Strain Fitness in Caulobacter crescentus NA1000 around CCNA_00138

Experiment: PYE 0.5x 4C survival rep1 58 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 4C survival rep1 58 days
147,805	+		CCNA_00137	0.53	-1.0
147,842	+		CCNA_00137	0.55	-2.4
147,842	+		CCNA_00137	0.55	-0.4
147,850	-		CCNA_00137	0.56	-0.1
147,850	-		CCNA_00137	0.56	+2.2
147,922	+		CCNA_00137	0.61	-0.8
147,922	+		CCNA_00137	0.61	-1.4
147,928	+		CCNA_00137	0.61	-1.6
147,928	+		CCNA_00137	0.61	-2.3
147,928	+		CCNA_00137	0.61	+0.6
147,936	-		CCNA_00137	0.61	-1.8
147,936	-		CCNA_00137	0.61	-1.4
147,936	-		CCNA_00137	0.61	-1.2
147,936	-		CCNA_00137	0.61	-1.2
147,936	-		CCNA_00137	0.61	+1.2
147,941	-		CCNA_00137	0.62	+0.1
147,941	-		CCNA_00137	0.62	+1.2
147,960	+		CCNA_00137	0.63	-1.3
147,978	-		CCNA_00137	0.64	-1.8
148,105	-		CCNA_00137	0.72	+2.2
148,174	-		CCNA_00137	0.77	-0.3
148,328	+				-1.8
148,328	+		CCNA_00137	0.87	-1.6
148,336	-		CCNA_00137	0.87	-1.1
148,336	-				+0.2
148,336	-		CCNA_00137	0.87	+0.6
148,358	+		CCNA_00137	0.89	+1.2
148,437	-				+2.2
148,439	+				-2.3
148,441	+				-1.0
148,441	+				-1.4
148,441	+				-1.1
148,441	+				-2.3
148,441	+				-0.1
148,441	+				+2.2
148,441	+				+2.2
148,441	+				-2.7
148,441	+				+0.9
148,441	+				+1.2
148,441	+				+1.2
148,441	+				+0.2
148,441	+				-0.4
148,449	-				-2.7
148,449	-				+0.2
148,449	-				-0.1
148,449	-				-3.9
148,449	-				-1.7
148,449	-				-1.3
148,449	-				-0.8
148,449	-				-2.2
148,449	-				+2.2
148,472	+				+1.5
148,487	+				-0.4
148,547	-				-0.5
148,566	+				-0.6
148,566	+				+0.5
148,566	+				-0.4
148,566	+				-1.4
148,574	-				+1.7
148,574	-				-1.7
148,574	-				+0.2
148,575	+				-0.6
148,575	+				+0.6
148,583	-				-1.3
148,589	+				+3.2
148,596	-				+1.4
148,615	-				-0.7
148,628	+				-2.5
148,697	+				-1.7
148,728	+				+0.2
148,738	+				-0.5
148,738	+				+1.8
148,746	-				-1.0
148,818	+				+0.6
148,874	+				-0.4
148,882	-				-1.3
148,882	-				-2.5
148,889	-				+1.5
148,923	-				-1.4
148,966	+				-0.4
149,020	+		CCNA_00138	0.12	+1.2
149,044	+		CCNA_00138	0.13	-1.9
149,044	+		CCNA_00138	0.13	+0.1
149,052	-		CCNA_00138	0.14	+0.2
149,052	-		CCNA_00138	0.14	-0.9
149,052	-		CCNA_00138	0.14	+1.2
149,077	+		CCNA_00138	0.15	-1.0
149,122	+		CCNA_00138	0.17	-1.2
149,140	-		CCNA_00138	0.18	-1.2
149,140	-		CCNA_00138	0.18	-1.3
149,147	-		CCNA_00138	0.18	-0.8
149,159	-		CCNA_00138	0.19	+1.2
149,227	+		CCNA_00138	0.22	-0.4
149,240	-		CCNA_00138	0.22	-1.8
149,280	+		CCNA_00138	0.24	+0.4
149,287	+		CCNA_00138	0.24	-1.6
149,303	+		CCNA_00138	0.25	+0.1
149,303	+		CCNA_00138	0.25	-0.1
149,311	-		CCNA_00138	0.25	-0.7
149,329	+		CCNA_00138	0.26	-0.1
149,343	-		CCNA_00138	0.27	+0.3
149,356	+		CCNA_00138	0.28	-0.3
149,364	-		CCNA_00138	0.28	+0.3
