Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02791

Experiment: PYE 0.5x 4C survival rep1 58 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 4C survival rep1 58 days
2,945,725	-				+1.2
2,945,795	+				-1.0
2,945,803	-				+0.4
2,945,807	+				-1.5
2,945,807	+				+0.3
2,945,815	-				+0.4
2,945,815	-				+0.1
2,945,815	-				+1.4
2,945,815	-				+1.2
2,945,815	-				+1.6
2,945,815	-				+0.6
2,945,885	-		CCNA_02789	0.34	+1.3
2,945,918	+		CCNA_02789	0.50	-0.8
2,945,918	+		CCNA_02789	0.50	-0.2
2,945,937	+		CCNA_02789	0.59	+1.3
2,945,950	+		CCNA_02789	0.65	-1.6
2,946,026	+				+2.3
2,946,034	-				+1.3
2,946,051	+				-1.2
2,946,052	-				+1.8
2,946,052	-				-2.2
2,946,101	+				-2.7
2,946,114	-				-0.8
2,946,126	-				+0.6
2,946,144	-				-0.5
2,946,147	+				+0.8
2,946,207	-				-2.6
2,946,222	-		CCNA_02790	0.13	+1.3
2,946,291	-		CCNA_02790	0.26	+0.6
2,946,311	+		CCNA_02790	0.30	+0.9
2,946,311	+		CCNA_02790	0.30	-1.0
2,946,311	+		CCNA_02790	0.30	-0.8
2,946,324	+		CCNA_02790	0.32	+1.3
2,946,331	+		CCNA_02790	0.33	+2.3
2,946,332	+		CCNA_02790	0.34	+3.3
2,946,339	+		CCNA_02790	0.35	-0.3
2,946,357	-		CCNA_02790	0.38	+1.3
2,946,366	+		CCNA_02790	0.40	+0.0
2,946,374	-		CCNA_02790	0.41	-0.5
2,946,374	-		CCNA_02790	0.41	+2.3
2,946,381	-		CCNA_02790	0.43	+0.9
2,946,392	+		CCNA_02790	0.45	-2.3
2,946,392	+		CCNA_02790	0.45	+1.2
2,946,392	+		CCNA_02790	0.45	+0.5
2,946,392	+		CCNA_02790	0.45	+3.3
2,946,392	+		CCNA_02790	0.45	+0.7
2,946,392	+		CCNA_02790	0.45	-0.3
2,946,392	+		CCNA_02790	0.45	+0.7
2,946,393	+		CCNA_02790	0.45	+0.9
2,946,400	-		CCNA_02790	0.46	-2.6
2,946,400	-		CCNA_02790	0.46	-0.5
2,946,400	-		CCNA_02790	0.46	-0.8
2,946,400	-		CCNA_02790	0.46	+0.2
2,946,400	-		CCNA_02790	0.46	-1.1
2,946,400	-		CCNA_02790	0.46	-1.3
2,946,400	-		CCNA_02790	0.46	-1.7
2,946,407	-		CCNA_02790	0.48	-2.6
2,946,488	+		CCNA_02790	0.63	-1.1
2,946,517	+		CCNA_02790	0.69	+0.6
2,946,551	+		CCNA_02790	0.75	-3.1
2,946,551	+		CCNA_02790	0.75	-0.3
2,946,570	-		CCNA_02790	0.79	-0.4
2,946,575	+		CCNA_02790	0.80	-1.7
2,946,575	+		CCNA_02790	0.80	-0.9
2,946,594	+		CCNA_02790	0.83	+0.1
2,946,626	+		CCNA_02790	0.89	+0.7
2,946,641	+				-1.3
2,946,649	-				-1.8
2,946,671	+				+0.1
2,946,671	+				-1.1
2,946,679	-				-3.4
2,946,680	-				-2.6
2,946,699	-				+0.3
2,946,709	+				-0.3
2,946,709	+				+0.8
2,946,709	+				+0.7
2,946,717	-				+0.5
2,946,717	-				+0.0
2,946,717	-				+0.7
2,946,738	-				+0.2
2,946,740	+				-0.7
2,946,746	-				-0.0
