Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01568

Experiment: PYE 0.5x 4C survival rep1 58 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 4C survival rep1 58 days
1,683,924	+		CCNA_01567	0.33	-0.4
1,683,924	+		CCNA_01567	0.33	-1.0
1,683,986	+		CCNA_01567	0.39	-2.0
1,683,989	-		CCNA_01567	0.39	-1.0
1,683,989	-		CCNA_01567	0.39	-0.2
1,684,074	+		CCNA_01567	0.47	-1.8
1,684,074	+		CCNA_01567	0.47	-0.9
1,684,100	+		CCNA_01567	0.49	-0.0
1,684,106	+		CCNA_01567	0.50	+1.5
1,684,106	+		CCNA_01567	0.50	-2.1
1,684,109	-		CCNA_01567	0.50	+0.5
1,684,114	-		CCNA_01567	0.50	-0.8
1,684,210	+		CCNA_01567	0.59	-0.9
1,684,218	-		CCNA_01567	0.60	-0.0
1,684,233	+		CCNA_01567	0.61	+0.1
1,684,241	-				-1.5
1,684,241	-		CCNA_01567	0.62	+2.5
1,684,241	-		CCNA_01567	0.62	+0.2
1,684,265	+		CCNA_01567	0.64	+0.2
1,684,265	+		CCNA_01567	0.64	-1.7
1,684,265	+		CCNA_01567	0.64	-2.3
1,684,265	+		CCNA_01567	0.64	-0.3
1,684,265	+		CCNA_01567	0.64	-3.5
1,684,273	-		CCNA_01567	0.65	-0.0
1,684,273	-		CCNA_01567	0.65	-1.4
1,684,273	-		CCNA_01567	0.65	+0.2
1,684,273	-		CCNA_01567	0.65	-0.2
1,684,275	+		CCNA_01567	0.65	+0.2
1,684,275	+		CCNA_01567	0.65	-0.2
1,684,275	+		CCNA_01567	0.65	+0.5
1,684,275	+		CCNA_01567	0.65	+0.4
1,684,275	+		CCNA_01567	0.65	-0.6
1,684,275	+		CCNA_01567	0.65	-0.1
1,684,275	+		CCNA_01567	0.65	-0.6
1,684,275	+		CCNA_01567	0.65	-1.8
1,684,275	+		CCNA_01567	0.65	-0.1
1,684,278	-		CCNA_01567	0.65	-0.3
1,684,280	+		CCNA_01567	0.66	-1.0
1,684,283	-		CCNA_01567	0.66	+1.5
1,684,283	-		CCNA_01567	0.66	-0.7
1,684,288	-		CCNA_01567	0.66	-1.4
1,684,288	-		CCNA_01567	0.66	-0.3
1,684,288	-		CCNA_01567	0.66	-0.0
1,684,288	-		CCNA_01567	0.66	+2.5
1,684,290	+		CCNA_01567	0.67	-0.4
1,684,324	-		CCNA_01567	0.70	+1.5
1,684,370	-		CCNA_01567	0.74	-0.0
1,684,386	+		CCNA_01567	0.75	-2.9
1,684,448	+		CCNA_01567	0.81	-3.3
1,684,448	+		CCNA_01567	0.81	-0.0
1,684,493	+		CCNA_01567	0.85	-1.2
1,684,501	-		CCNA_01567	0.86	-1.4
1,684,505	+		CCNA_01567	0.86	-0.9
1,684,505	+		CCNA_01567	0.86	-0.3
1,684,509	-		CCNA_01567	0.87	+2.5
1,684,529	+		CCNA_01567	0.89	+0.7
1,684,561	+				+0.2
1,684,588	+				-0.8
1,684,588	+				+1.2
1,684,598	+				-1.3
1,684,606	-				-1.1
1,684,626	+				-1.9
1,684,634	-				+0.2
1,684,643	-				-0.2
1,684,645	+				-0.6
1,684,649	+				-0.6