149,364	-		CCNA_00138	0.28	-1.0
149,369	-		CCNA_00138	0.28	-2.8
149,374	-		CCNA_00138	0.28	-2.8
149,396	+		CCNA_00138	0.29	-0.1
149,398	-		CCNA_00138	0.29	-1.3
149,398	-		CCNA_00138	0.29	-0.8
149,405	+		CCNA_00138	0.30	-0.5
149,411	-		CCNA_00138	0.30	-2.7
149,420	+		CCNA_00138	0.30	-0.3
149,440	+		CCNA_00138	0.31	-0.1
149,447	+		CCNA_00138	0.32	-0.4
149,458	+		CCNA_00138	0.32	-1.2
149,458	+		CCNA_00138	0.32	-0.9
149,458	+		CCNA_00138	0.32	-2.9
149,459	+		CCNA_00138	0.32	-0.5
149,459	+		CCNA_00138	0.32	-0.9
149,466	-		CCNA_00138	0.33	-2.7
149,466	-		CCNA_00138	0.33	+0.4
149,479	-		CCNA_00138	0.33	-1.3
149,513	-		CCNA_00138	0.35	+0.6
149,513	-		CCNA_00138	0.35	-0.1
149,514	+		CCNA_00138	0.35	-1.8
149,536	+		CCNA_00138	0.36	+0.6
149,544	-		CCNA_00138	0.36	+2.2
149,558	+		CCNA_00138	0.37	+0.2
149,558	+		CCNA_00138	0.37	-0.5
149,558	+		CCNA_00138	0.37	-0.0
149,636	+		CCNA_00138	0.40	-1.0
149,636	+		CCNA_00138	0.40	-0.8
149,638	+		CCNA_00138	0.40	+0.1
149,644	-		CCNA_00138	0.41	-1.8
149,648	+		CCNA_00138	0.41	-1.2
149,648	+		CCNA_00138	0.41	-3.1
149,656	+		CCNA_00138	0.41	-1.2
149,656	+		CCNA_00138	0.41	-1.5
149,663	+		CCNA_00138	0.42	-0.4
149,676	+		CCNA_00138	0.42	-0.7
149,684	+		CCNA_00138	0.42	-1.1
149,804	-		CCNA_00138	0.48	-1.9
149,804	-		CCNA_00138	0.48	-0.4
149,816	+		CCNA_00138	0.49	+0.3
149,824	-		CCNA_00138	0.49	-2.2
149,841	+		CCNA_00138	0.50	+0.0
149,841	+		CCNA_00138	0.50	-0.2
149,841	+		CCNA_00138	0.50	+0.0
149,849	-		CCNA_00138	0.50	-3.1
149,864	+				+2.2
149,913	+		CCNA_00138	0.53	-0.6
149,913	+		CCNA_00138	0.53	+1.1
149,913	+		CCNA_00138	0.53	-0.5
149,944	+		CCNA_00138	0.54	+0.5
150,002	+		CCNA_00138	0.57	+0.4
150,017	-				-2.6
150,034	+		CCNA_00138	0.58	+0.3
150,034	+		CCNA_00138	0.58	-2.4
150,038	+		CCNA_00138	0.59	+0.8
150,042	-		CCNA_00138	0.59	+0.1
150,089	+		CCNA_00138	0.61	-2.3
150,097	+		CCNA_00138	0.61	-2.7
150,120	-		CCNA_00138	0.62	-1.3
150,150	-		CCNA_00138	0.64	+0.7
150,165	+		CCNA_00138	0.64	-0.3
150,165	+		CCNA_00138	0.64	-1.5
150,173	-		CCNA_00138	0.65	+1.2
150,178	-		CCNA_00138	0.65	+0.6
150,184	+		CCNA_00138	0.65	+0.3
150,193	-		CCNA_00138	0.66	+0.6
150,197	+		CCNA_00138	0.66	+0.1
150,205	-		CCNA_00138	0.66	+0.6
150,213	+		CCNA_00138	0.67	-0.1
150,227	-		CCNA_00138	0.67	-1.3
150,265	+		CCNA_00138	0.69	-0.1
150,269	+		CCNA_00138	0.69	+0.7
150,282	+		CCNA_00138	0.70	+0.7
150,283	-		CCNA_00138	0.70	-3.0
150,299	-		CCNA_00138	0.71	-0.4
150,332	-		CCNA_00138	0.72	-3.5
150,347	+		CCNA_00138	0.73	+1.0
150,355	-		CCNA_00138	0.73	-0.1
150,355	-		CCNA_00138	0.73	-1.2
150,417	+		CCNA_00138	0.76	+0.3
150,417	+		CCNA_00138	0.76	+0.4
150,417	+		CCNA_00138	0.76	+0.7
150,420	-		CCNA_00138	0.76	-1.7
150,425	-		CCNA_00138	0.76	-0.8
