	-		CCNA_02978	0.26	-0.9
3,133,276	-		CCNA_02978	0.27	+0.5
3,133,305	+		CCNA_02978	0.29	-0.1
3,133,319	-		CCNA_02978	0.30	-1.6
3,133,319	-		CCNA_02978	0.30	-1.6
3,133,319	-		CCNA_02978	0.30	+2.1
3,133,334	-		CCNA_02978	0.31	-0.5
3,133,397	-		CCNA_02978	0.35	-1.3
3,133,397	-		CCNA_02978	0.35	-1.6
3,133,424	+		CCNA_02978	0.37	-0.1
3,133,432	+		CCNA_02978	0.37	+0.1
3,133,437	+		CCNA_02978	0.38	-0.8
3,133,439	-		CCNA_02978	0.38	-1.9
3,133,440	-		CCNA_02978	0.38	+0.1
3,133,442	+		CCNA_02978	0.38	-0.7
3,133,444	+		CCNA_02978	0.38	+0.9
3,133,450	-		CCNA_02978	0.39	-2.3
3,133,451	-		CCNA_02978	0.39	-0.8
3,133,455	+		CCNA_02978	0.39	-1.5
3,133,455	+		CCNA_02978	0.39	+0.0
3,133,495	+		CCNA_02978	0.42	-0.9
3,133,503	-		CCNA_02978	0.42	-1.4
3,133,513	+		CCNA_02978	0.43	-0.2
3,133,518	+		CCNA_02978	0.43	+0.4
3,133,521	-		CCNA_02978	0.43	+2.1
3,133,541	-		CCNA_02978	0.45	-1.9