2,946,748	-				+2.3
2,946,754	-				-1.8
2,946,768	-				-0.5
2,946,805	-		CCNA_02791	0.10	+2.3
2,946,878	+		CCNA_02791	0.17	-0.5
2,946,886	-		CCNA_02791	0.18	+2.3
2,946,911	+		CCNA_02791	0.20	-0.6
2,946,931	+		CCNA_02791	0.22	-0.8
2,946,936	+		CCNA_02791	0.22	-0.7
2,946,936	+		CCNA_02791	0.22	-1.4
2,946,938	+		CCNA_02791	0.23	-1.4
2,946,955	-		CCNA_02791	0.24	+2.3
2,946,978	+		CCNA_02791	0.26	+1.0
2,946,978	+		CCNA_02791	0.26	-1.1
2,946,986	-		CCNA_02791	0.27	-1.1
2,946,999	+		CCNA_02791	0.28	-0.4
2,946,999	+		CCNA_02791	0.28	+0.7
2,946,999	+		CCNA_02791	0.28	+0.2
2,946,999	+		CCNA_02791	0.28	-0.4
2,946,999	+		CCNA_02791	0.28	+0.9
2,946,999	+		CCNA_02791	0.28	-1.1
2,947,004	+		CCNA_02791	0.29	+2.3
2,947,007	-		CCNA_02791	0.29	-1.6
2,947,007	-		CCNA_02791	0.29	+2.3
2,947,007	-		CCNA_02791	0.29	-1.1
2,947,007	-		CCNA_02791	0.29	-1.1
2,947,007	-		CCNA_02791	0.29	-1.2
2,947,007	-		CCNA_02791	0.29	+1.3
2,947,007	-		CCNA_02791	0.29	-1.4
2,947,018	+		CCNA_02791	0.30	-0.2
2,947,026	-		CCNA_02791	0.31	+2.3
2,947,026	-		CCNA_02791	0.31	-1.4
2,947,026	-		CCNA_02791	0.31	+1.3
2,947,026	-		CCNA_02791	0.31	-1.3
2,947,026	-		CCNA_02791	0.31	-1.0
2,947,043	+		CCNA_02791	0.32	-0.4
2,947,043	+		CCNA_02791	0.32	+1.0
2,947,046	-		CCNA_02791	0.33	-1.8
2,947,046	-		CCNA_02791	0.33	-0.5
2,947,051	-		CCNA_02791	0.33	-0.8
2,947,051	-		CCNA_02791	0.33	+0.1
2,947,051	-		CCNA_02791	0.33	+0.0
2,947,063	+		CCNA_02791	0.34	+0.2
2,947,073	+		CCNA_02791	0.35	-1.1
2,947,076	-		CCNA_02791	0.35	-2.6
2,947,091	+		CCNA_02791	0.37	-1.6
2,947,099	+		CCNA_02791	0.38	-0.4
2,947,139	-		CCNA_02791	0.41	-0.3
2,947,139	-		CCNA_02791	0.41	-2.9
2,947,190	+		CCNA_02791	0.46	+0.0
2,947,203	-		CCNA_02791	0.47	-0.3
2,947,203	-		CCNA_02791	0.47	-1.5
2,947,203	-		CCNA_02791	0.47	-1.2
2,947,203	-		CCNA_02791	0.47	-1.8
2,947,210	-		CCNA_02791	0.48	-2.6
2,947,211	+		CCNA_02791	0.48	+0.9
2,947,220	-		CCNA_02791	0.49	-0.4
2,947,229	+		CCNA_02791	0.50	-0.1
2,947,293	+		CCNA_02791	0.56	-0.9
2,947,303	+		CCNA_02791	0.57	+0.3
2,947,325	-		CCNA_02791	0.59	+0.0
2,947,325	-		CCNA_02791	0.59	-2.1
2,947,326	-		CCNA_02791	0.59	+0.0
2,947,327	+		CCNA_02791	0.59	+1.0
2,947,375	-		CCNA_02791	0.63	+2.3
2,947,379	-		CCNA_02791	0.64	+1.5
2,947,379	-		CCNA_02791	0.64	-1.4
2,947,381	+		CCNA_02791	0.64	+0.1
2,947,386	+		CCNA_02791	0.64	+0.6
2,947,442	+		CCNA_02791	0.70	+0.1
2,947,449	+		CCNA_02791	0.70	-1.1
2,947,471	+		CCNA_02791	0.72	+0.1
2,947,491	+		CCNA_02791	0.74	-0.6