1,684,652	+				-1.4
1,684,657	-				-1.9
1,684,740	+				-3.0
1,684,750	-				+2.5
1,684,777	-				-1.2
1,684,787	+				+2.5
1,684,795	-				-0.3
1,684,795	-				-1.6
1,684,797	+				+0.2
1,684,797	+				+2.5
1,684,797	+				+1.5
1,684,799	+				+0.3
1,684,805	-				+2.5
1,684,805	-				+0.2
1,684,805	-				+0.2
1,684,805	-				+2.5
1,684,807	-				+2.5
1,684,808	+				-0.0
1,684,808	+				-1.8
1,684,808	+				-1.2
1,684,808	+				-0.2
1,684,808	+				+0.6
1,684,816	-				-0.6
1,684,816	-				+2.5
1,684,816	-				-0.5
1,684,816	-				-1.4
1,684,816	-				+1.5
1,684,816	-				+2.5
1,684,816	-				-1.2
1,684,816	-				-2.9
1,684,823	+				-0.3
1,684,823	+				+1.3
1,684,827	+				+1.0
1,684,831	+				-0.8
1,684,831	+				-2.6
1,684,839	-				-0.0
1,684,839	-				+0.2
1,684,839	-				-0.0
1,684,839	-				+0.5
1,684,839	-				+2.5
1,684,850	+				-0.8
1,684,850	+				-0.5
1,684,850	+				-0.3
1,684,850	+				-0.8
1,684,850	+				-1.2
1,684,858	-				-0.4
1,684,858	-				+0.2
1,684,890	+				+1.0
1,684,890	+				-2.2
1,684,892	+				-1.2
1,684,892	+				+0.1
1,684,892	+				-0.5
1,684,892	+				-1.2
1,684,892	+				+0.4
1,684,900	-				+0.5
1,685,037	-		CCNA_01568	0.17	+2.5
1,685,075	-		CCNA_01568	0.20	+2.5
1,685,114	-		CCNA_01568	0.22	+0.2
1,685,124	+		CCNA_01568	0.23	+1.2
1,685,178	+		CCNA_01568	0.27	+1.5
1,685,186	-		CCNA_01568	0.28	-2.3
1,685,186	-		CCNA_01568	0.28	-1.5
1,685,186	-		CCNA_01568	0.28	-1.3
1,685,186	-		CCNA_01568	0.28	+2.5
1,685,186	-		CCNA_01568	0.28	+2.5
1,685,198	-		CCNA_01568	0.29	+2.5
1,685,275	+		CCNA_01568	0.34	-2.3
1,685,276	+		CCNA_01568	0.34	-1.2
1,685,322	+		CCNA_01568	0.38	-2.9
1,685,322	+		CCNA_01568	0.38	-1.5
1,685,322	+		CCNA_01568	0.38	+0.5
1,685,322	+		CCNA_01568	0.38	-1.7
1,685,322	+		CCNA_01568	0.38	-2.3
1,685,330	-		CCNA_01568	0.38	+0.1
1,685,330	-		CCNA_01568	0.38	-1.0
1,685,330	-		CCNA_01568	0.38	-2.1
1,685,339	-		CCNA_01568	0.39	+3.1
1,685,344	-		CCNA_01568	0.39	-2.0
1,685,391	+		CCNA_01568	0.43	+0.5
1,685,415	+		CCNA_01568	0.45	+1.5
1,685,419	-				+0.3
1,685,446	+		CCNA_01568	0.47	-0.8
1,685,448	+				-0.3
1,685,448	+		CCNA_01568	0.47	-2.2
1,685,454	-		CCNA_01568	0.47	+0.7
1,685,454	-		CCNA_01568	0.47	+0.2
1,685,456	-		CCNA_01568	0.48	+1.0
1,685,456	-		CCNA_01568	0.48	-0.0
1,685,456	-		CCNA_01568	0.48	+1.5
1,685,557	+		CCNA_01568	0.55	-2.5
1,685,583	-		CCNA_01568	0.57	-0.6
