Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02202

Experiment: PYE 0.5x 4C survival rep1 58 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 4C survival rep1 58 days
2,349,468	-		CCNA_02200	0.35	+0.1
2,349,504	+		CCNA_02200	0.44	+0.5
2,349,538	+		CCNA_02200	0.53	-1.0
2,349,538	+		CCNA_02200	0.53	+0.5
2,349,539	+		CCNA_02200	0.53	-0.5
2,349,547	-		CCNA_02200	0.55	+0.0
2,349,547	-		CCNA_02200	0.55	-1.0
2,349,558	+		CCNA_02200	0.58	-1.6
2,349,561	-		CCNA_02200	0.59	-0.9
2,349,574	-		CCNA_02200	0.62	+0.5
2,349,588	-		CCNA_02200	0.66	-1.0
2,349,601	+		CCNA_02200	0.69	-1.0
2,349,603	-		CCNA_02200	0.69	-0.4
2,349,635	+		CCNA_02200	0.78	+0.2
2,349,657	+		CCNA_02200	0.83	-1.4
2,349,716	+				-1.7
2,349,724	-				-0.5
2,349,767	-				+0.2
2,349,777	-				-0.8
2,349,820	+				-0.2
2,349,900	+		CCNA_02201	0.20	-1.2
2,349,900	+				+0.2
2,349,900	+		CCNA_02201	0.20	+0.3
2,349,900	-		CCNA_02201	0.20	-1.2
2,349,908	-		CCNA_02201	0.22	+0.0
2,349,908	-		CCNA_02201	0.22	+0.7
2,349,942	-		CCNA_02201	0.28	-0.2
2,349,972	+		CCNA_02201	0.33	+1.1
2,349,972	+		CCNA_02201	0.33	-0.9
2,349,980	-		CCNA_02201	0.35	+2.5
2,349,987	-		CCNA_02201	0.36	-0.5
2,349,992	-		CCNA_02201	0.37	+0.2
2,350,015	+		CCNA_02201	0.41	-1.7
2,350,027	+		CCNA_02201	0.43	+2.5
2,350,035	-		CCNA_02201	0.45	-1.9
2,350,035	-		CCNA_02201	0.45	+0.9
2,350,037	+		CCNA_02201	0.45	+1.3
2,350,055	-		CCNA_02201	0.48	-2.2
2,350,062	+		CCNA_02201	0.49	-2.5
2,350,074	+		CCNA_02201	0.52	-1.1
2,350,074	+		CCNA_02201	0.52	-1.3
2,350,074	+		CCNA_02201	0.52	-0.6
2,350,076	+		CCNA_02201	0.52	-0.5
2,350,082	-		CCNA_02201	0.53	+1.2
2,350,082	-				-0.6
2,350,178	-		CCNA_02201	0.70	+1.0
2,350,209	+		CCNA_02201	0.76	+1.6
2,350,237	-		CCNA_02201	0.81	-0.2
2,350,252	-		CCNA_02201	0.83	+1.3
2,350,346	-				-1.2
2,350,346	-				+2.1
2,350,349	+				-2.7
2,350,357	-				-1.6
2,350,357	-				+0.1
2,350,375	+				-1.0
2,350,375	+				-0.2
2,350,376	-				-0.1
2,350,376	-				+0.2
2,350,383	-				-0.1
2,350,450	+				+0.7
2,350,458	-				+0.6
2,350,459	-				+0.7
2,350,505	+		CCNA_02202	0.11	-1.6
2,350,554	+		CCNA_02202	0.18	-1.9
2,350,580	+		CCNA_02202	0.21	-0.9
2,350,615	+		CCNA_02202	0.25	+0.0
2,350,616	+		CCNA_02202	0.25	+0.7
2,350,639	-		CCNA_02202	0.28	+0.5
2,350,642	+		CCNA_02202	0.29	-0.2
2,350,643	-		CCNA_02202	0.29	-2.1
2,350,655	-		CCNA_02202	0.30	-1.1
2,350,655	-		CCNA_02202	0.30	-0.8
2,350,702	+		CCNA_02202	0.36	-0.5
2,350,704	+		CCNA_02202	0.36	-0.3
2,350,704	+		CCNA_02202	0.36	+0.0
2,350,727	-		CCNA_02202	0.39	-0.2
2,350,735	+		CCNA_02202	0.40	-0.8
2,350,744	-		CCNA_02202	0.41	-1.6
2,350,744	-		CCNA_02202	0.41	+0.2
2,350,787	-		CCNA_02202	0.47	+0.2
2,350,817	+		CCNA_02202	0.51	-0.1
2,350,825	-		CCNA_02202	0.52	+2.8
2,350,827	+		CCNA_02202	0.52	-0.4
2,350,836	-		CCNA_02202	0.53	-1.6
2,350,839	+		CCNA_02202	0.53	-1.5