2,947,538	+		CCNA_02791	0.78	-1.1
2,947,552	-		CCNA_02791	0.80	+2.7
2,947,559	+		CCNA_02791	0.80	-0.6
2,947,564	+		CCNA_02791	0.81	+1.1
2,947,572	-		CCNA_02791	0.82	-0.3
2,947,572	-		CCNA_02791	0.82	+0.3
2,947,589	+		CCNA_02791	0.83	+0.4
2,947,655	-		CCNA_02791	0.89	+0.9
2,947,678	-				+2.3
2,947,678	-				-2.0
2,947,697	-				-0.6
2,947,708	+				-1.1
2,947,723	-				-0.4
2,947,787	+				+1.3
2,947,796	+				-0.4
2,947,808	+				-0.8
2,947,816	+				-0.3
2,947,825	-				-2.0
2,947,872	+				-0.6
2,947,872	+				-0.3
2,947,872	+				-0.7
2,947,874	+				+0.7
2,947,874	+				+0.1
2,947,874	+				-0.6
2,947,882	-				+1.0
2,947,882	-				-0.4
2,947,882	-				-1.9
2,947,889	-				+0.0
2,947,894	-				-0.5
2,947,898	+				-2.7
2,947,906	-				-0.8
2,947,955	+				-0.7
2,947,957	-				-2.1
2,947,963	-				-2.2
2,947,985	-				+2.3
2,947,987	-				+0.7
2,948,028	-				-0.7
2,948,108	-				+1.3
2,948,114	-				-1.1
2,948,121	-				+0.7
2,948,159	+				-2.5
2,948,185	-				+0.2
2,948,196	-				+0.3
2,948,211	+		CCNA_02792	0.10	+1.3
2,948,216	+		CCNA_02792	0.11	+0.3
2,948,216	+		CCNA_02792	0.11	-0.5
2,948,216	+		CCNA_02792	0.11	-2.3
2,948,224	-		CCNA_02792	0.11	-1.0
2,948,251	+		CCNA_02792	0.12	-0.6
2,948,257	+		CCNA_02792	0.12	-1.4
2,948,326	+		CCNA_02792	0.14	+1.3
2,948,344	-		CCNA_02792	0.15	-0.7
2,948,354	-		CCNA_02792	0.15	-2.3
2,948,354	-		CCNA_02792	0.15	+0.3
2,948,354	-		CCNA_02792	0.15	+1.0
2,948,365	+		CCNA_02792	0.15	-1.0
2,948,365	-		CCNA_02792	0.15	+0.0
2,948,403	+		CCNA_02792	0.17	-0.7
2,948,413	+		CCNA_02792	0.17	+0.8
2,948,421	-		CCNA_02792	0.17	-0.5
2,948,450	+		CCNA_02792	0.18	-0.4
2,948,450	+		CCNA_02792	0.18	-0.0
2,948,458	-		CCNA_02792	0.18	-1.2
2,948,460	+		CCNA_02792	0.18	+0.9
2,948,468	-		CCNA_02792	0.19	+0.7
2,948,478	-		CCNA_02792	0.19	-0.5
2,948,478	-		CCNA_02792	0.19	+1.1
2,948,478	-		CCNA_02792	0.19	-1.5
2,948,494	+		CCNA_02792	0.20	+1.3
2,948,494	+		CCNA_02792	0.20	+0.9
2,948,502	-		CCNA_02792	0.20	-0.5
2,948,508	-		CCNA_02792	0.20	-0.5
2,948,508	-		CCNA_02792	0.20	-0.3
2,948,538	+		CCNA_02792	0.21	+0.3
2,948,552	+		CCNA_02792	0.21	-2.6
2,948,560	-		CCNA_02792	0.22	-1.1
2,948,591	-		CCNA_02792	0.23	+0.2
2,948,614	-		CCNA_02792	0.23	-2.1
2,948,617	+		CCNA_02792	0.24	-0.2
2,948,624	+		CCNA_02792	0.24	-1.4
2,948,665	-		CCNA_02792	0.25	-0.0
2,948,670	-		CCNA_02792	0.25	-1.3
2,948,685	+		CCNA_02792	0.26	-0.7
2,948,749	-		CCNA_02792	0.28	-2.8
2,948,756	+		CCNA_02792	0.28	+1.7
2,948,756	+		CCNA_02792	0.28	+0.7