150,439	+		CCNA_00138	0.77	+0.7
150,439	+		CCNA_00138	0.77	+0.6
150,450	+		CCNA_00138	0.77	+0.3
150,471	-		CCNA_00138	0.78	-0.1
150,497	-		CCNA_00138	0.80	-0.1
150,502	-		CCNA_00138	0.80	-1.5
150,525	+		CCNA_00138	0.81	+0.3
150,525	+		CCNA_00138	0.81	+0.4
150,533	-		CCNA_00138	0.81	-0.6
150,533	-		CCNA_00138	0.81	-1.2
150,568	+		CCNA_00138	0.83	+0.5
150,576	-		CCNA_00138	0.83	-0.8
150,582	-		CCNA_00138	0.83	+0.2
150,591	-		CCNA_00138	0.84	-1.3
150,612	+		CCNA_00138	0.85	-0.4
150,612	+		CCNA_00138	0.85	+0.3
150,669	-		CCNA_00138	0.87	-0.4
150,685	+		CCNA_00138	0.88	-1.3
150,711	-		CCNA_00138	0.89	-0.1
150,718	+		CCNA_00138	0.90	+0.5
150,723	+		CCNA_00138	0.90	+0.0
150,726	-				-1.4
150,731	-				-1.3
150,736	-				-0.3
150,828	+				+0.4
150,828	+				-1.4
150,828	+				-0.5
150,833	+				-1.4
150,833	+				-3.9
150,841	-				+0.1
150,841	-				-0.0
150,841	-				-0.3
150,841	-				+0.6
150,871	-				-1.2
150,874	-				-0.4
150,889	+				-0.1
150,889	+				+0.0
150,889	+				+0.8
150,897	-				-0.3
150,922	-				-0.2
151,099	-				+0.1
151,113	+				+1.1
151,113	+				+0.7
151,127	-				+0.4
151,156	+		CCNA_00139	0.10	+0.4
151,156	+		CCNA_00139	0.10	+0.5
151,164	-		CCNA_00139	0.11	-0.7
151,201	-		CCNA_00139	0.13	-0.3
151,227	-		CCNA_00139	0.15	+0.2
151,234	+		CCNA_00139	0.15	+0.3
151,247	-		CCNA_00139	0.16	-1.0
151,247	-		CCNA_00139	0.16	+0.5
151,258	+		CCNA_00139	0.16	+0.2
151,308	+		CCNA_00139	0.20	+0.2
151,308	+		CCNA_00139	0.20	+0.1
151,316	-		CCNA_00139	0.20	-0.8
151,316	-		CCNA_00139	0.20	-0.3
151,357	+		CCNA_00139	0.23	-0.2
151,357	+		CCNA_00139	0.23	-0.4
151,365	-		CCNA_00139	0.23	-1.9
151,365	-		CCNA_00139	0.23	-1.5
151,370	-		CCNA_00139	0.23	-1.3
151,403	-		CCNA_00139	0.25	+0.6
151,490	+		CCNA_00139	0.31	+0.1
151,492	+		CCNA_00139	0.31	+0.9
151,584	+		CCNA_00139	0.37	-1.9
151,585	+		CCNA_00139	0.37	+0.5
151,590	-		CCNA_00139	0.37	+0.8
151,600	+		CCNA_00139	0.38	+0.5
151,630	+		CCNA_00139	0.40	-2.2
151,630	+		CCNA_00139	0.40	-0.5
151,657	-		CCNA_00139	0.41	+0.0
151,668	+		CCNA_00139	0.42	-1.6
151,668	+		CCNA_00139	0.42	-1.2
151,676	-		CCNA_00139	0.42	+0.3
151,702	+		CCNA_00139	0.44	-2.3
151,749	+		CCNA_00139	0.47	-0.9
151,753	-		CCNA_00139	0.47	+1.8
151,762	+		CCNA_00139	0.48	+0.0
151,770	-		CCNA_00139	0.48	-0.1
151,772	+		CCNA_00139	0.48	+1.0
151,775	-		CCNA_00139	0.49	-0.6
151,781	+		CCNA_00139	0.49	+1.4
151,799	-		CCNA_00139	0.50	+0.9
151,845	-		CCNA_00139	0.53	-0.7
151,870	+		CCNA_00139	0.55	+1.7
151,872	+		CCNA_00139	0.55	-0.4
151,878	-		CCNA_00139	0.55	+0.6
151,890	+		CCNA_00139	0.56	-0.6
151,898	-		CCNA_00139	0.56	+0.9
151,898	-		CCNA_00139	0.56	+1.1
151,901	+		CCNA_00139	0.56	+0.2
151,912	+		CCNA_00139	0.57	+0.3
151,936	-		CCNA_00139	0.59	-0.5
151,936	-		CCNA_00139	0.59	-0.6