1,685,583	-		CCNA_01568	0.57	-2.9
1,685,583	-		CCNA_01568	0.57	-2.1
1,685,602	+		CCNA_01568	0.58	-0.5
1,685,619	+		CCNA_01568	0.59	-0.3
1,685,621	+		CCNA_01568	0.60	+0.1
1,685,621	+		CCNA_01568	0.60	-1.3
1,685,629	-		CCNA_01568	0.60	+0.8
1,685,629	-		CCNA_01568	0.60	-0.8
1,685,648	-		CCNA_01568	0.62	-1.5
1,685,689	+		CCNA_01568	0.65	+0.2
1,685,718	-		CCNA_01568	0.67	-1.8
1,685,771	+		CCNA_01568	0.71	+0.6
1,685,778	-		CCNA_01568	0.71	-0.8
1,685,809	+		CCNA_01568	0.73	-1.6
1,685,877	-		CCNA_01568	0.78	-2.0
1,685,879	+		CCNA_01568	0.79	-2.3
1,685,879	+		CCNA_01568	0.79	-0.3
1,685,879	+		CCNA_01568	0.79	+0.5
1,685,879	+		CCNA_01568	0.79	+0.4
1,685,882	-		CCNA_01568	0.79	-1.0
1,685,887	-		CCNA_01568	0.79	+0.9
1,685,887	-		CCNA_01568	0.79	-0.6
1,685,887	-		CCNA_01568	0.79	-2.5
1,685,947	+				-0.9
1,686,015	+		CCNA_01568	0.88	-1.1
1,686,032	+		CCNA_01568	0.90	-0.9
1,686,032	+		CCNA_01568	0.90	+0.5
1,686,165	+				-0.9
1,686,178	+				+1.7
1,686,244	-				-2.0
1,686,244	-				-1.3
1,686,293	+				-2.2
1,686,293	+				-0.7
1,686,298	+				+0.0
1,686,328	+				-2.9
1,686,333	+				-1.9
1,686,336	-				-0.5
1,686,369	+		CCNA_01569	0.12	-0.9
1,686,411	-		CCNA_01569	0.18	-1.7
1,686,425	+		CCNA_01569	0.20	+1.0
1,686,425	+		CCNA_01569	0.20	-2.7
1,686,444	+		CCNA_01569	0.22	+1.0
1,686,452	-		CCNA_01569	0.23	+0.5
1,686,457	+		CCNA_01569	0.24	-0.8
1,686,457	+		CCNA_01569	0.24	+3.5
1,686,459	-		CCNA_01569	0.24	-1.3
1,686,465	-		CCNA_01569	0.25	-2.1
1,686,465	-		CCNA_01569	0.25	+0.2
1,686,470	+		CCNA_01569	0.26	-0.5
1,686,478	-		CCNA_01569	0.27	-1.8
1,686,479	+		CCNA_01569	0.27	-2.5
1,686,527	-		CCNA_01569	0.34	+0.5
1,686,529	+		CCNA_01569	0.34	+0.2
1,686,648	-		CCNA_01569	0.50	-0.5
1,686,648	-		CCNA_01569	0.50	-1.9
1,686,674	+		CCNA_01569	0.54	+0.6
1,686,674	+		CCNA_01569	0.54	+0.2
1,686,674	+		CCNA_01569	0.54	+1.4
1,686,718	+				+1.1
1,686,726	-		CCNA_01569	0.61	-2.0
1,686,752	-		CCNA_01569	0.65	+2.5
1,686,829	-		CCNA_01569	0.76	+0.1
1,686,868	-		CCNA_01569	0.81	+0.5
1,686,897	-		CCNA_01569	0.85	-1.0
1,686,928	-		CCNA_01569	0.89	+0.7
1,687,021	+				-1.5
1,687,029	-				-1.8
1,687,066	+				+0.2
1,687,066	+				-1.2
1,687,074	-				+2.5
1,687,074	-				+1.3
1,687,074	-				+0.2
1,687,109	+				-2.1
1,687,109	+				+1.2
1,687,112	-				-0.6
1,687,166	-				+0.0