Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS27600
Experiment: copper (II) chloride 3 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | copper (II) chloride 3 mM |
---|---|---|---|---|---|
remove | |||||
5,729,699 | - | BWI76_RS27595 | 0.65 | +0.2 | |
5,729,754 | + | BWI76_RS27595 | 0.69 | -0.2 | |
5,729,764 | + | BWI76_RS27595 | 0.69 | +0.1 | |
5,729,767 | - | BWI76_RS27595 | 0.70 | -0.9 | |
5,729,792 | - | BWI76_RS27595 | 0.71 | -1.1 | |
5,729,820 | + | BWI76_RS27595 | 0.73 | -0.5 | |
5,729,820 | + | BWI76_RS27595 | 0.73 | -0.2 | |
5,729,820 | + | BWI76_RS27595 | 0.73 | -0.1 | |
5,729,820 | + | BWI76_RS27595 | 0.73 | +0.2 | |
5,729,828 | - | BWI76_RS27595 | 0.74 | -0.3 | |
5,729,847 | - | -0.7 | |||
5,729,865 | + | BWI76_RS27595 | 0.77 | +0.1 | |
5,729,895 | + | BWI76_RS27595 | 0.79 | -0.2 | |
5,729,903 | - | BWI76_RS27595 | 0.79 | -0.3 | |
5,730,549 | - | BWI76_RS27600 | 0.71 | +0.5 | |
5,730,559 | - | BWI76_RS27600 | 0.81 | +0.3 | |
5,730,559 | - | BWI76_RS27600 | 0.81 | +0.4 | |
5,730,602 | - | +0.6 | |||
5,730,673 | - | BWI76_RS27605 | 0.30 | -1.2 | |
5,730,689 | + | BWI76_RS27605 | 0.39 | +0.0 | |
5,730,856 | + | -0.5 | |||
5,730,866 | + | +0.1 | |||
5,730,987 | - | +0.5 | |||
5,731,123 | - | -0.8 | |||
5,731,161 | + | -0.1 | |||
5,731,265 | + | BWI76_RS27610 | 0.26 | -0.0 | |
5,731,273 | - | BWI76_RS27610 | 0.27 | +0.0 | |
5,731,298 | + | BWI76_RS27610 | 0.32 | -0.2 | |
5,731,576 | - | BWI76_RS27610 | 0.86 | +0.1 |
Or see this region's nucleotide sequence