2,350,839	+		CCNA_02202	0.53	-2.5
2,350,882	+		CCNA_02202	0.59	-0.3
2,350,882	+		CCNA_02202	0.59	-0.5
2,350,890	-		CCNA_02202	0.60	-2.6
2,350,907	+		CCNA_02202	0.62	+0.3
2,350,942	+		CCNA_02202	0.66	-2.1
2,350,951	-		CCNA_02202	0.67	-1.2
2,350,953	+		CCNA_02202	0.68	-1.2
2,350,968	+		CCNA_02202	0.69	-1.3
2,350,981	-		CCNA_02202	0.71	-0.2
2,350,989	-		CCNA_02202	0.72	+1.0
2,351,002	+		CCNA_02202	0.74	+0.6
2,351,017	+		CCNA_02202	0.76	-0.4
2,351,018	+		CCNA_02202	0.76	-0.6
2,351,022	+		CCNA_02202	0.76	-1.3
2,351,022	+		CCNA_02202	0.76	-1.9
2,351,022	+		CCNA_02202	0.76	-0.8
2,351,025	-		CCNA_02202	0.77	-0.4
2,351,025	-		CCNA_02202	0.77	-2.1
2,351,025	-		CCNA_02202	0.77	+0.5
2,351,030	-		CCNA_02202	0.77	-0.1
2,351,030	-		CCNA_02202	0.77	-1.4
2,351,030	-		CCNA_02202	0.77	-1.8
2,351,030	-		CCNA_02202	0.77	+1.2
2,351,030	-		CCNA_02202	0.77	-0.7
2,351,030	-		CCNA_02202	0.77	-1.1
2,351,077	+		CCNA_02202	0.83	-1.3
2,351,084	+		CCNA_02202	0.84	-0.4
2,351,117	+		CCNA_02202	0.88	-1.2
2,351,117	+		CCNA_02202	0.88	-0.5
2,351,117	+		CCNA_02202	0.88	-0.7
2,351,117	+		CCNA_02202	0.88	-0.2
2,351,117	+		CCNA_02202	0.88	+1.3
2,351,117	+		CCNA_02202	0.88	+0.2
2,351,125	-		CCNA_02202	0.89	-0.6
2,351,125	-		CCNA_02202	0.89	+0.6
2,351,125	-		CCNA_02202	0.89	-0.0
2,351,125	-		CCNA_02202	0.89	+0.5
2,351,125	-		CCNA_02202	0.89	-0.1
2,351,125	-		CCNA_02202	0.89	+0.6
2,351,140	-				+0.2
2,351,151	+				-2.3
2,351,151	+				-0.8
2,351,152	-				+0.4
2,351,200	+				-2.1
2,351,205	+				-1.3
2,351,239	+				+0.6
2,351,252	+				+1.8
2,351,289	-		CCNA_02203	0.13	+2.2
2,351,294	-		CCNA_02203	0.14	+0.6
2,351,302	-		CCNA_02203	0.15	+1.3
2,351,302	-		CCNA_02203	0.15	-1.6
2,351,304	+		CCNA_02203	0.16	-1.9
2,351,342	+		CCNA_02203	0.22	-0.6
2,351,359	+		CCNA_02203	0.25	+3.2
2,351,377	-		CCNA_02203	0.28	-0.7
2,351,401	-		CCNA_02203	0.32	-1.3
2,351,415	-		CCNA_02203	0.35	+0.8
2,351,419	+		CCNA_02203	0.35	-1.1
2,351,427	-		CCNA_02203	0.37	-1.6
2,351,444	-		CCNA_02203	0.40	-2.1
2,351,445	-		CCNA_02203	0.40	-0.7
2,351,512	+		CCNA_02203	0.51	-3.4
2,351,512	+		CCNA_02203	0.51	+2.2
2,351,512	+		CCNA_02203	0.51	-1.5
2,351,512	+		CCNA_02203	0.51	-0.7
2,351,512	+		CCNA_02203	0.51	+2.5
2,351,520	-		CCNA_02203	0.53	-0.8
2,351,520	-		CCNA_02203	0.53	+0.5
2,351,520	-		CCNA_02203	0.53	+0.5
2,351,520	-		CCNA_02203	0.53	-1.3
2,351,520	-		CCNA_02203	0.53	-1.2
2,351,520	-		CCNA_02203	0.53	+0.4
2,351,555	-		CCNA_02203	0.59	-0.1
2,351,616	-		CCNA_02203	0.69	-1.1
2,351,653	-		CCNA_02203	0.76	+1.6
2,351,703	-		CCNA_02203	0.84	-0.6
2,351,713	-		CCNA_02203	0.86	-0.2
2,351,733	-		CCNA_02203	0.90	-1.8
2,351,761	-				-2.5
2,351,801	+				+0.2
2,351,846	+				-0.6
2,351,846	+				-0.3
2,351,854	-				+1.0
2,351,854	-				+0.5
2,351,854	-				+0.8
2,351,854	-				+0.8
2,351,854	-				+0.6
2,351,912	+				+0.3
2,351,916	-				+0.9